BLASTX nr result

ID: Jatropha_contig00035707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00035707
         (644 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERP64083.1| hypothetical protein POPTR_0002s06160g [Populus t...    62   1e-07
ref|XP_006348944.1| PREDICTED: protodermal factor 1-like [Solanu...    58   2e-06
ref|XP_004243231.1| PREDICTED: protodermal factor 1-like [Solanu...    57   4e-06

>gb|ERP64083.1| hypothetical protein POPTR_0002s06160g [Populus trichocarpa]
          Length = 308

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 29/46 (63%), Positives = 34/46 (73%)
 Frame = +2

Query: 35  MGKENSKQVSMLMWVLFAELLLQNVVVSVIASNFEEQKNYYSHDPH 172
           M K+ SKQ SMLMWVL A LL  N+   V+A+ FE+QKNYYS DPH
Sbjct: 36  MEKQESKQASMLMWVLAAGLLSHNLAFPVLATTFEDQKNYYSPDPH 81


>ref|XP_006348944.1| PREDICTED: protodermal factor 1-like [Solanum tuberosum]
          Length = 253

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = +2

Query: 35  MGKENSKQVSMLMWVLFAELLLQNVVVSVIA-SNFEEQKNYYSHDPH 172
           M K+ S Q S ++W  FA LLLQN+V+ V++ ++FEEQKNYY+ DPH
Sbjct: 1   MAKQRSNQSSRILWAAFAALLLQNLVIPVVSFASFEEQKNYYTPDPH 47


>ref|XP_004243231.1| PREDICTED: protodermal factor 1-like [Solanum lycopersicum]
          Length = 258

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = +2

Query: 35  MGKENSKQVSMLMWVLFAELLLQNVVVSVIA-SNFEEQKNYYSHDPH 172
           M K+ S Q S ++W  FA LLLQN+V+ V++ ++FEE+KNYY+ DPH
Sbjct: 1   MAKQRSNQSSRILWAAFAALLLQNLVIPVVSFASFEEEKNYYTPDPH 47


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