BLASTX nr result
ID: Jatropha_contig00036085
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00036085
(496 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu... 122 4e-26
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 118 9e-25
emb|CBI36672.3| unnamed protein product [Vitis vinifera] 118 9e-25
emb|CAN75157.1| hypothetical protein VITISV_042644 [Vitis vinifera] 118 9e-25
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti... 117 2e-24
emb|CAN75183.1| hypothetical protein VITISV_040912 [Vitis vinifera] 116 3e-24
gb|EMJ08652.1| hypothetical protein PRUPE_ppa005530mg [Prunus pe... 105 4e-21
gb|EEE95068.2| hypothetical protein POPTR_0013s05120g [Populus t... 105 8e-21
ref|XP_002319145.1| predicted protein [Populus trichocarpa] 105 8e-21
gb|ESR56594.1| hypothetical protein CICLE_v10020067mg [Citrus cl... 104 1e-20
gb|EOY10725.1| RNA-binding family protein isoform 6 [Theobroma c... 104 1e-20
gb|EOY10724.1| RNA-binding family protein isoform 5 [Theobroma c... 104 1e-20
gb|EOY10723.1| RNA-binding family protein isoform 4 [Theobroma c... 104 1e-20
gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma c... 104 1e-20
ref|XP_004139973.1| PREDICTED: RNA-binding protein 40-like [Cucu... 104 1e-20
gb|EEE99784.2| RNA recognition motif-containing family protein, ... 101 1e-19
ref|XP_002325403.1| predicted protein [Populus trichocarpa] 97 2e-18
ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isofo... 92 7e-17
gb|ERN14569.1| hypothetical protein AMTR_s00038p00125360 [Ambore... 91 1e-16
gb|EMS49716.1| RNA-binding protein 40 [Triticum urartu] 90 3e-16
>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
gi|223535277|gb|EEF36954.1| RNA binding protein,
putative [Ricinus communis]
Length = 450
Score = 122 bits (307), Expect = 4e-26
Identities = 65/96 (67%), Positives = 72/96 (75%)
Frame = +2
Query: 188 PPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDK 367
PP TVA KPHLADL +D+K + SR +KS RKRVR+EAIVGP VDK
Sbjct: 208 PPPTVAGKPHLADLSSSEAEMESSDEDIDNKTHPV--SREIKSRRKRVRQEAIVGPGVDK 265
Query: 368 DVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPK 475
DV HEAVG+KPS+LVPKEIPVIKKKNPVLQIKIAPK
Sbjct: 266 DVVHEAVGLKPSSLVPKEIPVIKKKNPVLQIKIAPK 301
>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
vinifera]
Length = 463
Score = 118 bits (295), Expect = 9e-25
Identities = 63/100 (63%), Positives = 69/100 (69%)
Frame = +2
Query: 188 PPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDK 367
PP A +P+L DL VD KA S G R K GRKRV+REAI GP VDK
Sbjct: 219 PPPPEAARPNLEDLSSGESEMESSDEEVDGKAYSPGPPRETKPGRKRVKREAIAGPGVDK 278
Query: 368 DVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPKSNSE 487
DVAHEAVGVKP+ LVPKEIP+IKKKNPVLQIKIAPK +E
Sbjct: 279 DVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVITE 318
>emb|CBI36672.3| unnamed protein product [Vitis vinifera]
Length = 263
Score = 118 bits (295), Expect = 9e-25
Identities = 63/100 (63%), Positives = 69/100 (69%)
Frame = +2
Query: 188 PPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDK 367
PP A +P+L DL VD KA S G R K GRKRV+REAI GP VDK
Sbjct: 19 PPPPEAARPNLEDLSSGESEMESSDEEVDGKAYSPGPPRETKPGRKRVKREAIAGPGVDK 78
Query: 368 DVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPKSNSE 487
DVAHEAVGVKP+ LVPKEIP+IKKKNPVLQIKIAPK +E
