BLASTX nr result

ID: Jatropha_contig00036553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00036553
         (602 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532273.1| Shikimate kinase, chloroplast precursor, put...    72   8e-11
gb|EEE94126.2| shikimate kinase family protein [Populus trichoca...    70   5e-10
ref|XP_002307130.1| shikimate kinase [Populus trichocarpa]             70   5e-10
ref|XP_002310602.1| shikimate kinase [Populus trichocarpa] gi|22...    67   3e-09
gb|EMJ06821.1| hypothetical protein PRUPE_ppa009120mg [Prunus pe...    56   6e-06

>ref|XP_002532273.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
           communis] gi|223528033|gb|EEF30113.1| Shikimate kinase,
           chloroplast precursor, putative [Ricinus communis]
          Length = 313

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 37/76 (48%), Positives = 48/76 (63%)
 Frame = +2

Query: 179 MDVKFVGRMQLSSTWIDCGRVTPKLPTGSLRLSRKLKEKQRLQVGFSADIQSTTNKNRHG 358
           M+ K +  MQLS+TW+D   +  +    SL  SRK KEKQRL V  S   + T+NK RH 
Sbjct: 1   MEAKLLKGMQLSTTWVDLDNLARRNSACSLSFSRKSKEKQRLHVVVSTQFRPTSNKYRHA 60

Query: 359 SVSFKVSCSYQNFPGS 406
           S+S +VSCSY+N P S
Sbjct: 61  SISSEVSCSYKNSPVS 76


>gb|EEE94126.2| shikimate kinase family protein [Populus trichocarpa]
          Length = 294

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 37/72 (51%), Positives = 48/72 (66%)
 Frame = +2

Query: 179 MDVKFVGRMQLSSTWIDCGRVTPKLPTGSLRLSRKLKEKQRLQVGFSADIQSTTNKNRHG 358
           M+  F  RMQ+S+TWID G +  K PTG LR S +LKE++RLQV  SA  +   ++NRH 
Sbjct: 1   MEGNFAQRMQISTTWIDTGNLARK-PTGFLRFSGRLKEQKRLQVFVSAQFRPVRDENRHR 59

Query: 359 SVSFKVSCSYQN 394
             SF+VS SY N
Sbjct: 60  LASFEVSRSYNN 71


>ref|XP_002307130.1| shikimate kinase [Populus trichocarpa]
          Length = 286

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 37/72 (51%), Positives = 48/72 (66%)
 Frame = +2

Query: 179 MDVKFVGRMQLSSTWIDCGRVTPKLPTGSLRLSRKLKEKQRLQVGFSADIQSTTNKNRHG 358
           M+  F  RMQ+S+TWID G +  K PTG LR S +LKE++RLQV  SA  +   ++NRH 
Sbjct: 1   MEGNFAQRMQISTTWIDTGNLARK-PTGFLRFSGRLKEQKRLQVFVSAQFRPVRDENRHR 59

Query: 359 SVSFKVSCSYQN 394
             SF+VS SY N
Sbjct: 60  LASFEVSRSYNN 71


>ref|XP_002310602.1| shikimate kinase [Populus trichocarpa] gi|222853505|gb|EEE91052.1|
           shikimate kinase family protein [Populus trichocarpa]
          Length = 294

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/72 (47%), Positives = 46/72 (63%)
 Frame = +2

Query: 179 MDVKFVGRMQLSSTWIDCGRVTPKLPTGSLRLSRKLKEKQRLQVGFSADIQSTTNKNRHG 358
           M+     RMQ+S+TWID  +  P+ PT SLR S + KE++RLQV  SA  +   ++NRH 
Sbjct: 1   MEANLAQRMQISTTWIDSYKF-PRKPTSSLRFSGRFKEQKRLQVFVSAQFRPVRDENRHR 59

Query: 359 SVSFKVSCSYQN 394
             SF+VSCS  N
Sbjct: 60  QASFEVSCSCNN 71


>gb|EMJ06821.1| hypothetical protein PRUPE_ppa009120mg [Prunus persica]
          Length = 306

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 32/79 (40%), Positives = 47/79 (59%)
 Frame = +2

Query: 179 MDVKFVGRMQLSSTWIDCGRVTPKLPTGSLRLSRKLKEKQRLQVGFSADIQSTTNKNRHG 358
           M+     R+Q S TWID  +V  + P+ S R S++LKE+ +L+V  +A + S+   NR  
Sbjct: 4   MEATVAHRLQFS-TWIDSEKVARR-PSSSARCSQRLKEQNKLRVLVAAHLPSSRVSNRQR 61

Query: 359 SVSFKVSCSYQNFPGSQPE 415
            V+ +VSCSY  FP S  E
Sbjct: 62  HVALEVSCSYNKFPASTVE 80


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