BLASTX nr result
ID: Jatropha_contig00036608
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00036608
(729 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm... 130 4e-28
ref|NP_568218.1| transcription elongation factor (TFIIS) family ... 98 3e-18
dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana] 98 3e-18
ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Caps... 96 9e-18
dbj|BAJ33751.1| unnamed protein product [Thellungiella halophila... 96 1e-17
ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp.... 95 3e-17
ref|XP_002329469.1| predicted protein [Populus trichocarpa] gi|5... 93 1e-16
gb|ESR41113.1| hypothetical protein CICLE_v10025964mg [Citrus cl... 92 2e-16
gb|ESR41112.1| hypothetical protein CICLE_v10025964mg [Citrus cl... 92 2e-16
gb|ESR41111.1| hypothetical protein CICLE_v10025964mg [Citrus cl... 92 2e-16
ref|XP_002300207.1| predicted protein [Populus trichocarpa] gi|2... 92 2e-16
gb|EOY19920.1| Transcription elongation factor (TFIIS) family pr... 90 6e-16
gb|EOY19919.1| Transcription elongation factor (TFIIS) family pr... 90 6e-16
gb|EOX92591.1| Transcription elongation factor (TFIIS) family pr... 90 8e-16
gb|ESW09677.1| hypothetical protein PHAVU_009G146900g [Phaseolus... 88 2e-15
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 87 7e-15
ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262... 86 9e-15
gb|EMJ06713.1| hypothetical protein PRUPE_ppa008362mg [Prunus pe... 85 2e-14
ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804... 84 3e-14
ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790... 84 6e-14
>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
gi|223530431|gb|EEF32318.1| conserved hypothetical
protein [Ricinus communis]
Length = 362
Score = 130 bits (327), Expect = 4e-28
Identities = 63/73 (86%), Positives = 70/73 (95%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSSDGRCRNCDF 688
MD+DDFRSILESSGVDVWTFI+TAI+VAS DFG+ELK+RRDKIVEMLYSSS GRCRNCD
Sbjct: 1 MDVDDFRSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYSSS-GRCRNCDL 59
Query: 689 DVGRINDGHEMKE 727
DVGRIN+GHE+KE
Sbjct: 60 DVGRINNGHEIKE 72
>ref|NP_568218.1| transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana] gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName:
Full=Probable mediator of RNA polymerase II
transcription subunit 26c gi|332004072|gb|AED91455.1|
transcription elongation factor (TFIIS) family protein
[Arabidopsis thaliana]
Length = 353
Score = 97.8 bits (242), Expect = 3e-18
Identities = 47/83 (56%), Positives = 63/83 (75%), Gaps = 10/83 (12%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS-DGRCRNCD 685
MD+DDFRS+++++GVDVWTFI+TAI+VAS D+G ELKRRRD IVE LY++S +CRNCD
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 686 FD---------VGRINDGHEMKE 727
F +GR+N+G +E
Sbjct: 61 FGGGGNVTEAAIGRVNNGRVHEE 83
>dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana]
Length = 361
Score = 97.8 bits (242), Expect = 3e-18
Identities = 47/83 (56%), Positives = 63/83 (75%), Gaps = 10/83 (12%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS-DGRCRNCD 685
MD+DDFRS+++++GVDVWTFI+TAI+VAS D+G ELKRRRD IVE LY++S +CRNCD
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 686 FD---------VGRINDGHEMKE 727
F +GR+N+G +E
Sbjct: 61 FGGGGNVTEAAIGRVNNGRVHEE 83
>ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Capsella rubella]
gi|482556752|gb|EOA20944.1| hypothetical protein
CARUB_v10001280mg [Capsella rubella]
Length = 355
Score = 96.3 bits (238), Expect = 9e-18
Identities = 48/76 (63%), Positives = 59/76 (77%), Gaps = 10/76 (13%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS-DGRCRNCD 685
