BLASTX nr result

ID: Jatropha_contig00036345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00036345
         (473 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERP60743.1| hypothetical protein POPTR_0005s09300g [Populus t...    58   1e-06
gb|ERP60742.1| hypothetical protein POPTR_0005s09300g [Populus t...    58   1e-06
ref|XP_002521533.1| ring finger protein, putative [Ricinus commu...    58   1e-06
gb|EOX99094.1| RING/U-box superfamily protein [Theobroma cacao]        56   5e-06

>gb|ERP60743.1| hypothetical protein POPTR_0005s09300g [Populus trichocarpa]
          Length = 316

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/77 (45%), Positives = 42/77 (54%)
 Frame = +1

Query: 241 NNPKLGSGEAKSIGXXXXXXXXXXXXXXXXXLNLGSANDNNGDEEEQEAQPPRQSFRRTP 420
           +N KLGSGE+K+                      G   + +G+ E     P RQ+ RRTP
Sbjct: 11  SNTKLGSGESKNNNSEQQEENPNLSSN-------GEQQEGDGEREGGGGGPQRQTSRRTP 63

Query: 421 FTNLSQVDADLALARTL 471
           FTNLSQVDADLALARTL
Sbjct: 64  FTNLSQVDADLALARTL 80


>gb|ERP60742.1| hypothetical protein POPTR_0005s09300g [Populus trichocarpa]
          Length = 314

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/77 (45%), Positives = 42/77 (54%)
 Frame = +1

Query: 241 NNPKLGSGEAKSIGXXXXXXXXXXXXXXXXXLNLGSANDNNGDEEEQEAQPPRQSFRRTP 420
           +N KLGSGE+K+                      G   + +G+ E     P RQ+ RRTP
Sbjct: 11  SNTKLGSGESKNNNSEQQEENPNLSSN-------GEQQEGDGEREGGGGGPQRQTSRRTP 63

Query: 421 FTNLSQVDADLALARTL 471
           FTNLSQVDADLALARTL
Sbjct: 64  FTNLSQVDADLALARTL 80


>ref|XP_002521533.1| ring finger protein, putative [Ricinus communis]
           gi|223539211|gb|EEF40804.1| ring finger protein,
           putative [Ricinus communis]
          Length = 316

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/78 (53%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
 Frame = +1

Query: 250 KLGSGEAKSIGXXXXXXXXXXXXXXXXX-LNLGSAND--NNGDEEEQEAQPPRQSF-RRT 417
           KLG GEAKS                    LNLGS+     NG++E+    PPRQS  RRT
Sbjct: 5   KLGLGEAKSNNNSSSSSTKEAEKEEEKANLNLGSSPSATENGEQED----PPRQSSSRRT 60

Query: 418 PFTNLSQVDADLALARTL 471
           PFTNLSQVDADLALARTL
Sbjct: 61  PFTNLSQVDADLALARTL 78


>gb|EOX99094.1| RING/U-box superfamily protein [Theobroma cacao]
          Length = 392

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 31/51 (60%), Positives = 35/51 (68%), Gaps = 8/51 (15%)
 Frame = +1

Query: 343 GSANDN--------NGDEEEQEAQPPRQSFRRTPFTNLSQVDADLALARTL 471
           G+ NDN          +EEE+E +  RQS  RTPFTNLSQVDADLALARTL
Sbjct: 103 GNDNDNLNNESEHVEREEEEEEEEDTRQSSTRTPFTNLSQVDADLALARTL 153


Top