BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00035909
         (539 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532083.1| pentatricopeptide repeat-containing protein,...   105   6e-21
gb|EOY20099.1| Pentatricopeptide repeat (PPR) superfamily protei...    75   9e-12
gb|ESR35501.1| hypothetical protein CICLE_v10004323mg [Citrus cl...    72   8e-11
ref|XP_004306550.1| PREDICTED: pentatricopeptide repeat-containi...    69   9e-10
ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|2...    56   6e-06

>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 841

 Score =  105 bits (262), Expect = 6e-21
 Identities = 59/124 (47%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
 Frame = +1

Query: 184 MFYRSRLCPRKLYTLTRNPSSRPPFQAFNSLTSNSNTIVNIDTCFNFNYPIYSLCRSSIL 363
           MFYR RLCP  LY L +NP  +P F A  S  S+  T   IDT F FN P   L      
Sbjct: 1   MFYRGRLCPPHLYKLAKNPGYKPYFHASISQNSSFRTNGVIDTWFQFNSPRSILGLHLFP 60

Query: 364 QFFRLLKTPKFAIYS------DFCGTNPYFVRNYCSAKNNTGSGSSQWTEDIQYLDESGG 525
             F L K P F  ++       +C  + YF RNYCS   N G GS++WTEDI+YLDESG 
Sbjct: 61  SIFSLSKNPNFLFHTKYATDIPYCSKDSYFARNYCSGNINEG-GSAKWTEDIEYLDESGS 119

Query: 526 VIYS 537
           VIYS
Sbjct: 120 VIYS 123


>gb|EOY20099.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 820

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 53/115 (46%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
 Frame = +1

Query: 199 RLCPRKLY-TLTRNPSSRPPFQAFNSLTSNSNTIVNIDTC-FNFNYPIYSLCRSSILQFF 372
           R CPR LY TLT NPSS         + S+ N    ID C   F++   S+    I  F 
Sbjct: 8   RFCPRNLYITLTLNPSSS------RKVNSSKN---GIDKCSITFSFFSSSMGIDQISPFV 58

Query: 373 RLLKTPKFAIYSDFCGTNPYFVRNYCSAKNNTGSGSSQWTEDIQYLDESGGVIYS 537
            LLKTPKF        TNP FVR+YCS          +WTEDI+YLDESG VIYS
Sbjct: 59  PLLKTPKFV-------TNPTFVRSYCSR---------EWTEDIEYLDESGTVIYS 97


>gb|ESR35501.1| hypothetical protein CICLE_v10004323mg [Citrus clementina]
          Length = 827

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
 Frame = +1

Query: 199 RLCPRKLY-TLTRNPSSRPPFQAFNSLTSNSNTIVNIDTCFNFNYPIYSLCRSSILQFFR 375
           +LCPR LY +LT+NP+ R PF        +SN I ++D  FN  + I +   SS L +  
Sbjct: 7   KLCPRNLYLSLTKNPNFRYPF--------HSNFIHHLD--FNHKF-IKNTSFSSRLDYGE 55

Query: 376 LLKTPKFAIYSDFCGTNPYFVRNYCSAKNNTGSGSSQWTEDIQYLDESGGVIYS 537
                K AI+       P +VR+YCS K+  G   ++WTE+I+YLDESG VIY+
Sbjct: 56  TQNFVKDAIFF----RKPNYVRSYCSGKSGDGEKCNEWTEEIEYLDESGSVIYT 105


>ref|XP_004306550.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 844

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
 Frame = +1

Query: 184 MFYRSRLCPRKLYTLTRNPSSRPPFQAFNSLTSNSNTIVNIDTCFNFNYPIYSLCRSSIL 363
           M YR +LCPR    L++NP+  P F  FNS  +     +N       +Y   S   SSIL
Sbjct: 1   MIYRRKLCPRNFGRLSKNPTLNPAFPNFNSYPNLCTRELN-------SYVGSSRFWSSIL 53

Query: 364 QFFRLLKTPKFA--IYSDFCGTNPY---------------FVRNYCSAKNNTGSGSSQWT 492
                L +PK++  I  +  G++ +               FVRNYCS KN     S +WT
Sbjct: 54  G--SSLISPKYSVPINPNLVGSSGFSRLNFSENSLSVGCDFVRNYCSGKN-----SDEWT 106

Query: 493 EDIQYLDESGGVIYS 537
           E+I+YLDESG VIY+
Sbjct: 107 EEIEYLDESGSVIYT 121


>ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|222865192|gb|EEF02323.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 785

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +1

Query: 433 FVRNYCSAKNNTGSGSSQWTEDIQYLDESGGVIYS 537
           FVRNYC+ KN   +GS +WTEDI+YLDESG VIYS
Sbjct: 30  FVRNYCAGKNGE-AGSGEWTEDIEYLDESGSVIYS 63