MD+DDFRSI+E++GVDVWTFI+TAI+VAS D+G ELKRRRD IVE LY++S +CRNCD
Sbjct: 1 MDLDDFRSIMENAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 686 FD---------VGRIN 706
F VGR+N
Sbjct: 61 FGGGGTVTEAAVGRVN 76
>dbj|BAJ33751.1| unnamed protein product [Thellungiella halophila]
gi|557100558|gb|ESQ40921.1| hypothetical protein
EUTSA_v10013991mg [Eutrema salsugineum]
Length = 348
Score = 95.9 bits (237), Expect = 1e-17
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS-DGRCRNCD 685
MD+DDFRSI++++GVDVWTFI+TAI+VAS D+G ELKRRRD IVE LY++S +CRNCD
Sbjct: 1 MDLDDFRSIMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 686 FDVGRI 703
F G I
Sbjct: 61 FGSGGI 66
>ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319264|gb|EFH49686.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 364
Score = 94.7 bits (234), Expect = 3e-17
Identities = 46/76 (60%), Positives = 59/76 (77%), Gaps = 10/76 (13%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS-DGRCRNCD 685
MD+DDFRS+++++GVDVWTFI+TAI+VAS D+G ELKRRRD IVE LY++S +CRNCD
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 686 FD---------VGRIN 706
F VGR+N
Sbjct: 61 FGGGGSVTEAAVGRVN 76
>ref|XP_002329469.1| predicted protein [Populus trichocarpa] gi|550316504|gb|ERP48720.1|
hypothetical protein POPTR_0019s01790g [Populus
trichocarpa]
Length = 357
Score = 92.8 bits (229), Expect = 1e-16
Identities = 51/77 (66%), Positives = 60/77 (77%), Gaps = 5/77 (6%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLY--SSSDGRCRN- 679
MDIDDFR ILESSGVDVWTFI+TAI+VAS DFGSELKRRRD IVE L+ SSS RCR+
Sbjct: 1 MDIDDFRLILESSGVDVWTFIDTAIVVASLDFGSELKRRRDDIVERLFASSSSCSRCRDR 60
Query: 680 --CDFDVGRINDGHEMK 724
D ++ ++G E+K
Sbjct: 61 SLNDINMNNTSNGDEIK 77
>gb|ESR41113.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
Length = 353
Score = 92.0 bits (227), Expect = 2e-16
Identities = 44/72 (61%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS-DGRCRNCD 685
MD++DFRSIL+++GVDVWTFI+TAI+VAS D+ +ELK RRDKIVE LY++ RCRNCD
Sbjct: 1 MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
Query: 686 FDVGRINDGHEM 721
F G ++ E+
Sbjct: 61 FGNGVVDVNKEI 72
>gb|ESR41112.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
Length = 286
Score = 92.0 bits (227), Expect = 2e-16
Identities = 44/72 (61%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS-DGRCRNCD 685
MD++DFRSIL+++GVDVWTFI+TAI+VAS D+ +ELK RRDKIVE LY++ RCRNCD
Sbjct: 1 MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
Query: 686 FDVGRINDGHEM 721
F G ++ E+
Sbjct: 61 FGNGVVDVNKEI 72
>gb|ESR41111.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
Length = 218
Score = 92.0 bits (227), Expect = 2e-16
Identities = 44/72 (61%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS-DGRCRNCD 685
MD++DFRSIL+++GVDVWTFI+TAI+VAS D+ +ELK RRDKIVE LY++ RCRNCD
Sbjct: 1 MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
Query: 686 FDVGRINDGHEM 721
F G ++ E+
Sbjct: 61 FGNGVVDVNKEI 72
>ref|XP_002300207.1| predicted protein [Populus trichocarpa] gi|222847465|gb|EEE85012.1|
hypothetical protein POPTR_0001s31510g [Populus
trichocarpa]
Length = 361
Score = 91.7 bits (226), Expect = 2e-16
Identities = 53/78 (67%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLY--SSSDGRCRNC 682
MDIDDFRSILESSGVDVW FI+TAI VAS DFGSELKRRRD IV L+ SSS RCR+
Sbjct: 1 MDIDDFRSILESSGVDVWNFIDTAIDVASLDFGSELKRRRDDIVARLFAASSSCSRCRDR 60
Query: 683 DFDVGRIN---DGHEMKE 727
FD IN +G+ MK+
Sbjct: 61 SFDDIDINNTANGNGMKD 78
>gb|EOY19920.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 2, partial [Theobroma cacao]
Length = 300
Score = 90.1 bits (222), Expect = 6e-16
Identities = 43/74 (58%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS-DGRCRNCD 685
