BLASTX nr result

ID: Jatropha_contig00036141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00036141
         (501 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532498.1| ring finger protein, putative [Ricinus commu...    64   5e-09
ref|XP_004287233.1| PREDICTED: uncharacterized protein LOC101295...    56   1e-06

>ref|XP_002532498.1| ring finger protein, putative [Ricinus communis]
           gi|223527773|gb|EEF29874.1| ring finger protein,
           putative [Ricinus communis]
          Length = 550

 Score = 64.3 bits (155), Expect(2) = 5e-09
 Identities = 34/54 (62%), Positives = 42/54 (77%), Gaps = 3/54 (5%)
 Frame = +3

Query: 228 FSSLICGGSSSRATLQME---DEVLVHSAKYCDPVTNEISNLAEESSFIYGTGT 380
           FSSL+CGGSSSR +LQME   DE+ + SA++CD +TNEI N AEESSF+  T T
Sbjct: 25  FSSLLCGGSSSRDSLQMENYPDEIRMSSAEHCDLITNEIWNPAEESSFLSDTRT 78



 Score = 21.6 bits (44), Expect(2) = 5e-09
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 448 SADCVLRNAETSDQGKCL 501
           SA+   RN ETS+  KCL
Sbjct: 102 SAEDGFRNTETSNLQKCL 119


>ref|XP_004287233.1| PREDICTED: uncharacterized protein LOC101295849 [Fragaria vesca
           subsp. vesca]
          Length = 537

 Score = 55.8 bits (133), Expect(2) = 1e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
 Frame = +3

Query: 225 LFSSLICGGSSSRATLQMED---EVLVHSAKYCDPVTNEISNLAEESSFIYGTGTRF 386
           + SSL+CGGSSSRATL+MED   E LV   ++CD   N + N  + SS I  TG  F
Sbjct: 21  ILSSLVCGGSSSRATLEMEDHQAECLVRHVEHCDRGNNPVQNSTDVSSLISSTGAGF 77



 Score = 21.9 bits (45), Expect(2) = 1e-06
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 463 LRNAETSDQGKCL 501
           LR+  TS+QGKCL
Sbjct: 104 LRSFGTSNQGKCL 116


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