BLASTX nr result
ID: Jatropha_contig00036278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00036278
(625 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|2... 97 3e-18
ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|2... 95 2e-17
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co... 93 7e-17
ref|XP_002267022.2| PREDICTED: uncharacterized protein LOC100245... 89 1e-15
gb|EOX92045.1| RNA-binding (RRM/RBD/RNP motifs) family protein i... 87 4e-15
gb|ESR39592.1| hypothetical protein CICLE_v100264482mg, partial ... 86 6e-15
gb|EOX92046.1| RNA-binding (RRM/RBD/RNP motifs) family protein i... 83 7e-14
ref|XP_006353217.1| PREDICTED: polyadenylate-binding protein 2-A... 79 1e-12
gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus pe... 75 1e-11
ref|XP_004250109.1| PREDICTED: polyadenylate-binding protein 2-l... 74 4e-11
ref|XP_004288178.1| PREDICTED: polyadenylate-binding protein 2-l... 73 5e-11
ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-l... 72 1e-10
gb|ACU24426.1| unknown [Glycine max] 72 1e-10
ref|XP_006279497.1| hypothetical protein CARUB_v10027046mg, part... 71 2e-10
gb|AGV54499.1| RNA binding/nucleic acid binding [Phaseolus vulga... 70 6e-10
ref|XP_004143458.1| PREDICTED: polyadenylate-binding protein 2-l... 69 8e-10
ref|XP_002866661.1| polyadenylate-binding protein family protein... 69 1e-09
ref|NP_201329.1| RNA recognition motif-containing protein [Arabi... 69 1e-09
gb|ESW31711.1| hypothetical protein PHAVU_002G261500g [Phaseolus... 68 2e-09
gb|ESQ31342.1| hypothetical protein EUTSA_v10004890mg [Eutrema s... 68 2e-09
>ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|222855749|gb|EEE93296.1|
hypothetical protein POPTR_0005s07440g [Populus
trichocarpa]
Length = 218
Score = 97.1 bits (240), Expect = 3e-18
Identities = 53/90 (58%), Positives = 54/90 (60%)
Frame = +1
Query: 88 VYGGEIPDVEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKVEKE 267
VYGGEIPDVEGDMDPHN K QAKVEKE
Sbjct: 8 VYGGEIPDVEGDMDPHNADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67
Query: 268 MGAVQDPASAAVNQANREEADSRSVFVGNV 357
MGAVQDPA+AA NQANREEADSRSVFVGNV
Sbjct: 68 MGAVQDPATAAANQANREEADSRSVFVGNV 97
>ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|222852871|gb|EEE90418.1|
hypothetical protein POPTR_0007s05140g [Populus
trichocarpa]
Length = 218
Score = 94.7 bits (234), Expect = 2e-17
Identities = 52/90 (57%), Positives = 53/90 (58%)
Frame = +1
Query: 88 VYGGEIPDVEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKVEKE 267
VYGGEIPDVEGDMDPHN K QAKVEKE
Sbjct: 8 VYGGEIPDVEGDMDPHNADVDMSAAEDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67
Query: 268 MGAVQDPASAAVNQANREEADSRSVFVGNV 357
MGAV DPASAA NQAN+EEADSRSVFVGNV
Sbjct: 68 MGAVPDPASAAANQANKEEADSRSVFVGNV 97
>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein,
putative [Ricinus communis]
Length = 218
Score = 92.8 bits (229), Expect = 7e-17
Identities = 50/90 (55%), Positives = 53/90 (58%)
Frame = +1
Query: 88 VYGGEIPDVEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKVEKE 267
VYGGEIPD+EGD+DPHN K QAKVEKE
Sbjct: 8 VYGGEIPDMEGDIDPHNVDMDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67
Query: 268 MGAVQDPASAAVNQANREEADSRSVFVGNV 357
MGAVQDPASAA NQAN+EE DSRSVFVGNV
Sbjct: 68 MGAVQDPASAAANQANKEETDSRSVFVGNV 97
