BLASTX nr result

ID: Jatropha_contig00036164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00036164
         (488 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511012.1| conserved hypothetical protein [Ricinus comm...    76   5e-12
ref|XP_002299408.1| AP2/ERF domain-containing transcription fact...    65   1e-08
ref|XP_002332694.1| AP2/ERF domain-containing transcription fact...    64   3e-08

>ref|XP_002511012.1| conserved hypothetical protein [Ricinus communis]
           gi|223550127|gb|EEF51614.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 47/87 (54%), Positives = 57/87 (65%)
 Frame = +3

Query: 114 MASPNEASALDQIRQHLLSTDCASFDSFISTSNNFFLKSEIQDFDYLLPNQTLNLEFKSQ 293
           MA  +E S L+ IRQHLL TD AS DSFIS  +NF      +DFD+L P Q  + EFK +
Sbjct: 1   MAFQDERSTLESIRQHLL-TDFASMDSFISDLDNFIKPERQEDFDFLQPQQ--HQEFKME 57

Query: 294 QVVQNSNNSPKSSTLSQRKPAMSKISI 374
                +  SP+SSTLSQRKPAMS I+I
Sbjct: 58  -----TKPSPRSSTLSQRKPAMSNIAI 79


>ref|XP_002299408.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222846666|gb|EEE84213.1|
           ethylene-responsive element-binding family protein
           [Populus trichocarpa]
          Length = 287

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 16/137 (11%)
 Frame = +3

Query: 126 NEASALDQIRQHLLSTDCASFDSFIS------------TSNNFFLKSEIQDFDYLLPNQT 269
           +EAS L+ IRQHLL TD AS DSFIS            T++++++KSE  +FD   P   
Sbjct: 6   HEASTLELIRQHLL-TDFASMDSFISNLDDLCSTSTTSTTDDYYIKSESTEFD---PFDQ 61

Query: 270 LNLEFKSQQVVQNSN--NSPKSST-LSQRKPAMSK-ISIXXXXXXXXXXXXXXXXXXENN 437
              + ++Q  +++    +SPKSST LSQRKP+M K I+I                  + +
Sbjct: 62  PQFKLQTQSSIESKPQYSSPKSSTSLSQRKPSMIKDIAIPPPATLNMNPQVAQPVVNKTD 121

Query: 438 RSSDHSSEEKHYRGVRR 488
            SS+   +++HYRGVRR
Sbjct: 122 LSSE---QDRHYRGVRR 135


>ref|XP_002332694.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|550343202|gb|ERP63622.1|
           ethylene-responsive element-binding family protein
           [Populus trichocarpa]
          Length = 288

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 55/139 (39%), Positives = 79/139 (56%), Gaps = 14/139 (10%)
 Frame = +3

Query: 114 MASPNEASALDQIRQHLLSTDCASFDSFI-------STSNNF----FLKSEIQDFDYLLP 260
           MAS +EASAL+ IR+HLL TD AS DS I       STS++     ++K+E  +FD    
Sbjct: 1   MASFDEASALELIREHLL-TDFASMDSLITNLDDLCSTSSSCITTDYIKTESTEFDPFNQ 59

Query: 261 NQTLNLEFKSQQVVQNS-NNSPKS-STLSQRKPAMSK-ISIXXXXXXXXXXXXXXXXXXE 431
           ++    + +SQ  +++   +SPKS STLSQRKP+M K I+I                  +
Sbjct: 60  SEHPQPKLQSQSSIESKPQSSPKSPSTLSQRKPSMIKNIAIPPPATLNMTPQVVQPVVIK 119

Query: 432 NNRSSDHSSEEKHYRGVRR 488
            + SS+   +E+HYRGVRR
Sbjct: 120 ADVSSE---QERHYRGVRR 135


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