BLASTX nr result

ID: Jatropha_contig00036101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00036101
         (446 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523146.1| nucleic acid binding protein, putative [Rici...    76   5e-12

>ref|XP_002523146.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223537553|gb|EEF39177.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 700

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 52/120 (43%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
 Frame = +2

Query: 65  MLRFAHCNPQTHLRKLIFLPSSINLLHMGSKFFFKPATXXXXXXXXXXXXT--RNPYHTF 238
           M R+A+ +PQ HL KL    S +    MGSK F KP T            +  R  YHT 
Sbjct: 1   MFRYAYYSPQIHLYKLSSSSSKVGF--MGSKLFLKPTTTTLPPLSPFSYSSSGRLQYHTC 58

Query: 239 KRLLPVACSKPISKIPPY--KANGFTSQATVPTPVYGEEEDLQTFEIWKLLKGKLGRVGV 412
           +RLLPV CSKPISK  PY  K NGF   AT+P PV  E+ +    E    L+GKL  +G+
Sbjct: 59  RRLLPVFCSKPISKNRPYLPKTNGF---ATLPAPVSSEDSEKPHLE---KLRGKLEVLGI 112


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