BLASTX nr result
ID: Jatropha_contig00035802
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00035802
(467 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302112.1| predicted protein [Populus trichocarpa] 101 1e-19
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides] 100 2e-19
gb|ESR57306.1| hypothetical protein CICLE_v10021605mg [Citrus cl... 100 3e-19
gb|ESR57305.1| hypothetical protein CICLE_v10021605mg [Citrus cl... 100 3e-19
gb|ESR57304.1| hypothetical protein CICLE_v10021605mg [Citrus cl... 100 3e-19
gb|EEE81385.2| Ribosome recycling factor family protein [Populus... 99 5e-19
gb|EOX94756.1| Ribosome recycling factor isoform 3 [Theobroma ca... 89 7e-16
gb|EOX94755.1| Ribosome recycling factor isoform 2 [Theobroma ca... 89 7e-16
gb|EOX94754.1| Ribosome recycling factor isoform 1 [Theobroma ca... 89 7e-16
ref|XP_004290648.1| PREDICTED: ribosome-recycling factor, chloro... 70 3e-10
gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea] 66 5e-09
emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera] 65 7e-09
emb|CBI28691.3| unnamed protein product [Vitis vinifera] 64 1e-08
ref|XP_004158409.1| PREDICTED: ribosome-recycling factor, chloro... 60 3e-07
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro... 60 3e-07
gb|AFK38022.1| unknown [Medicago truncatula] 60 4e-07
ref|XP_003590639.1| Ribosome-recycling factor [Medicago truncatu... 60 4e-07
ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloro... 58 1e-06
ref|XP_004247171.1| PREDICTED: ribosome-recycling factor, chloro... 58 1e-06
ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloro... 58 1e-06
>ref|XP_002302112.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 101 bits (251), Expect = 1e-19
Identities = 60/113 (53%), Positives = 72/113 (63%), Gaps = 13/113 (11%)
Frame = +2
Query: 149 MASPFSSTA---PLPSTFHSNPSSPKALFSVTGSFCRASHHAK------NSSIVRCWSSA 301
MA+PFSS PL S F NP+ PKAL S+TGSF R H AK ++ V WSS+
Sbjct: 1 MAAPFSSPTTPPPLRSIFQPNPNPPKALLSLTGSFHRGPHRAKVCYNSIGATSVSLWSSS 60
Query: 302 SNYT----GGVKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
+NY+ G KL KP+ VK+LLQ RRGVVR AT+EEIEA KS +E D K R
Sbjct: 61 ANYSSLRNGSTKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGR 113
>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 286
Score = 100 bits (249), Expect = 2e-19
Identities = 60/113 (53%), Positives = 72/113 (63%), Gaps = 13/113 (11%)
Frame = +2
Query: 149 MASPFSSTA---PLPSTFHSNPSSPKALFSVTGSFCRASHHAK------NSSIVRCWSSA 301
MA+PFSS PL S F NP+ PKAL S+TGSF R H AK ++ V WSS+
Sbjct: 1 MAAPFSSPTTPPPLRSIFQPNPNPPKALLSLTGSFHRGPHRAKVGYNSIGAASVSLWSSS 60
Query: 302 SNYT----GGVKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
+NY+ G KL KP+ VK+LLQ RRGVVR AT+EEIEA KS +E D K R
Sbjct: 61 ANYSSLRNGSSKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGR 113
>gb|ESR57306.1| hypothetical protein CICLE_v10021605mg [Citrus clementina]
Length = 218
Score = 99.8 bits (247), Expect = 3e-19
Identities = 58/103 (56%), Positives = 69/103 (66%), Gaps = 3/103 (2%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAK---NSSIVRCWSSASNYTGG 319