MD+DDFRS+LE++GVDVWTFI++AI+VAS D+G ELK+RRD IVE LY++S RC++CD
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSCD 60
Query: 686 FDVGRINDGHEMKE 727
F G ++G+++ +
Sbjct: 61 F--GERSNGYQVNK 72
>gb|EOY19919.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao]
Length = 337
Score = 90.1 bits (222), Expect = 6e-16
Identities = 43/74 (58%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS-DGRCRNCD 685
MD+DDFRS+LE++GVDVWTFI++AI+VAS D+G ELK+RRD IVE LY++S RC++CD
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSCD 60
Query: 686 FDVGRINDGHEMKE 727
F G ++G+++ +
Sbjct: 61 F--GERSNGYQVNK 72
>gb|EOX92591.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao] gi|508700696|gb|EOX92592.1|
Transcription elongation factor (TFIIS) family protein,
putative isoform 1 [Theobroma cacao]
Length = 336
Score = 89.7 bits (221), Expect = 8e-16
Identities = 42/61 (68%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS-DGRCRNCD 685
MD+DDFRS+LE++ VDVWTFI+TAI+VAS D+G ELK+RRD+IVE LY++S +CRNCD
Sbjct: 1 MDLDDFRSVLETAEVDVWTFIDTAILVASLDYGPELKQRRDRIVERLYATSMVTQCRNCD 60
Query: 686 F 688
F
Sbjct: 61 F 61
>gb|ESW09677.1| hypothetical protein PHAVU_009G146900g [Phaseolus vulgaris]
Length = 353
Score = 88.2 bits (217), Expect = 2e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSSDG--RCRNC 682
MD+DDFRSIL++SGVDVW FI+ AI VASAD +ELKRRRD IVE LYS++ RCRNC
Sbjct: 1 MDLDDFRSILDTSGVDVWMFIDAAIAVASADCAAELKRRRDSIVESLYSATAAPPRCRNC 60
Query: 683 DFDVGRINDGHEMK 724
D DGH ++
Sbjct: 61 D-------DGHLLR 67
>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
gi|449528150|ref|XP_004171069.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Cucumis sativus]
Length = 345
Score = 86.7 bits (213), Expect = 7e-15
Identities = 43/70 (61%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLY--SSSDGRCRNC 682
+D+DDFR+IL+++GVDVWTFI+TA+ VAS D+G++LK RRD IVE LY +S RCRNC
Sbjct: 4 LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNC 63
Query: 683 DFDVGRINDG 712
D D R +DG
Sbjct: 64 DTD--RNHDG 71
>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product
[Vitis vinifera]
Length = 332
Score = 86.3 bits (212), Expect = 9e-15
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSSDGRCRNCDF 688
MD D+FRSILESSGVDVWT IETA+ VAS D+ E K RRD IVE LY+ RC NCD
Sbjct: 1 MDCDEFRSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLYTPVVSRCLNCDR 60
Query: 689 D-VGRINDGHEMKE 727
D + + N +KE
Sbjct: 61 DRIHKPNGDRSVKE 74
>gb|EMJ06713.1| hypothetical protein PRUPE_ppa008362mg [Prunus persica]
Length = 335
Score = 85.1 bits (209), Expect = 2e-14
Identities = 42/63 (66%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSS--DGRCRNC 682
MD DD R+ILE+SGVDVWTFI+TAI+VAS D+G+ELK RRD IVE LY+++ RC NC
Sbjct: 1 MDHDDLRTILETSGVDVWTFIDTAIVVASVDYGTELKHRRDGIVERLYATTCMPPRCPNC 60
Query: 683 DFD 691
D D
Sbjct: 61 DTD 63
>ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804034 [Glycine max]
Length = 361
Score = 84.3 bits (207), Expect = 3e-14
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSSDG--RCRNC 682
MD+DDFRS+L+++GVDVW FI+ AI VASAD ELKRRRD IVE LY+++ +CR C
Sbjct: 1 MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60
Query: 683 DFDVGRINDGHEMKE 727
D D G +GH++K+
Sbjct: 61 D-DGGNDLNGHQIKK 74
>ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790582 [Glycine max]
Length = 356
Score = 83.6 bits (205), Expect = 6e-14
Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Frame = +2
Query: 509 MDIDDFRSILESSGVDVWTFIETAIMVASADFGSELKRRRDKIVEMLYSSSDGR--CRNC 682
MD+DDFRSIL+++GVDVW FI+ AI VAS+D +LKRRRD IVE LY+++ CRNC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60
Query: 683 DFDVGRINDGHEMKE 727
D R+N GH +K+
Sbjct: 61 DEGGHRLN-GHRIKK 74