BLASTX nr result

ID: Jatropha_contig00036348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00036348
         (460 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESR47892.1| hypothetical protein CICLE_v10000930mg [Citrus cl...    49   4e-08
ref|XP_002534290.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
gb|ESQ39028.1| hypothetical protein EUTSA_v10001406mg [Eutrema s...    54   2e-06
ref|XP_002327325.1| predicted protein [Populus trichocarpa] gi|5...    57   3e-06
ref|XP_006294042.1| hypothetical protein CARUB_v10023033mg [Caps...    55   9e-06
ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arab...    55   9e-06
ref|NP_566005.1| mitochondrial transcription termination factor ...    55   9e-06

>gb|ESR47892.1| hypothetical protein CICLE_v10000930mg [Citrus clementina]
          Length = 500

 Score = 49.3 bits (116), Expect(2) = 4e-08
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +2

Query: 374 ASFSTQTSKFPEYEMPSVTWGVVQGKREK 460
           +SFSTQ   FPEY+MPSVTWGVVQGK+EK
Sbjct: 48  SSFSTQ---FPEYQMPSVTWGVVQGKKEK 73



 Score = 33.5 bits (75), Expect(2) = 4e-08
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +1

Query: 202 MGLSLHRRRNLLTLLINPVAPQLSTKSASLSSLIKNPENPCPRNLQLENPFRVLKIGCF 378
           M L+L + R  LT+  NP             S +K  +NP  +N  L++PFRV +I  F
Sbjct: 1   MSLTLLKGRKFLTVFTNPYV---------FYSKLKTLQNPFAQNSNLQSPFRVSQISSF 50


>ref|XP_002534290.1| conserved hypothetical protein [Ricinus communis]
           gi|223525568|gb|EEF28093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 372

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +2

Query: 371 GASFSTQTSKFPEYEMPSVTWGVVQGKREK 460
           GASFST +SKFPEYEMPSVTWGVVQGKREK
Sbjct: 57  GASFSTSSSKFPEYEMPSVTWGVVQGKREK 86


>gb|ESQ39028.1| hypothetical protein EUTSA_v10001406mg [Eutrema salsugineum]
          Length = 513

 Score = 54.3 bits (129), Expect(2) = 2e-06
 Identities = 21/29 (72%), Positives = 28/29 (96%)
 Frame = +2

Query: 374 ASFSTQTSKFPEYEMPSVTWGVVQGKREK 460
           + ++TQ+SKFPEYEMP+VTWGV+QGK+EK
Sbjct: 53  SQYATQSSKFPEYEMPTVTWGVIQGKKEK 81



 Score = 23.1 bits (48), Expect(2) = 2e-06
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +1

Query: 199 NMGLSLHRRRNLLTLLINPVAPQLSTKSASLSSLIKNPEN 318
           N  LSL RR NL+   I+P    L      +     NP +
Sbjct: 9   NKFLSLIRRHNLILPFISPETKTLINPDPHIPQFQSNPSS 48


>ref|XP_002327325.1| predicted protein [Populus trichocarpa] gi|550325609|gb|ERP54130.1|
           mitochondrial transcription termination factor-related
           family protein [Populus trichocarpa]
          Length = 514

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/53 (58%), Positives = 36/53 (67%)
 Frame = +2

Query: 302 SKTPKTHVPETFN*KILLGF*KSGASFSTQTSKFPEYEMPSVTWGVVQGKREK 460
           SKT +   P+    +  LG  +  A FSTQ SKF EYEMPSVTWGVVQGK+EK
Sbjct: 32  SKTQQNPCPQNPLTQNPLGVLQFYALFSTQASKFHEYEMPSVTWGVVQGKKEK 84


>ref|XP_006294042.1| hypothetical protein CARUB_v10023033mg [Capsella rubella]
           gi|482562750|gb|EOA26940.1| hypothetical protein
           CARUB_v10023033mg [Capsella rubella]
          Length = 509

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 22/29 (75%), Positives = 28/29 (96%)
 Frame = +2

Query: 374 ASFSTQTSKFPEYEMPSVTWGVVQGKREK 460
           A ++TQ+SKFPEYEMP+VTWGV+QGK+EK
Sbjct: 52  AHYATQSSKFPEYEMPTVTWGVIQGKKEK 80


>ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arabidopsis lyrata subsp.
           lyrata] gi|297327784|gb|EFH58204.1| hypothetical protein
           ARALYDRAFT_903808 [Arabidopsis lyrata subsp. lyrata]
          Length = 508

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 22/29 (75%), Positives = 28/29 (96%)
 Frame = +2

Query: 374 ASFSTQTSKFPEYEMPSVTWGVVQGKREK 460
           A ++TQ+SKFPEYEMP+VTWGV+QGK+EK
Sbjct: 52  AHYATQSSKFPEYEMPTVTWGVIQGKKEK 80


>ref|NP_566005.1| mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|3212859|gb|AAC23410.1|
           expressed protein [Arabidopsis thaliana]
           gi|14532592|gb|AAK64024.1| unknown protein [Arabidopsis
           thaliana] gi|19310761|gb|AAL85111.1| unknown protein
           [Arabidopsis thaliana] gi|330255268|gb|AEC10362.1|
           mitochondrial transcription termination factor family
           protein [Arabidopsis thaliana]
          Length = 507

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 22/29 (75%), Positives = 28/29 (96%)
 Frame = +2

Query: 374 ASFSTQTSKFPEYEMPSVTWGVVQGKREK 460
           A ++TQ+SKFPEYEMP+VTWGV+QGK+EK
Sbjct: 51  AHYATQSSKFPEYEMPTVTWGVIQGKKEK 79


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