>ref|XP_002267022.2| PREDICTED: uncharacterized protein LOC100245696 [Vitis vinifera]
gi|296084732|emb|CBI25873.3| unnamed protein product
[Vitis vinifera]
Length = 122
Score = 88.6 bits (218), Expect = 1e-15
Identities = 52/94 (55%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +1
Query: 88 VYGGEIPD---VEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKV 258
VYGGEIPD +EGDMD HN K QAKV
Sbjct: 8 VYGGEIPDEGEMEGDMDAHNADVDMATNDDDAVKELDEMKKRLKEMEEEAAALREMQAKV 67
Query: 259 EKEMGAVQDPASAAVNQANREEADSRSVFVGNVR 360
EKEMGAVQDPASAAV QAN+EEADSRSVFVGNVR
Sbjct: 68 EKEMGAVQDPASAAVTQANKEEADSRSVFVGNVR 101
>gb|EOX92045.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 1
[Theobroma cacao]
Length = 221
Score = 87.0 bits (214), Expect = 4e-15
Identities = 50/93 (53%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Frame = +1
Query: 88 VYGGEIPD---VEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKV 258
VYGGEIPD +EGD+DPHN K QAKV
Sbjct: 8 VYGGEIPDEGEMEGDLDPHNADVDMSAADDDAVKELDEMKKRLKEMEDEAAALREMQAKV 67
Query: 259 EKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
EKEMGAVQDPA AA NQA+REEADSRSVFVGNV
Sbjct: 68 EKEMGAVQDPAGAAANQASREEADSRSVFVGNV 100
>gb|ESR39592.1| hypothetical protein CICLE_v100264482mg, partial [Citrus
clementina] gi|557528343|gb|ESR39593.1| hypothetical
protein CICLE_v100264482mg, partial [Citrus clementina]
Length = 96
Score = 86.3 bits (212), Expect = 6e-15
Identities = 47/89 (52%), Positives = 50/89 (56%)
Frame = +1
Query: 88 VYGGEIPDVEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKVEKE 267
VYGGEIPDVEGDMD HN K QAKVEKE
Sbjct: 8 VYGGEIPDVEGDMDAHNTDVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67
Query: 268 MGAVQDPASAAVNQANREEADSRSVFVGN 354
MGA QDPA+ A NQA++EEADSRSVFVGN
Sbjct: 68 MGAAQDPANVAANQASKEEADSRSVFVGN 96
>gb|EOX92046.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2
[Theobroma cacao]
Length = 215
Score = 82.8 bits (203), Expect = 7e-14
Identities = 50/93 (53%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Frame = +1
Query: 88 VYGGEIPD---VEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKV 258
VYGGEIPD +EGD+DPHN K QAKV
Sbjct: 8 VYGGEIPDEGEMEGDLDPHNADVDMSAADDDAVKKRLKEMEDEAAALREM------QAKV 61
Query: 259 EKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
EKEMGAVQDPA AA NQA+REEADSRSVFVGNV
Sbjct: 62 EKEMGAVQDPAGAAANQASREEADSRSVFVGNV 94
>ref|XP_006353217.1| PREDICTED: polyadenylate-binding protein 2-A-like isoform X1
[Solanum tuberosum]
Length = 218
Score = 78.6 bits (192), Expect = 1e-12
Identities = 44/90 (48%), Positives = 49/90 (54%)
Frame = +1
Query: 88 VYGGEIPDVEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKVEKE 267
VYGGEIP +EGDM+PH K QAKVEKE
Sbjct: 8 VYGGEIP-IEGDMEPHGADVDMATADDDAVKELDEMKKRLKEMEDEAAALREMQAKVEKE 66
Query: 268 MGAVQDPASAAVNQANREEADSRSVFVGNV 357
MG+VQDPAS A +Q NREE DSRS+FVGNV
Sbjct: 67 MGSVQDPASTAASQENREEVDSRSIFVGNV 96
>gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus persica]
Length = 221
Score = 75.1 bits (183), Expect = 1e-11
Identities = 43/93 (46%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +1
Query: 88 VYGGEIPD---VEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKV 258
VYGGEIPD +EGD++ H+ K QAKV
Sbjct: 8 VYGGEIPDEGEMEGDIEAHHADVDMSTADDDAVKELDEMKKRLKEMEEEAAALREMQAKV 67
Query: 259 EKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
EKEMGAVQDPA+ A +QAN+EE D+RSVFVGNV
Sbjct: 68 EKEMGAVQDPAAVAASQANKEEVDARSVFVGNV 100
>ref|XP_004250109.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum
lycopersicum]
Length = 219
Score = 73.6 bits (179), Expect = 4e-11
Identities = 44/91 (48%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 88 VYGGEIPDVEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKVEKE 267
VYGGEIP +EGDM+PH K QAKVEKE
Sbjct: 8 VYGGEIP-IEGDMEPHGADVDMATADDDAVKELDEMKKRLKEMEDEAAALREMQAKVEKE 66
Query: 268 MGAVQD-PASAAVNQANREEADSRSVFVGNV 357
MG+VQD PAS A +Q NREE DSRS+FVGNV
Sbjct: 67 MGSVQDDPASTAASQENREELDSRSIFVGNV 97
>ref|XP_004288178.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
subsp. vesca]
Length = 222
Score = 73.2 bits (178), Expect = 5e-11
Identities = 45/94 (47%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Frame = +1
Query: 88 VYGGEIPD---VEGDMDP-HNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAK 255
VYG EIPD +EGD+DP H K QAK
Sbjct: 8 VYGAEIPDEAEMEGDLDPNHADVDMSTADDDAAVKELDEMKKRLKEMEEEAAALREMQAK 67
Query: 256 VEKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
VEKEMGA QDPA+AAV+QA++EEAD+RSVFVGNV
Sbjct: 68 VEKEMGAAQDPAAAAVSQAHKEEADARSVFVGNV 101
>ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 72.0 bits (175), Expect = 1e-10
Identities = 43/93 (46%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +1
Query: 88 VYGGEIPD---VEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKV 258
VYGGEIPD +EGD+D K QAKV
Sbjct: 8 VYGGEIPDEGEMEGDIDMSAADDEAAVDDDAAVKELDEMKRRLKEMEEEAAALREMQAKV 67
Query: 259 EKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
EKE+G+VQDPA+AA +QAN+EEAD+RSVFVGNV
Sbjct: 68 EKEIGSVQDPANAAASQANKEEADARSVFVGNV 100
>gb|ACU24426.1| unknown [Glycine max]
Length = 218
Score = 72.0 bits (175), Expect = 1e-10
Identities = 43/93 (46%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +1
Query: 88 VYGGEIPD---VEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKV 258
VYGGEIPD +EGD+D K QAKV
Sbjct: 8 VYGGEIPDEGEMEGDIDMSAADDEAAVDDDAAVKELDEMKRRLKEMEEEAAALREMQAKV 67
Query: 259 EKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
EKE+G+VQDPA+AA +QAN+EEAD+RSVFVGNV
Sbjct: 68 EKEIGSVQDPANAAASQANKEEADARSVFVGNV 100
>ref|XP_006279497.1| hypothetical protein CARUB_v10027046mg, partial [Capsella rubella]
gi|482548201|gb|EOA12395.1| hypothetical protein
CARUB_v10027046mg, partial [Capsella rubella]
Length = 233
Score = 71.2 bits (173), Expect = 2e-10
Identities = 47/108 (43%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +1
Query: 43 RNIRRKRDMXXXXXXVYGGEIPDV---EGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXX 213
R R+R M VYGGEIPDV +GDM+ N K
Sbjct: 6 RRRERERAMEEEEHEVYGGEIPDVGEMDGDMEAPNPDLDMTAADDDAVKELDEMKKRLKE 65
Query: 214 XXXXXXXXXXXQAKVEKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
QAKVEKEMG QDPAS A NQA +EE D+RSVFVGNV
Sbjct: 66 MEDEAAALREMQAKVEKEMGG-QDPASIAANQAGKEEVDARSVFVGNV 112
>gb|AGV54499.1| RNA binding/nucleic acid binding [Phaseolus vulgaris]
Length = 215
Score = 69.7 bits (169), Expect = 6e-10
Identities = 44/93 (47%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +1
Query: 88 VYGGEIPD---VEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKV 258
VYGGEIPD +EGD+D K QAKV
Sbjct: 8 VYGGEIPDEGEMEGDVD------MSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAKV 61
