BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00035434
         (639 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   143   4e-67
gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [...   140   9e-63
gb|EOX97060.1| Pseudouridine synthase family protein isoform 2 [...   140   9e-63
gb|EOX97062.1| Pseudouridine synthase family protein isoform 4 [...   140   9e-63
gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [...   134   1e-61
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ...   138   3e-61
ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   139   1e-60
ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   133   1e-59
gb|ESQ35887.1| hypothetical protein EUTSA_v10007981mg [Eutrema s...   132   7e-56
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   132   7e-56
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   133   5e-55
gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   131   8e-55
ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arab...   130   8e-55
ref|NP_172451.2| pseudouridine synthase family protein [Arabidop...   130   1e-54
gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]                       130   1e-54
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-lik...   127   5e-54
ref|XP_006305124.1| hypothetical protein CARUB_v10009493mg [Caps...   129   1e-53
dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] g...   130   5e-53
ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   134   7e-53
gb|ESW20554.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   124   7e-53

>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 372

 Score =  143 bits (360), Expect(3) = 4e-67
 Identities = 79/105 (75%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
 Frame = +3

Query: 60  MTENVKHCLDTSVASLDRPSKIPKTQDLTVDDEDGEE-LQESGVIAQLMSPNPRLQRYLI 236
           MTEN KH LDT   S +RPSKI KTQD   D+E+GEE LQES  +A+ MS NP+LQRYLI
Sbjct: 1   MTENPKHSLDTE--SRNRPSKILKTQDFVDDNEEGEEELQESSFVAESMSSNPKLQRYLI 58

Query: 237 AVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           AVEYIGT+FAGSQKQLN RTVVGVLEEAF KFIGQ VS+SLSSRT
Sbjct: 59  AVEYIGTKFAGSQKQLNGRTVVGVLEEAFCKFIGQQVSVSLSSRT 103



 Score =  137 bits (345), Expect(3) = 4e-67
 Identities = 64/72 (88%), Positives = 68/72 (94%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVD+ERISKRKPGEVL PHEP+VVRRAVNHFLQKNEGDI V DVRCVP+
Sbjct: 104 DAGVHALSNVCHVDIERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDVRCVPS 163

Query: 575 DFHARYKACERT 610
           DFHAR+KA ERT
Sbjct: 164 DFHARFKAQERT 175



 Score = 22.3 bits (46), Expect(3) = 4e-67
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 600 ASARRYFYRLLSG 638
           A  R YFYR LSG
Sbjct: 171 AQERTYFYRFLSG 183


>gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  140 bits (354), Expect(2) = 9e-63
 Identities = 67/72 (93%), Positives = 69/72 (95%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEPSVVRRAVNHFLQK+EGDITV+DVRCVP 
Sbjct: 101 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDVRCVPN 160

Query: 575 DFHARYKACERT 610
           DFHARYKA ERT
Sbjct: 161 DFHARYKAQERT 172



 Score =  126 bits (316), Expect(2) = 9e-63
 Identities = 68/104 (65%), Positives = 80/104 (76%)
 Frame = +3

Query: 60  MTENVKHCLDTSVASLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYLIA 239
           M+EN KH L T+  S  RPSKIPKTQD +  +E+ E+ Q+       MS NPR+QRYL+A
Sbjct: 1   MSENPKHSLSTTPES-SRPSKIPKTQDHSDQEEEEEDKQQQ---ESSMSKNPRIQRYLVA 56

Query: 240 VEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           +EYIGTRF+GSQ+Q NCRTVVGVLEEAF KFIGQPVSI  SSRT
Sbjct: 57  IEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRT 100


>gb|EOX97060.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
          Length = 345

 Score =  140 bits (354), Expect(2) = 9e-63
 Identities = 67/72 (93%), Positives = 69/72 (95%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEPSVVRRAVNHFLQK+EGDITV+DVRCVP 
Sbjct: 101 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDVRCVPN 160

Query: 575 DFHARYKACERT 610
           DFHARYKA ERT
Sbjct: 161 DFHARYKAQERT 172



 Score =  126 bits (316), Expect(2) = 9e-63
 Identities = 68/104 (65%), Positives = 80/104 (76%)
 Frame = +3

Query: 60  MTENVKHCLDTSVASLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYLIA 239
           M+EN KH L T+  S  RPSKIPKTQD +  +E+ E+ Q+       MS NPR+QRYL+A
Sbjct: 1   MSENPKHSLSTTPES-SRPSKIPKTQDHSDQEEEEEDKQQQ---ESSMSKNPRIQRYLVA 56

Query: 240 VEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           +EYIGTRF+GSQ+Q NCRTVVGVLEEAF KFIGQPVSI  SSRT
Sbjct: 57  IEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRT 100


>gb|EOX97062.1| Pseudouridine synthase family protein isoform 4 [Theobroma cacao]
          Length = 341

 Score =  140 bits (354), Expect(2) = 9e-63
 Identities = 67/72 (93%), Positives = 69/72 (95%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEPSVVRRAVNHFLQK+EGDITV+DVRCVP 
Sbjct: 101 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDVRCVPN 160

Query: 575 DFHARYKACERT 610
           DFHARYKA ERT
Sbjct: 161 DFHARYKAQERT 172



 Score =  126 bits (316), