BLASTX nr result

ID: Jatropha_contig00036143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00036143
         (435 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530870.1| conserved hypothetical protein [Ricinus comm...    72   5e-11
ref|XP_002304872.1| predicted protein [Populus trichocarpa] gi|1...    57   3e-06
ref|XP_004294976.1| PREDICTED: uncharacterized protein LOC101298...    40   4e-06

>ref|XP_002530870.1| conserved hypothetical protein [Ricinus communis]
           gi|223529559|gb|EEF31510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 53/108 (49%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
 Frame = +1

Query: 121 VQSVYTSPFQSIAHTGFKNILNPASGPPKSLFPTFDTDQP------KRFLYLSKRSYYTA 282
           VQSVYT  FQS  +   K I+NP S  PKSLFPTFDT+        KRFLYL+KRS+ T 
Sbjct: 6   VQSVYTPSFQSNNYNNTK-IINPTSLLPKSLFPTFDTNGNHPTKTLKRFLYLTKRSFATR 64

Query: 283 TRKVTVNASLLETP-SFMGRPALHLLWRS*SLVLAGIKG--LIPLVSG 417
               T NASLLETP  + GR  +       +L+ +G+ G    PLVSG
Sbjct: 65  KTVTTTNASLLETPVLWAGRLCIFY-----ALLKSGLAGSKTNPLVSG 107


>ref|XP_002304872.1| predicted protein [Populus trichocarpa] gi|118488609|gb|ABK96117.1|
           unknown [Populus trichocarpa]
           gi|222842304|gb|EEE79851.1| hypothetical protein
           POPTR_0003s21420g [Populus trichocarpa]
          Length = 256

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
 Frame = +1

Query: 121 VQSVYTSPFQSIAHTGFKNILNPASGPPKSLFPTFDTDQPKRFLYL-----SKRSYYTAT 285
           VQ++YTSPFQS   T F +++   +  PKSLFPTFD    K F  L     ++    TA 
Sbjct: 6   VQTIYTSPFQSKTLTRFNSVIKSTTLLPKSLFPTFDCPS-KTFSRLFFNGNTRDRKLTAG 64

Query: 286 RKVTVNASLLETP-SFMGRPALHLLWRS*SLVLAGIKG--LIPLVSGF---GMGSG 435
              TV+ASL+E P  ++GR  +       +L+ AG+ G    PLVSG    G+G G
Sbjct: 65  ASFTVHASLIEAPVLWVGRLCIFY-----ALLKAGLAGSEANPLVSGLDGGGVGGG 115


>ref|XP_004294976.1| PREDICTED: uncharacterized protein LOC101298104 [Fragaria vesca
           subsp. vesca]
          Length = 259

 Score = 40.4 bits (93), Expect(2) = 4e-06
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
 Frame = +1

Query: 136 TSPFQSIAHTGFKNIL-NPASGPPKSLFPTFD----TDQPKRFLYLSKRSYYTATRKVTV 300
           +SPFQS + + FK +     S  PK+LF  F     T+  + FL  +K S++   R +++
Sbjct: 12  SSPFQSTSSSTFKTLSPTTTSNLPKTLFLGFPIQPTTNALQSFLLFTKISHFGKPRSLSI 71

Query: 301 NASLLETP 324
           NASL+E P
Sbjct: 72  NASLIEAP 79



 Score = 35.4 bits (80), Expect(2) = 4e-06
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +2

Query: 314 LKLPVLWAGRLCIFYGALEV 373
           ++ PVLWAGRLCIFY  L++
Sbjct: 76  IEAPVLWAGRLCIFYALLKI 95


Top