Query: 259 EKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
EKE+G+VQDPA+AA +QAN+EEADSRSVFVGNV
Sbjct: 62 EKEIGSVQDPANAAASQANKEEADSRSVFVGNV 94
>ref|XP_004143458.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449496421|ref|XP_004160130.1| PREDICTED:
polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 69.3 bits (168), Expect = 8e-10
Identities = 43/90 (47%), Positives = 48/90 (53%)
Frame = +1
Query: 88 VYGGEIPDVEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKVEKE 267
VYGGEIP EGD+D K QAKVEKE
Sbjct: 8 VYGGEIPVEEGDID-------MSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60
Query: 268 MGAVQDPASAAVNQANREEADSRSVFVGNV 357
MGAVQDPA +AV+Q ++EEADSRSVFVGNV
Sbjct: 61 MGAVQDPAGSAVSQESKEEADSRSVFVGNV 90
>ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata] gi|297312496|gb|EFH42920.1|
polyadenylate-binding protein family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 220
Score = 68.6 bits (166), Expect = 1e-09
Identities = 44/93 (47%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Frame = +1
Query: 88 VYGGEIPDV---EGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKV 258
VYGGEIPDV +GDM+ N K QAKV
Sbjct: 8 VYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAALREMQAKV 67
Query: 259 EKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
EKEMGA QDPAS A NQA +EE D+RSVFVGNV
Sbjct: 68 EKEMGA-QDPASIAANQAGKEEVDARSVFVGNV 99
>ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding
protein II-like [Arabidopsis thaliana]
gi|10178188|dbj|BAB11662.1| poly(A)-binding protein
II-like [Arabidopsis thaliana]
gi|23197620|gb|AAN15337.1| poly(A)-binding protein
II-like [Arabidopsis thaliana]
gi|332010647|gb|AED98030.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 68.6 bits (166), Expect = 1e-09
Identities = 44/93 (47%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Frame = +1
Query: 88 VYGGEIPDV---EGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKV 258
VYGGEIPDV +GDM+ N K QAKV
Sbjct: 8 VYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAALREMQAKV 67
Query: 259 EKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
EKEMGA QDPAS A NQA +EE D+RSVFVGNV
Sbjct: 68 EKEMGA-QDPASIAANQAGKEEVDARSVFVGNV 99
>gb|ESW31711.1| hypothetical protein PHAVU_002G261500g [Phaseolus vulgaris]
Length = 215
Score = 68.2 bits (165), Expect = 2e-09
Identities = 43/93 (46%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +1
Query: 88 VYGGEIPD---VEGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKV 258
VYGGEIPD +EGD+D K QAKV
Sbjct: 8 VYGGEIPDEGEMEGDVD------MSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAKV 61
Query: 259 EKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
EKE+G+VQDP +AA +QAN+EEADSRSVFVGNV
Sbjct: 62 EKEIGSVQDPVNAAASQANKEEADSRSVFVGNV 94
>gb|ESQ31342.1| hypothetical protein EUTSA_v10004890mg [Eutrema salsugineum]
Length = 220
Score = 67.8 bits (164), Expect = 2e-09
Identities = 43/93 (46%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Frame = +1
Query: 88 VYGGEIPDV---EGDMDPHNXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXQAKV 258
VYGGEIPDV +GDM+ N K QAKV
Sbjct: 8 VYGGEIPDVGEMDGDMEAPNPDMDMASADDDAVKELDEMKKRLKEMEDEAAALREMQAKV 67
Query: 259 EKEMGAVQDPASAAVNQANREEADSRSVFVGNV 357
EKEMGA QDPA+ A NQA +EE D+RSVFVGNV
Sbjct: 68 EKEMGA-QDPATIAANQAGKEEVDARSVFVGNV 99