Sbjct: 79 DVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVITE 118
>emb|CAN75157.1| hypothetical protein VITISV_042644 [Vitis vinifera]
Length = 408
Score = 118 bits (295), Expect = 9e-25
Identities = 63/100 (63%), Positives = 69/100 (69%)
Frame = +2
Query: 188 PPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDK 367
PP A +P+L DL VD KA S G R K GRKRV+REAI GP VDK
Sbjct: 27 PPPPEAARPNLEDLSSGESEMESSDEEVDGKAYSPGPPRETKPGRKRVKREAIAGPGVDK 86
Query: 368 DVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPKSNSE 487
DVAHEAVGVKP+ LVPKEIP+IKKKNPVLQIKIAPK +E
Sbjct: 87 DVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVITE 126
>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
gi|298205172|emb|CBI17231.3| unnamed protein product
[Vitis vinifera]
Length = 463
Score = 117 bits (292), Expect = 2e-24
Identities = 62/100 (62%), Positives = 68/100 (68%)
Frame = +2
Query: 188 PPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDK 367
PP A +P+L DL VD A S G R K GRKRV+REAIVGP VDK
Sbjct: 219 PPPPEAARPNLEDLSSGESEMESSDEEVDGNAYSTGPPRETKPGRKRVKREAIVGPGVDK 278
Query: 368 DVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPKSNSE 487
DVAHEAVGVKP+ LVPKEIP+IKKKNPVLQIKI PK +E
Sbjct: 279 DVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIVPKVITE 318
>emb|CAN75183.1| hypothetical protein VITISV_040912 [Vitis vinifera]
Length = 562
Score = 116 bits (290), Expect = 3e-24
Identities = 62/100 (62%), Positives = 68/100 (68%)
Frame = +2
Query: 188 PPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDK 367
PP A +P+L DL VD A S G R K GRKRV+REAIVGP VDK
Sbjct: 27 PPPPEAARPNLEDLSSGESEMESSDEEVDGXAYSTGPPRETKPGRKRVKREAIVGPGVDK 86
Query: 368 DVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPKSNSE 487
DVAHEAVGVKP+ LVPKEIP+IKKKNPVLQIKI PK +E
Sbjct: 87 DVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIXPKVITE 126
>gb|EMJ08652.1| hypothetical protein PRUPE_ppa005530mg [Prunus persica]
Length = 456
Score = 105 bits (263), Expect = 4e-21
Identities = 59/96 (61%), Positives = 68/96 (70%)
Frame = +2
Query: 188 PPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDK 367
PP +A KP ADL +D K SS GTSR G+KRV+REAIVGPAVDK
Sbjct: 217 PPPPLAAKPPSADLSSEESEMESSDEEIDGKPSS-GTSR----GQKRVKREAIVGPAVDK 271
Query: 368 DVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPK 475
DVAHE VG+KP+ LVPKE P+IKKKNP++QIKIAPK
Sbjct: 272 DVAHEDVGLKPAILVPKERPMIKKKNPIVQIKIAPK 307
>gb|EEE95068.2| hypothetical protein POPTR_0013s05120g [Populus trichocarpa]
Length = 479
Score = 105 bits (261), Expect = 8e-21
Identities = 56/96 (58%), Positives = 66/96 (68%)
Frame = +2
Query: 188 PPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDK 367
PP + E LA+ VDDKA G S AVK RKR++R+AIVGPA DK
Sbjct: 236 PPPCLTENSSLAEQSSSESEMESSDEEVDDKAP-YGASGAVKQRRKRIKRKAIVGPAADK 294
Query: 368 DVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPK 475
DV HE+VG+KP++LVPKEIP+IKKKN VLQIKIAPK
Sbjct: 295 DVVHESVGLKPASLVPKEIPIIKKKNTVLQIKIAPK 330
>ref|XP_002319145.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 105 bits (261), Expect = 8e-21
Identities = 56/96 (58%), Positives = 66/96 (68%)
Frame = +2
Query: 188 PPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDK 367
PP + E LA+ VDDKA G S AVK RKR++R+AIVGPA DK
