BLASTX nr result

ID: Jatropha_contig00036005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00036005
         (560 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513323.1| membrane associated ring finger 1,8, putativ...    89   5e-16
ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|2...    86   6e-15
gb|EOY26338.1| RING/FYVE/PHD zinc finger superfamily protein iso...    71   2e-10
gb|EOY26336.1| RING/FYVE/PHD zinc finger superfamily protein iso...    71   2e-10
gb|EOY26335.1| RING/FYVE/PHD zinc finger superfamily protein iso...    71   2e-10
ref|XP_002310928.1| predicted protein [Populus trichocarpa] gi|1...    69   6e-10
gb|ESR41022.1| hypothetical protein CICLE_v10026281mg [Citrus cl...    66   5e-09
gb|ESR41021.1| hypothetical protein CICLE_v10026281mg [Citrus cl...    66   5e-09
gb|ESR41019.1| hypothetical protein CICLE_v10026281mg [Citrus cl...    66   5e-09
ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycin...    57   4e-06
ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...    56   5e-06

>ref|XP_002513323.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223547231|gb|EEF48726.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 256

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 45/72 (62%), Positives = 49/72 (68%)
 Frame = +1

Query: 343 MQLVSNDSHREDILESEPILSHSTVSHQIXXXXXXXXXXXXXXRDCDGDDLESVHIDETC 522
           MQLVSNDS +EDI E EPIL  S +  Q               +DCDGDDLESVH+DETC
Sbjct: 1   MQLVSNDSQKEDISEREPILRQSNIV-QRSEESSSSCEITSIGQDCDGDDLESVHVDETC 59

Query: 523 HLVNPDQPQCRI 558
           HLVNPDQPQCRI
Sbjct: 60  HLVNPDQPQCRI 71


>ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|222864413|gb|EEF01544.1|
           hypothetical protein POPTR_0010s25940g [Populus
           trichocarpa] gi|550330635|gb|ERP56669.1| hypothetical
           protein POPTR_0010s25940g [Populus trichocarpa]
           gi|550330636|gb|ERP56670.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 259

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 44/74 (59%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
 Frame = +1

Query: 343 MQLVSNDSHREDILESEPILSHSTVSHQIXXXXXXXXXXXXXXRDCD--GDDLESVHIDE 516
           MQLVSNDS +EDI ESEPILSHS +S                 RDC+   DD ES+ IDE
Sbjct: 1   MQLVSNDSRKEDISESEPILSHSNISQHSEEESPSSLEIKSLGRDCEIHVDDSESIQIDE 60

Query: 517 TCHLVNPDQPQCRI 558
           TCHLVNPD PQCRI
Sbjct: 61  TCHLVNPDHPQCRI 74


>gb|EOY26338.1| RING/FYVE/PHD zinc finger superfamily protein isoform 4, partial
           [Theobroma cacao]
          Length = 250

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 38/73 (52%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query: 343 MQLVSNDSHREDILESEPILSHSTVSHQIXXXXXXXXXXXXXXRDCD-GDDLESVHIDET 519
           MQLVSNDS +EDILESEPIL  S +S +                     DDLE +++DET
Sbjct: 1   MQLVSNDSQKEDILESEPILCQSDISQRSEECSSSCEITAIGGDSVVVDDDLEDINVDET 60

Query: 520 CHLVNPDQPQCRI 558
           CHLVN D PQCRI
Sbjct: 61  CHLVNADHPQCRI 73


>gb|EOY26336.1| RING/FYVE/PHD zinc finger superfamily protein isoform 2 [Theobroma
           cacao] gi|508779081|gb|EOY26337.1| RING/FYVE/PHD zinc
           finger superfamily protein isoform 2 [Theobroma cacao]
          Length = 258

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 38/73 (52%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query: 343 MQLVSNDSHREDILESEPILSHSTVSHQIXXXXXXXXXXXXXXRDCD-GDDLESVHIDET 519
           MQLVSNDS +EDILESEPIL  S +S +                     DDLE +++DET
Sbjct: 1   MQLVSNDSQKEDILESEPILCQSDISQRSEECSSSCEITAIGGDSVVVDDDLEDINVDET 60

Query: 520 CHLVNPDQPQCRI 558
           CHLVN D PQCRI
Sbjct: 61  CHLVNADHPQCRI 73


>gb|EOY26335.1| RING/FYVE/PHD zinc finger superfamily protein isoform 1 [Theobroma
           cacao]
          Length = 302

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 38/73 (52%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query: 343 MQLVSNDSHREDILESEPILSHSTVSHQIXXXXXXXXXXXXXXRDCD-GDDLESVHIDET 519
           MQLVSNDS +EDILESEPIL  S +S +                     DDLE +++DET
Sbjct: 1   MQLVSNDSQKEDILESEPILCQSDISQRSEECSSSCEITAIGGDSVVVDDDLEDINVDET 60