MA+ FSST P+ S F + PK L + S R + A +S VR WSSA+NY+
Sbjct: 1 MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60
Query: 320 VKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
VKL KPIVV+QL KR GVVRCAT+EEIEA KSS+EKDVKAR
Sbjct: 61 VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKAR 103
>gb|ESR57305.1| hypothetical protein CICLE_v10021605mg [Citrus clementina]
Length = 179
Score = 99.8 bits (247), Expect = 3e-19
Identities = 58/103 (56%), Positives = 69/103 (66%), Gaps = 3/103 (2%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAK---NSSIVRCWSSASNYTGG 319
MA+ FSST P+ S F + PK L + S R + A +S VR WSSA+NY+
Sbjct: 1 MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60
Query: 320 VKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
VKL KPIVV+QL KR GVVRCAT+EEIEA KSS+EKDVKAR
Sbjct: 61 VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKAR 103
>gb|ESR57304.1| hypothetical protein CICLE_v10021605mg [Citrus clementina]
Length = 276
Score = 99.8 bits (247), Expect = 3e-19
Identities = 58/103 (56%), Positives = 69/103 (66%), Gaps = 3/103 (2%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAK---NSSIVRCWSSASNYTGG 319
MA+ FSST P+ S F + PK L + S R + A +S VR WSSA+NY+
Sbjct: 1 MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60
Query: 320 VKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
VKL KPIVV+QL KR GVVRCAT+EEIEA KSS+EKDVKAR
Sbjct: 61 VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKAR 103
>gb|EEE81385.2| Ribosome recycling factor family protein [Populus trichocarpa]
Length = 286
Score = 99.0 bits (245), Expect = 5e-19
Identities = 59/113 (52%), Positives = 71/113 (62%), Gaps = 13/113 (11%)
Frame = +2
Query: 149 MASPFSSTA---PLPSTFHSNPSSPKALFSVTGSFCRASHHAK------NSSIVRCWSSA 301
MA+PFSS PL S F NP+ PKAL S+ GSF R H AK ++ V WSS+
Sbjct: 1 MAAPFSSPTTPPPLRSIFQPNPNPPKALLSLPGSFHRGPHRAKVCYNSIGATSVSLWSSS 60
Query: 302 SNYT----GGVKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
+NY+ G KL KP+ VK+LLQ RRGVVR AT+EEIEA KS +E D K R
Sbjct: 61 ANYSSLRNGSTKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGR 113
>gb|EOX94756.1| Ribosome recycling factor isoform 3 [Theobroma cacao]
Length = 285
Score = 88.6 bits (218), Expect = 7e-16
Identities = 55/107 (51%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAKNSSI---VRCWSSASNYT-- 313
MA+PFSST+ + S F NP+ PK+ S + SF + K S V WSSA+NY
Sbjct: 1 MAAPFSSTSTVGSIFRPNPNPPKSFLSPSDSFQKGFDCVKCRSTDVNVYSWSSAANYARL 60
Query: 314 --GGVKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
G KL KP VV L+KR GV+RCAT+EEIEA KSS+EKD KAR
Sbjct: 61 RHGASKLSGKPFVV---LRKRAGVLRCATIEEIEAEKSSIEKDAKAR 104
>gb|EOX94755.1| Ribosome recycling factor isoform 2 [Theobroma cacao]
Length = 300
Score = 88.6 bits (218), Expect = 7e-16
Identities = 55/107 (51%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAKNSSI---VRCWSSASNYT-- 313
MA+PFSST+ + S F NP+ PK+ S + SF + K S V WSSA+NY
Sbjct: 1 MAAPFSSTSTVGSIFRPNPNPPKSFLSPSDSFQKGFDCVKCRSTDVNVYSWSSAANYARL 60
Query: 314 --GGVKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
G KL KP VV L+KR GV+RCAT+EEIEA KSS+EKD KAR
Sbjct: 61 RHGASKLSGKPFVV---LRKRAGVLRCATIEEIEAEKSSIEKDAKAR 104