Sbjct: 103 PPPCLTENSSLAEQSSSESEMESSDEEVDDKAP-YGASGAVKQRRKRIKRKAIVGPAADK 161
Query: 368 DVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPK 475
DV HE+VG+KP++LVPKEIP+IKKKN VLQIKIAPK
Sbjct: 162 DVVHESVGLKPASLVPKEIPIIKKKNTVLQIKIAPK 197
>gb|ESR56594.1| hypothetical protein CICLE_v10020067mg [Citrus clementina]
gi|557545617|gb|ESR56595.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
Length = 461
Score = 104 bits (259), Expect = 1e-20
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = +2
Query: 272 DDKASSLGTSRAVKSGRKRVRREAIVGPAVDKDVAHEAVGVKPSALVPKEIPVIKKKNPV 451
+DK +S G S K GRKR RRE+IVGPA++KDVAHEAVGVKP+ L KEIPVIKKKNPV
Sbjct: 245 NDKGNSFGNSEVAKPGRKRARRESIVGPAINKDVAHEAVGVKPATLTRKEIPVIKKKNPV 304
Query: 452 LQIKIAPKSN 481
LQIKI PK++
Sbjct: 305 LQIKITPKAS 314
>gb|EOY10725.1| RNA-binding family protein isoform 6 [Theobroma cacao]
Length = 436
Score = 104 bits (259), Expect = 1e-20
Identities = 54/95 (56%), Positives = 63/95 (66%)
Frame = +2
Query: 191 PTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDKD 370
P + +PH AD V+DK ++ KS RKR RREAIVGPA+DK
Sbjct: 241 PASTPTEPHFADASSSESEMESSDEEVNDKGTA-------KSARKRARREAIVGPAIDKS 293
Query: 371 VAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPK 475
VAHEAVGVKP+ L+PKEIP IKKKNP+LQIKIAPK
Sbjct: 294 VAHEAVGVKPATLIPKEIPFIKKKNPILQIKIAPK 328
>gb|EOY10724.1| RNA-binding family protein isoform 5 [Theobroma cacao]
Length = 345
Score = 104 bits (259), Expect = 1e-20
Identities = 54/95 (56%), Positives = 63/95 (66%)
Frame = +2
Query: 191 PTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDKD 370
P + +PH AD V+DK ++ KS RKR RREAIVGPA+DK
Sbjct: 107 PASTPTEPHFADASSSESEMESSDEEVNDKGTA-------KSARKRARREAIVGPAIDKS 159
Query: 371 VAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPK 475
VAHEAVGVKP+ L+PKEIP IKKKNP+LQIKIAPK
Sbjct: 160 VAHEAVGVKPATLIPKEIPFIKKKNPILQIKIAPK 194
>gb|EOY10723.1| RNA-binding family protein isoform 4 [Theobroma cacao]
Length = 487
Score = 104 bits (259), Expect = 1e-20
Identities = 54/95 (56%), Positives = 63/95 (66%)
Frame = +2
Query: 191 PTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDKD 370
P + +PH AD V+DK ++ KS RKR RREAIVGPA+DK
Sbjct: 241 PASTPTEPHFADASSSESEMESSDEEVNDKGTA-------KSARKRARREAIVGPAIDKS 293
Query: 371 VAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPK 475
VAHEAVGVKP+ L+PKEIP IKKKNP+LQIKIAPK
Sbjct: 294 VAHEAVGVKPATLIPKEIPFIKKKNPILQIKIAPK 328
>gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508718824|gb|EOY10721.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508718825|gb|EOY10722.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 479
Score = 104 bits (259), Expect = 1e-20
Identities = 54/95 (56%), Positives = 63/95 (66%)
Frame = +2
Query: 191 PTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDKD 370
P + +PH AD V+DK ++ KS RKR RREAIVGPA+DK
Sbjct: 241 PASTPTEPHFADASSSESEMESSDEEVNDKGTA-------KSARKRARREAIVGPAIDKS 293
Query: 371 VAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPK 475
VAHEAVGVKP+ L+PKEIP IKKKNP+LQIKIAPK
Sbjct: 294 VAHEAVGVKPATLIPKEIPFIKKKNPILQIKIAPK 328
>ref|XP_004139973.1| PREDICTED: RNA-binding protein 40-like [Cucumis sativus]
Length = 359
Score = 104 bits (259), Expect = 1e-20
Identities = 55/110 (50%), Positives = 70/110 (63%)
