BLASTX nr result
ID: Jatropha_contig00036178
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00036178
(567 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_003934507.1| photosystem II 44 kDa protein [Cathaya argyr... 48 5e-10
ref|YP_002905119.1| photosytem II 44 kDa protein [Picea sitchens... 48 5e-10
ref|YP_007375039.1| photosystem II CP43 chlorophyll apoprotein [... 48 3e-09
ref|YP_007025924.1| photosystem II CP43 chlorophyll apoprotein [... 48 3e-09
gb|AEX65316.1| photosystem II protein CP43 [Blossfeldia liliputana] 48 3e-09
dbj|BAK86720.1| photosystem II 44 kDa protein (chloroplast) [Sci... 48 3e-09
emb|CAA25802.1| unnamed protein product [Marchantia polymorpha] 48 3e-09
gb|AEX65324.1| photosystem II protein CP43 [Weingartia kargliana] 48 3e-09
gb|AEX65321.1| photosystem II protein CP43 [Pereskiopsis diguetii] 48 3e-09
gb|AEX65320.1| photosystem II protein CP43 [Portulacaria afra] 48 3e-09
gb|AEX65319.1| photosystem II protein CP43 [Mollugo verticillata] 48 3e-09
gb|AEX65318.1| photosystem II protein CP43 [Maihuenia poeppigii] 48 3e-09
gb|AEX65317.1| photosystem II protein CP43 [Didierea madagascari... 48 3e-09
gb|AEX65315.1| photosystem II protein CP43 [Anredera baselloides] 48 3e-09
ref|YP_008815026.1| photosystem II CP43 chlorophyll apoprotein (... 48 3e-09
gb|ACH47544.1| photosystem II CP43 chlorophyll apoprotein [Erodi... 48 3e-09
gb|ACH47547.1| photosystem II CP43 chlorophyll apoprotein [Geran... 48 3e-09
gb|ACH47545.1| photosystem II CP43 chlorophyll apoprotein [Geran... 48 3e-09
gb|AFQ99058.1| photosystem II CP43 chlorophyll apoprotein (chlor... 48 3e-09
gb|AGK82914.1| hotosystem II 44 kDa protein (chloroplast) [Lupin... 48 3e-09
>ref|YP_003934507.1| photosystem II 44 kDa protein [Cathaya argyrophylla]
gi|307683353|dbj|BAJ19660.1| photosystem II 44 kDa
protein (chloroplast) [Cathaya argyrophylla]
Length = 473
Score = 47.8 bits (112), Expect(2) = 5e-10
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 441 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
Score = 42.0 bits (97), Expect(2) = 5e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFVP 60
NAVNYVSP SWLATSHFVP
Sbjct: 415 NAVNYVSPRSWLATSHFVP 433
>ref|YP_002905119.1| photosytem II 44 kDa protein [Picea sitchensis]
gi|353351817|ref|YP_004891700.1| photosystem II 44 kDa
protein (chloroplast) [Picea morrisonicola]
gi|523420685|ref|YP_008082859.1| photosystem II 44 kDa
protein (chloroplast) [Picea abies]
gi|226875328|gb|ACO89067.1| photosytem II 44 kDa protein
[Picea sitchensis] gi|307683629|dbj|BAJ19793.1|
photosystem II 44 kDa protein [Picea morrisonicola]
gi|347977480|dbj|BAK86437.1| photosystem II 44 kDa
protein (chloroplast) [Picea morrisonicola]
gi|502524893|emb|CCW23144.1| photosystem II 44 kDa
protein (chloroplast) [Picea abies]
Length = 473
Score = 47.8 bits (112), Expect(2) = 5e-10
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 441 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
Score = 42.0 bits (97), Expect(2) = 5e-10
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFVP 60
NAVNYVSP SWLATSHFVP
Sbjct: 415 NAVNYVSPRSWLATSHFVP 433
>ref|YP_007375039.1| photosystem II CP43 chlorophyll apoprotein [Quercus rubra]
gi|441421918|gb|AGC31242.1| photosystem II CP43
chlorophyll apoprotein [Quercus rubra]
Length = 487
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 455 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 487
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 429 NAVNYVSPRSWLATSHFV 446
>ref|YP_007025924.1| photosystem II CP43 chlorophyll apoprotein [Vaccinium macrocarpon]
gi|374093732|gb|AEY84168.1| photosystem II CP43
chlorophyll apoprotein (chloroplast) [Vaccinium
macrocarpon] gi|385198160|gb|AFI44078.1| photosystem II
CP43 chlorophyll apoprotein [Vaccinium macrocarpon]
Length = 487
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 455 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 487
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 429 NAVNYVSPRSWLATSHFV 446
>gb|AEX65316.1| photosystem II protein CP43 [Blossfeldia liliputana]
Length = 487
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 455 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 487
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 429 NAVNYVSPRSWLATSHFV 446
>dbj|BAK86720.1| photosystem II 44 kDa protein (chloroplast) [Sciadopitys
verticillata]
Length = 487
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 455 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 487
