BLASTX nr result

ID: Jatropha_contig00035898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00035898
         (537 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298222.1| predicted protein [Populus trichocarpa]            68   1e-09
ref|XP_002516024.1| 30S ribosomal protein S17, putative [Ricinus...    58   1e-06

>ref|XP_002298222.1| predicted protein [Populus trichocarpa]
          Length = 160

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = +1

Query: 85  PFLHGTTPISHLSKPTSVFSLQPQKPFTSVPPIRAMRSMQASGFVAT 225
           PFLHGTT +SHLSKPTS  +L+P KPFT +PPIRAM+S+Q     AT
Sbjct: 19  PFLHGTTQLSHLSKPTSSLTLRPAKPFTFLPPIRAMKSLQGKVVCAT 65


>ref|XP_002516024.1| 30S ribosomal protein S17, putative [Ricinus communis]
           gi|223544929|gb|EEF46444.1| 30S ribosomal protein S17,
           putative [Ricinus communis]
          Length = 152

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/47 (57%), Positives = 35/47 (74%)
 Frame = +1

Query: 85  PFLHGTTPISHLSKPTSVFSLQPQKPFTSVPPIRAMRSMQASGFVAT 225
           PFL+GT P+S+LSKPTS  SLQ   PF+ +PP+RAM+S+Q     AT
Sbjct: 15  PFLNGTAPLSNLSKPTSSLSLQHPNPFSFMPPVRAMKSIQGRVVCAT 61


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