BLASTX nr result

ID: Jatropha_contig00036454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00036454
         (683 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524891.1| ring finger containing protein, putative [Ri...   102   1e-19
ref|XP_002318535.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-10
gb|EEF05620.2| hypothetical protein POPTR_0015s03970g [Populus t...    70   4e-10
ref|XP_003530938.1| PREDICTED: uncharacterized protein LOC100819...    66   8e-09

>ref|XP_002524891.1| ring finger containing protein, putative [Ricinus communis]
           gi|223535854|gb|EEF37515.1| ring finger containing
           protein, putative [Ricinus communis]
          Length = 411

 Score =  102 bits (253), Expect = 1e-19
 Identities = 59/108 (54%), Positives = 61/108 (56%)
 Frame = +2

Query: 161 MPVFTEXXXXXXTIAEHIKLRRSRNHFYHNQQQGEIPTILTETDPTPHXXXXXXXXXXXX 340
           M VFTE      TIAE IKLRR RN F+H QQ+  I T  TETDP P             
Sbjct: 1   MSVFTETNSSTSTIAEQIKLRRPRNQFHHQQQEMPISTTETETDPNPQMSRSSKSTISSL 60

Query: 341 XXXPFSXXXXXXXXXXXXXPFRGLGCTAGAAQQVSVPAVIRSSAEWEG 484
              PFS              FRGLGCTAGAAQQVSVPAVIRSSAEWEG
Sbjct: 61  FLSPFSTEPTTKKKGTA---FRGLGCTAGAAQQVSVPAVIRSSAEWEG 105


>ref|XP_002318535.1| predicted protein [Populus trichocarpa] gi|222859208|gb|EEE96755.1|
           zinc finger family protein [Populus trichocarpa]
          Length = 389

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 51/111 (45%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
 Frame = +2

Query: 161 MPVFTEXXXXXXT-IAEHIKLRRSRNHFYHNQQQGEIPTILTETDPTPHXXXXXXXXXXX 337
           MPVF E        IA+ IKLR+ R+       Q E+  I TETDP PH           
Sbjct: 1   MPVFAESSSSTPAAIADQIKLRKPRS-------QQELQPISTETDPNPHASKSSKSNTII 53

Query: 338 XXXXP--FSXXXXXXXXXXXXXPFRGLGCTAGAAQQVSVPAVIRSSAEWEG 484
                  FS              FRGLGCTAGAAQQVSVPAVIRSSA+WEG
Sbjct: 54  SSLFHSHFSTTPPDQSKKKGAT-FRGLGCTAGAAQQVSVPAVIRSSADWEG 103


>gb|EEF05620.2| hypothetical protein POPTR_0015s03970g [Populus trichocarpa]
          Length = 378

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 49/109 (44%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
 Frame = +2

Query: 161 MPVFTEXXXXXXTIAEHIKLRRSRNHFYHNQQQGEIPTILTETDPTPHXXXXXXXXXXXX 340
           MPVF E      TIA+ IKLR+ R          E+  I TETDP PH            
Sbjct: 1   MPVFAESSNT--TIADQIKLRKHR----------ELQPIATETDPNPHISRTSKSNTIIS 48

Query: 341 XXX-PFSXXXXXXXXXXXXXPFRGLGCTAGAAQQVSVPAVIRSSAEWEG 484
                                FRGLGCTAGAAQQVSVPAVIRSSA WEG
Sbjct: 49  SLFHSHFTATPPDQTKKKGATFRGLGCTAGAAQQVSVPAVIRSSAGWEG 97


>ref|XP_003530938.1| PREDICTED: uncharacterized protein LOC100819907 [Glycine max]
          Length = 377

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 43/116 (37%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
 Frame = +2

Query: 197 TIAEHIKLRRSRNHFYHNQQQGEIPTILTETDPTPHXXXXXXXXXXXXXXXPF------- 355
           T+AEHIK RR RN F H+Q        ++ETDP P                         
Sbjct: 10  TVAEHIKWRRPRNQFNHHQHP------ISETDPNPQIPSIIQSTRCKSTISSLLLSTFSN 63

Query: 356 -------------SXXXXXXXXXXXXXPFRGLGCTAGAAQQVSVPAVIRSSAEWEG 484
                        +              FRGLGCTAGA+QQVSVPAVIRSSA+W+G
Sbjct: 64  NTSSNNDTPTTFNATAHSKKKSNFSASTFRGLGCTAGASQQVSVPAVIRSSADWQG 119


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