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 429 NAVNYVSPRSWLATSHFV 446
>emb|CAA25802.1| unnamed protein product [Marchantia polymorpha]
Length = 487
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 455 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 487
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 429 NAVNYVSPRSWLATSHFV 446
>gb|AEX65324.1| photosystem II protein CP43 [Weingartia kargliana]
Length = 486
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 454 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 486
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 428 NAVNYVSPRSWLATSHFV 445
>gb|AEX65321.1| photosystem II protein CP43 [Pereskiopsis diguetii]
Length = 486
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 454 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 486
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 428 NAVNYVSPRSWLATSHFV 445
>gb|AEX65320.1| photosystem II protein CP43 [Portulacaria afra]
Length = 486
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 454 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 486
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 428 NAVNYVSPRSWLATSHFV 445
>gb|AEX65319.1| photosystem II protein CP43 [Mollugo verticillata]
Length = 486
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 454 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 486
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 428 NAVNYVSPRSWLATSHFV 445
>gb|AEX65318.1| photosystem II protein CP43 [Maihuenia poeppigii]
Length = 486
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 454 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 486
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 428 NAVNYVSPRSWLATSHFV 445
>gb|AEX65317.1| photosystem II protein CP43 [Didierea madagascariensis]
Length = 486
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 454 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 486
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 428 NAVNYVSPRSWLATSHFV 445
>gb|AEX65315.1| photosystem II protein CP43 [Anredera baselloides]
Length = 486
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 454 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 486
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 428 NAVNYVSPRSWLATSHFV 445
>ref|YP_008815026.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Metapanax
delavayi] gi|563940381|ref|YP_008815200.1| photosystem
II CP43 chlorophyll apoprotein (chloroplast) [Kalopanax
septemlobus] gi|458599367|gb|AGG39126.1| photosystem II
CP43 chlorophyll apoprotein (chloroplast) [Metapanax
delavayi] gi|458599608|gb|AGG39300.1| photosystem II
CP43 chlorophyll apoprotein (chloroplast) [Kalopanax
septemlobus]
Length = 483
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 451 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 483
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 425 NAVNYVSPRSWLATSHFV 442
>gb|ACH47544.1| photosystem II CP43 chlorophyll apoprotein [Erodium texanum]
Length = 476
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 444 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 476
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 418 NAVNYVSPRSWLATSHFV 435
>gb|ACH47547.1| photosystem II CP43 chlorophyll apoprotein [Geranium palmatum]
Length = 474
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 442 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 474
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 416 NAVNYVSPRSWLATSHFV 433
>gb|ACH47545.1| photosystem II CP43 chlorophyll apoprotein [Geranium carolinianum]
Length = 474
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 442 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 474
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 416 NAVNYVSPRSWLATSHFV 433
>gb|AFQ99058.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Sedum
sarmentosum]
Length = 473
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 441 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 415 NAVNYVSPRSWLATSHFV 432
>gb|AGK82914.1| hotosystem II 44 kDa protein (chloroplast) [Lupinus luteus]
Length = 473
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +2
Query: 83 HLWHXXXXXXXXXXFE*GIDRDFEPVLSMTPLN 181
HLWH FE GIDRDFEPVLSMTPLN
Sbjct: 441 HLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 4 NAVNYVSPGSWLATSHFV 57
NAVNYVSP SWLATSHFV
Sbjct: 415 NAVNYVSPRSWLATSHFV 432