Frame = +2
Query: 146 PHSPTRSVSISLFSPPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRK 325
P P+ S+++ PP T + + ++ V+ K + G S+ KSG K
Sbjct: 104 PAPPSPSLTLPPLPPPVTT--RSQVTNMPSDESEMESSEEDVEGKYNPSGVSKTAKSGYK 161
Query: 326 RVRREAIVGPAVDKDVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPK 475
R R E IVGP +DKDVAHEAVGVKPS LVPKEIP+IKKKNPV+QI+IAPK
Sbjct: 162 RPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQIRIAPK 211
>gb|EEE99784.2| RNA recognition motif-containing family protein, partial [Populus
trichocarpa]
Length = 420
Score = 101 bits (251), Expect = 1e-19
Identities = 55/96 (57%), Positives = 65/96 (67%)
Frame = +2
Query: 188 PPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDK 367
PP ++EK LA+ + + S RAVK RKRV+REAIVGPA DK
Sbjct: 224 PPPRISEKSPLAEQSSS-----------ESEMESSDEVRAVKPRRKRVKREAIVGPAADK 272
Query: 368 DVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPK 475
D+ HEAVG+KP+ LVPKEIPVIKKKNPVLQIKIAP+
Sbjct: 273 DIVHEAVGLKPAFLVPKEIPVIKKKNPVLQIKIAPR 308
>ref|XP_002325403.1| predicted protein [Populus trichocarpa]
Length = 420
Score = 97.1 bits (240), Expect = 2e-18
Identities = 54/101 (53%), Positives = 65/101 (64%)
Frame = +2
Query: 155 PTRSVSISLFSPPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVR 334
P + + + +PP ++EK LA+ DDKA S AVK RKRV+
Sbjct: 218 PCSTCASTTTTPPPCISEKSPLAEQSSSESEMESSDEEFDDKAL-YEASGAVKPRRKRVK 276
Query: 335 REAIVGPAVDKDVAHEAVGVKPSALVPKEIPVIKKKNPVLQ 457
REAIVGPA DKD+ HEAVG+KP+ LVPKEIPVIKKKNPVLQ
Sbjct: 277 REAIVGPAADKDIVHEAVGLKPAFLVPKEIPVIKKKNPVLQ 317
>ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isoform X1 [Cicer arietinum]
Length = 459
Score = 92.0 bits (227), Expect = 7e-17
Identities = 51/98 (52%), Positives = 64/98 (65%)
Frame = +2
Query: 188 PPTTVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDK 367
PP +V KP AD+ + + +R SGRKR RREAIVGPA+DK
Sbjct: 224 PPHSVTVKPQSADMSSDESEM--------ESSDEEDGARTESSGRKRARREAIVGPAIDK 275
Query: 368 DVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPKSN 481
DVAHE+VGVKP+ L+PKEIP+I KKN VL+I IAPK++
Sbjct: 276 DVAHESVGVKPATLIPKEIPMI-KKNHVLKINIAPKAS 312
>gb|ERN14569.1| hypothetical protein AMTR_s00038p00125360 [Amborella trichopoda]
Length = 471
Score = 90.9 bits (224), Expect = 1e-16
Identities = 53/97 (54%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = +2
Query: 188 PPTTVA-EKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKSGRKRVRREAIVGPAVD 364
PP V EKPH AD+ D+ + ++ V S RKRV+R AIVGPAVD
Sbjct: 230 PPDPVGVEKPHRADISSDESELES-----SDEGDTDEKNQTVGSARKRVKRVAIVGPAVD 284
Query: 365 KDVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPK 475
KDV+HEAVGVKP ++VPK I IKKKN VLQIKI PK
Sbjct: 285 KDVSHEAVGVKPISVVPKGITAIKKKNSVLQIKITPK 321
>gb|EMS49716.1| RNA-binding protein 40 [Triticum urartu]
Length = 551
Score = 89.7 bits (221), Expect = 3e-16
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
Frame = +2
Query: 155 PTRSVSISLFSPPT------TVAEKPHLADLXXXXXXXXXXXXXVDDKASSLGTSRAVKS 316
PT +S + +PP ++AEK HLADL VD +
Sbjct: 214 PTPPLSSQVPAPPPPPPPQPSMAEKLHLADLSSDESEMESSDEDVDTRKV---------- 263
Query: 317 GRKRVRREAIVGPAVDKDVAHEAVGVKPSALVPKEIPVIKKKNPVLQIKIAPKS 478
KR + EAIVGPAVD+ VAHE+VGVKP+ALVP E+ VIKKKNP+LQIK+ PK+
Sbjct: 264 --KRAKHEAIVGPAVDRSVAHESVGVKPTALVPNELQVIKKKNPILQIKLVPKA 315