BLASTX nr result

ID: Jatropha_contig00036063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00036063
         (569 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514028.1| conserved hypothetical protein [Ricinus comm...    69   1e-09
ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medic...    59   6e-07
gb|EOY15433.1| Ubiquitin-specific protease 16, putative isoform ...    57   2e-06
gb|EOY15432.1| Ubiquitin-specific protease 16, putative isoform ...    57   2e-06
ref|XP_004501631.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    56   5e-06

>ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
           gi|223547114|gb|EEF48611.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1060

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 40/78 (51%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = +3

Query: 324 MHVTGDLGFSSXXXXXXXXXXXIGFVIRRKWRLSIARQEEIKRXXXXXXXXXXXXXXXXT 503
           MHVT DLGFSS           IG +IRRKWRLSIAR EEIKR                T
Sbjct: 1   MHVTRDLGFSSLVLVLSLLFPVIGLIIRRKWRLSIARNEEIKRLLVLASEETARAELEAT 60

Query: 504 VSYVAVSASKNN-YQCAV 554
           VSY  V  S+N+ YQCAV
Sbjct: 61  VSYGVVPVSRNSYYQCAV 78


>ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355491977|gb|AES73180.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 1116

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 35/81 (43%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +3

Query: 324 MHVTGDLGFSSXXXXXXXXXXX-IGFVIRRKWRLSIARQEEIKRXXXXXXXXXXXXXXXX 500
           M VTGDLGF S            IGFVIRRKW++++AR EEIKR                
Sbjct: 1   MRVTGDLGFRSLVLVVVCVVVPVIGFVIRRKWQIAVARNEEIKRLLILAAEETARVERET 60

Query: 501 TVSYVAVSASKNNYQCAVLLF 563
             S  AV ++ NNYQCA+  F
Sbjct: 61  LYSSGAVVSATNNYQCALCYF 81


>gb|EOY15433.1| Ubiquitin-specific protease 16, putative isoform 2 [Theobroma
           cacao]
          Length = 1139

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 38/77 (49%)
 Frame = +3

Query: 324 MHVTGDLGFSSXXXXXXXXXXXIGFVIRRKWRLSIARQEEIKRXXXXXXXXXXXXXXXXT 503
           M + GDLG SS           IG  IRRKWRLS+ARQ EIKR                 
Sbjct: 1   MLLAGDLGISSLVLVVSLVLPLIGLFIRRKWRLSVARQAEIKRLLILASEEAARAELESL 60

Query: 504 VSYVAVSASKNNYQCAV 554
           + Y  +S S+N +QCA+
Sbjct: 61  LGYGTISVSRNYHQCAI 77


>gb|EOY15432.1| Ubiquitin-specific protease 16, putative isoform 1 [Theobroma
           cacao]
          Length = 1138

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 38/77 (49%)
 Frame = +3

Query: 324 MHVTGDLGFSSXXXXXXXXXXXIGFVIRRKWRLSIARQEEIKRXXXXXXXXXXXXXXXXT 503
           M + GDLG SS           IG  IRRKWRLS+ARQ EIKR                 
Sbjct: 1   MLLAGDLGISSLVLVVSLVLPLIGLFIRRKWRLSVARQAEIKRLLILASEEAARAELESL 60

Query: 504 VSYVAVSASKNNYQCAV 554
           + Y  +S S+N +QCA+
Sbjct: 61  LGYGTISVSRNYHQCAI 77


>ref|XP_004501631.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Cicer
           arietinum]
          Length = 1129

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 34/81 (41%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = +3

Query: 324 MHVTGDLGFSSXXXXXXXXXXX-IGFVIRRKWRLSIARQEEIKRXXXXXXXXXXXXXXXX 500
           M VTGDLGFSS            IGFVIRRKW+L++AR EEI R                
Sbjct: 1   MRVTGDLGFSSLVLVVVCVVLPVIGFVIRRKWKLAVARNEEINRLLILAAEETARAETEA 60

Query: 501 TVSYVAVSASKNNYQCAVLLF 563
           +  Y  V  +  NYQCA+  F
Sbjct: 61  SGVYGTVVPATYNYQCALCYF 81


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