Query: 520 CHLVNPDQPQCRI 558
           CHLVN D PQCRI
Sbjct: 61  CHLVNADHPQCRI 73


>ref|XP_002310928.1| predicted protein [Populus trichocarpa] gi|118483623|gb|ABK93706.1|
           unknown [Populus trichocarpa]
           gi|222850748|gb|EEE88295.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 259

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 39/74 (52%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
 Frame = +1

Query: 343 MQLVSNDSHREDILESEPILSHSTVSHQIXXXXXXXXXXXXXXRDCDGD--DLESVHIDE 516
           MQLVSNDS ++D  ESEPILS S +                  RDCD    +LES+ IDE
Sbjct: 1   MQLVSNDSRQKDFSESEPILSQSNILQHSEEESSSSREIKSLGRDCDVHVAELESICIDE 60

Query: 517 TCHLVNPDQPQCRI 558
           T  LVNPDQPQCRI
Sbjct: 61  TSLLVNPDQPQCRI 74


>gb|ESR41022.1| hypothetical protein CICLE_v10026281mg [Citrus clementina]
          Length = 222

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 39/83 (46%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
 Frame = +1

Query: 343 MQLVSNDSHREDILESEPIL---------SHSTVSHQIXXXXXXXXXXXXXXRDC--DGD 489
           MQLVSNDSH EDI ESEPIL           S+ S                  DC    D
Sbjct: 1   MQLVSNDSHNEDISESEPILPQPDILRRSEESSSSCSSSSSSSSSSEITAVREDCVVSAD 60

Query: 490 DLESVHIDETCHLVNPDQPQCRI 558
           DL+++H+DET +LVN DQPQCRI
Sbjct: 61  DLQNLHVDETSYLVNDDQPQCRI 83


>gb|ESR41021.1| hypothetical protein CICLE_v10026281mg [Citrus clementina]
          Length = 180

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 39/83 (46%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
 Frame = +1

Query: 343 MQLVSNDSHREDILESEPIL---------SHSTVSHQIXXXXXXXXXXXXXXRDC--DGD 489
           MQLVSNDSH EDI ESEPIL           S+ S                  DC    D
Sbjct: 1   MQLVSNDSHNEDISESEPILPQPDILRRSEESSSSCSSSSSSSSSSEITAVREDCVVSAD 60

Query: 490 DLESVHIDETCHLVNPDQPQCRI 558
           DL+++H+DET +LVN DQPQCRI
Sbjct: 61  DLQNLHVDETSYLVNDDQPQCRI 83


>gb|ESR41019.1| hypothetical protein CICLE_v10026281mg [Citrus clementina]
           gi|557529770|gb|ESR41020.1| hypothetical protein
           CICLE_v10026281mg [Citrus clementina]
          Length = 268

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 39/83 (46%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
 Frame = +1

Query: 343 MQLVSNDSHREDILESEPIL---------SHSTVSHQIXXXXXXXXXXXXXXRDC--DGD 489
           MQLVSNDSH EDI ESEPIL           S+ S                  DC    D
Sbjct: 1   MQLVSNDSHNEDISESEPILPQPDILRRSEESSSSCSSSSSSSSSSEITAVREDCVVSAD 60

Query: 490 DLESVHIDETCHLVNPDQPQCRI 558
           DL+++H+DET +LVN DQPQCRI
Sbjct: 61  DLQNLHVDETSYLVNDDQPQCRI 83


>ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycine max]
           gi|255638130|gb|ACU19379.1| unknown [Glycine max]
          Length = 257

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +1

Query: 343 MQLVSNDSHREDILESEPILSHSTVSHQIXXXXXXXXXXXXXXRDCDGDD-LESVHIDET 519
           MQL SN   +E+  ESEPIL+H  +                      GDD L++V +DET
Sbjct: 1   MQLASNGD-KEECSESEPILNHHHLHLPPPGESSFSCEIIPISAAASGDDDLQNVRVDET 59

Query: 520 CHLVNPDQPQCRI 558
           CHLVN DQPQCRI
Sbjct: 60  CHLVNADQPQCRI 72


>ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1 [Vitis vinifera]
           gi|297735744|emb|CBI18431.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
 Frame = +1

Query: 343 MQLVSNDSHREDILESEPILSHSTVSHQIXXXXXXXXXXXXXXRDC---DGDDLESVHID 513
           MQLVSND   ED  E+EPIL  S +  ++               DC   DGD LE++  D
Sbjct: 1   MQLVSNDRQTEDGSETEPILCQSNIEQRLEESSTSCEIRTVEV-DCSIVDGD-LENLDTD 58

Query: 514 ETCHLVNPDQPQCRI 558
           E C LVN DQPQCRI
Sbjct: 59  ENCALVNADQPQCRI 73


Top