BLASTX nr result
ID: Jatropha_contig00036397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00036397
(677 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [... 58 3e-10
gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe... 59 7e-10
gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe... 59 7e-10
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 57 7e-10
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 59 1e-09
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 59 1e-09
gb|EEE87831.2| hypothetical protein POPTR_0009s09860g [Populus t... 56 6e-09
ref|XP_002313876.1| predicted protein [Populus trichocarpa] 56 6e-09
gb|ESR36165.1| hypothetical protein CICLE_v10028283mg [Citrus cl... 58 2e-08
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 51 5e-08
gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theob... 53 1e-07
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 48 2e-06
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit... 47 5e-06
>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 536
Score = 58.2 bits (139), Expect(2) = 3e-10
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIGIK S DELAASCLSYDYSEPPRLV
Sbjct: 266 QGGIGIKSSFDELAASCLSYDYSEPPRLV 294
Score = 32.7 bits (73), Expect(2) = 3e-10
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +3
Query: 57 HCPKFEC---RDFFLG*DDIIIVVNKPPGIPVQ 146
HC + E R L D+ IIVVNKPPG+PVQ
Sbjct: 234 HCGEKEANFIRGLELYKDEAIIVVNKPPGMPVQ 266
>gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
Length = 483
Score = 59.3 bits (142), Expect(2) = 7e-10
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIGIKRSLDELAA+CLSYD+SEPPRLV
Sbjct: 212 QGGIGIKRSLDELAAACLSYDFSEPPRLV 240
Score = 30.4 bits (67), Expect(2) = 7e-10
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 99 DDIIIVVNKPPGIPVQ 146
D IIV+NKPPG+PVQ
Sbjct: 197 DPAIIVINKPPGMPVQ 212
>gb|EMJ01008.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
Length = 481
Score = 59.3 bits (142), Expect(2) = 7e-10
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIGIKRSLDELAA+CLSYD+SEPPRLV
Sbjct: 212 QGGIGIKRSLDELAAACLSYDFSEPPRLV 240
Score = 30.4 bits (67), Expect(2) = 7e-10
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 99 DDIIIVVNKPPGIPVQ 146
D IIV+NKPPG+PVQ
Sbjct: 197 DPAIIVINKPPGMPVQ 212
>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 476
Score = 56.6 bits (135), Expect(2) = 7e-10
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIGIKRSLDELAA+CLSYD S+PPRLV
Sbjct: 195 QGGIGIKRSLDELAATCLSYDLSQPPRLV 223
Score = 33.1 bits (74), Expect(2) = 7e-10
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 57 HCPKFEC---RDFFLG*DDIIIVVNKPPGIPVQ 146
HC + E R L D IIV+NKPPG+PVQ
Sbjct: 163 HCSEEEAEFIRSLVLYKDPAIIVINKPPGLPVQ 195
>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
sativus]
Length = 471
Score = 58.9 bits (141), Expect(2) = 1e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIG+KRSLDELAASCLSY YSEPPRLV
Sbjct: 206 QGGIGVKRSLDELAASCLSYGYSEPPRLV 234
Score = 30.0 bits (66), Expect(2) = 1e-09
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 99 DDIIIVVNKPPGIPVQ 146
D I+V+NKPPG+PVQ
Sbjct: 191 DPAILVINKPPGLPVQ 206
>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
sativus]
Length = 466
Score = 58.9 bits (141), Expect(2) = 1e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIG+KRSLDELAASCLSY YSEPPRLV
Sbjct: 201 QGGIGVKRSLDELAASCLSYGYSEPPRLV 229
Score = 30.0 bits (66), Expect(2) = 1e-09
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 99 DDIIIVVNKPPGIPVQ 146
D I+V+NKPPG+PVQ
Sbjct: 186 DPAILVINKPPGLPVQ 201
>gb|EEE87831.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
Length = 471
Score = 55.8 bits (133), Expect(2) = 6e-09
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIGIKRSLDEL+ASC S DYSEPPRLV
Sbjct: 201 QGGIGIKRSLDELSASCFSSDYSEPPRLV 229
Score = 30.8 bits (68), Expect(2) = 6e-09
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 57 HCPKFEC---RDFFLG*DDIIIVVNKPPGIPVQ 146
HC + E R L D IIVVNKPPG+PVQ
Sbjct: 169 HCNEEEINFIRGLELYKDAAIIVVNKPPGMPVQ 201
>ref|XP_002313876.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 55.8 bits (133), Expect(2) = 6e-09
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIGIKRSLDEL+ASC S DYSEPPRLV
Sbjct: 56 QGGIGIKRSLDELSASCFSSDYSEPPRLV 84
Score = 30.8 bits (68), Expect(2) = 6e-09
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 57 HCPKFEC---RDFFLG*DDIIIVVNKPPGIPVQ 146
HC + E R L D IIVVNKPPG+PVQ
Sbjct: 24 HCNEEEINFIRGLELYKDAAIIVVNKPPGMPVQ 56
>gb|ESR36165.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
Length = 494
Score = 57.8 bits (138), Expect(2) = 2e-08
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIGI+RS+DELAA+CL+YDYSEPPRLV
Sbjct: 223 QGGIGIRRSIDELAATCLTYDYSEPPRLV 251
Score = 27.3 bits (59), Expect(2) = 2e-08
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 99 DDIIIVVNKPPGIPVQ 146
D IIV+NKP G+PVQ
Sbjct: 208 DSAIIVINKPHGMPVQ 223
>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
product [Vitis vinifera]
Length = 476
Score = 51.2 bits (121), Expect(2) = 5e-08
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIGIKRSLDELAA+ L YD SEPPRLV
Sbjct: 205 QGGIGIKRSLDELAATYLRYDCSEPPRLV 233
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 54 YHCPKFECR---DFFLG*DDIIIVVNKPPGIPVQ 146
YHC E + L D IIVVNKPPG+PVQ
Sbjct: 172 YHCNDEEINFVHNLELYKDPAIIVVNKPPGLPVQ 205
>gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
Length = 477
Score = 52.8 bits (125), Expect(2) = 1e-07
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIGIK SLD+LAA+CL +DYSEPPRLV
Sbjct: 206 QGGIGIKWSLDKLAAACLCFDYSEPPRLV 234
Score = 29.6 bits (65), Expect(2) = 1e-07
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 99 DDIIIVVNKPPGIPVQ 146
D IIV+NKPPG+PVQ
Sbjct: 191 DPAIIVLNKPPGMPVQ 206
>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
lycopersicum]
Length = 467
Score = 48.1 bits (113), Expect(2) = 2e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIGIKRSLDELAA +S+ YSE PRLV
Sbjct: 196 QGGIGIKRSLDELAAKYMSHQYSEAPRLV 224
Score = 29.6 bits (65), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 99 DDIIIVVNKPPGIPVQ 146
D IIVVNKPPG+PVQ
Sbjct: 181 DAEIIVVNKPPGMPVQ 196
>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
[Solanum tuberosum]
Length = 467
Score = 47.0 bits (110), Expect(2) = 5e-06
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1
Query: 229 QGGIGIKRSLDELAASCLSYDYSEPPRLV 315
QGGIGIKRSLDELAA + ++YSE PRLV
Sbjct: 196 QGGIGIKRSLDELAAKYMRHEYSEAPRLV 224
Score = 29.6 bits (65), Expect(2) = 5e-06
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 99 DDIIIVVNKPPGIPVQ 146
D I+VVNKPPG+PVQ
Sbjct: 181 DPEIVVVNKPPGMPVQ 196