>gb|EOX94754.1| Ribosome recycling factor isoform 1 [Theobroma cacao]
Length = 277
Score = 88.6 bits (218), Expect = 7e-16
Identities = 55/107 (51%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAKNSSI---VRCWSSASNYT-- 313
MA+PFSST+ + S F NP+ PK+ S + SF + K S V WSSA+NY
Sbjct: 1 MAAPFSSTSTVGSIFRPNPNPPKSFLSPSDSFQKGFDCVKCRSTDVNVYSWSSAANYARL 60
Query: 314 --GGVKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
G KL KP VV L+KR GV+RCAT+EEIEA KSS+EKD KAR
Sbjct: 61 RHGASKLSGKPFVV---LRKRAGVLRCATIEEIEAEKSSIEKDAKAR 104
>ref|XP_004290648.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 281
Score = 70.1 bits (170), Expect = 3e-10
Identities = 49/108 (45%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAK--NSSIVRC-WSSASNYT-- 313
MA+ S P+ S + PKAL S+ S+ K S++ C WSSA++Y
Sbjct: 1 MATHLSPANPVRSILQPKQNPPKALLSIRDSYGAGLVWKKCQPSTVNVCSWSSAASYVTP 60
Query: 314 --GGVKLFTKPIVVK-QLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
G K PIVVK QLLQKR G VR AT+EEIEA KS +EKD K R
Sbjct: 61 PGGAAKFSGNPIVVKKQLLQKRAGTVRAATIEEIEAEKSVIEKDAKGR 108
>gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea]
Length = 278
Score = 65.9 bits (159), Expect = 5e-09
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 10/110 (9%)
Frame = +2
Query: 149 MASPFSSTAPLPST----FHSNPSSPKALFSVTGSFCRASHHAKNSSIVRCWSSASNY-- 310
MA+ FS T LPS F NP PK L S+ F S+ +S + R W+S+S+Y
Sbjct: 1 MATSFSPTPTLPSVRSSIFPQNP--PKPLLSLPEFFRGGSN---SSCVKRSWASSSSYVT 55
Query: 311 ---TGGVKLFTKPIVVK-QLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
+ ++ +P++ K LL +R G+VR AT+EEIEA K+++EKDVK R
Sbjct: 56 LKLSNAFRVSARPLLSKGTLLHRRMGIVRAATIEEIEAEKAAIEKDVKIR 105
>emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera]
Length = 222
Score = 65.5 bits (158), Expect = 7e-09
Identities = 45/107 (42%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAK---NSSIVRCWSSASNYT-- 313
MA FS P+ + F SP G +CR + K N I SA+NY
Sbjct: 1 MAMTFSPATPVRTIFQRKSLSPG------GCYCRGPGYEKCHLNIGIAFTLRSAANYXRL 54
Query: 314 --GGVKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
G + K IV K+ QKR G+ RCAT+EEIEA KSS+EKDVK R
Sbjct: 55 GDGAREYSGKLIVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKER 101
>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
Length = 274
Score = 64.3 bits (155), Expect = 1e-08
Identities = 44/107 (41%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAK---NSSIVRCWSSASNYT-- 313
MA FS P+ + F SP G +CR + K N I SA+NY
Sbjct: 1 MAMTFSPATPVRTIFQRKSLSPG------GCYCRGPGYEKCHLNIGIAFTLRSAANYVRL 54
Query: 314 --GGVKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
G + K V K+ QKR G+ RCAT+EEIEA KSS+EKDVK R
Sbjct: 55 GDGAREYSGKLFVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKER 101
>ref|XP_004158409.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
sativus]
Length = 270
Score = 60.1 bits (144), Expect = 3e-07
Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAKNSSIVR---CWSSASNYTG- 316
MA+PFS+TA + + NP PK+L S+ + + K SI W SASNY
Sbjct: 1 MATPFSATASIRRSLFQNPP-PKSLLSLR-DYNGGLNCVKCGSITAHLCSWKSASNYVRL 58
Query: 317 ---GVKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
+ + T+ V + + RR VVR AT+EEIEA K+ +EKDVKAR
Sbjct: 59 NRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKAR 105
>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 60.1 bits (144), Expect = 3e-07
Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAKNSSIVR---CWSSASNYTG- 316
MA+PFS+TA + + NP PK+L S+ + + K SI W SASNY
Sbjct: 1 MATPFSATASIRRSLFQNPP-PKSLLSLR-DYNGGLNCVKCGSITAHLCSWKSASNYVRL 58
Query: 317 ---GVKLFTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
+ + T+ V + + RR VVR AT+EEIEA K+ +EKDVKAR
Sbjct: 59 NRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKAR 105
>gb|AFK38022.1| unknown [Medicago truncatula]
Length = 262
Score = 59.7 bits (143), Expect = 4e-07
Identities = 43/100 (43%), Positives = 56/100 (56%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAKNSSIVRCWSSASNYTGGVKL 328
MA+ FSST PL S F + P PKAL S SF ++S+ V S S G
Sbjct: 1 MATSFSSTTPLRSIFQNLPVVPKALLSAHSSFTIK----RSSTYVTLKLSGS----GRHS 52
Query: 329 FTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
+K ++ L R+G VR AT+EEIEA K+S+E DVK+R
Sbjct: 53 LSKGLLT---LHTRKGFVRAATIEEIEAEKASIENDVKSR 89
>ref|XP_003590639.1| Ribosome-recycling factor [Medicago truncatula]
gi|217072182|gb|ACJ84451.1| unknown [Medicago
truncatula] gi|217072782|gb|ACJ84751.1| unknown
[Medicago truncatula] gi|355479687|gb|AES60890.1|
Ribosome-recycling factor [Medicago truncatula]
Length = 262
Score = 59.7 bits (143), Expect = 4e-07
Identities = 43/100 (43%), Positives = 56/100 (56%)
Frame = +2
Query: 149 MASPFSSTAPLPSTFHSNPSSPKALFSVTGSFCRASHHAKNSSIVRCWSSASNYTGGVKL 328
MA+ FSST PL S F + P PKAL S SF ++S+ V S S G
Sbjct: 1 MATSFSSTTPLRSIFQNLPIVPKALLSAHSSFTIK----RSSTYVTLKLSGS----GRHS 52
Query: 329 FTKPIVVKQLLQKRRGVVRCATLEEIEALKSSVEKDVKAR 448
+K ++ L R+G VR AT+EEIEA K+S+E DVK+R
Sbjct: 53 LSKGLLT---LHTRKGFVRAATIEEIEAEKASIENDVKSR 89
>ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Solanum
tuberosum]
Length = 267
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Frame = +2
Query: 242 FCRASHHAKNSSIVRCWSSASNYT----GGVKLFTKPIVVKQLLQKRRGVVRCATLEEIE 409
FC + ++V CWS+++NY+ G +L +P+V K KR G+VRCAT+EEIE
Sbjct: 26 FCFQDKFPTSGNVV-CWSASANYSSLWVGARRL--QPLV-KPSWGKRSGIVRCATIEEIE 81
Query: 410 ALKSSVEKDVKAR 448
A KSS+EKDVK R
Sbjct: 82 AEKSSIEKDVKER 94
>ref|XP_004247171.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform 2
[Solanum lycopersicum]
Length = 263
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Frame = +2
Query: 242 FCRASHHAKNSSIVRCWSSASNYT----GGVKLFTKPIVVKQLLQKRRGVVRCATLEEIE 409
FC + ++V CWS+++NY+ G +L +P+V K KR G+VRCAT+EEIE
Sbjct: 26 FCFQDKFPTSGNVV-CWSASANYSSLWVGARRL--QPLV-KPSWGKRSGIVRCATIEEIE 81
Query: 410 ALKSSVEKDVKAR 448
A KSS+EKDVK R
Sbjct: 82 AEKSSIEKDVKER 94
>ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform 1
[Solanum lycopersicum]
Length = 267
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Frame = +2
Query: 242 FCRASHHAKNSSIVRCWSSASNYT----GGVKLFTKPIVVKQLLQKRRGVVRCATLEEIE 409
FC + ++V CWS+++NY+ G +L +P+V K KR G+VRCAT+EEIE
Sbjct: 26 FCFQDKFPTSGNVV-CWSASANYSSLWVGARRL--QPLV-KPSWGKRSGIVRCATIEEIE 81
Query: 410 ALKSSVEKDVKAR 448
A KSS+EKDVK R
Sbjct: 82 AEKSSIEKDVKER 94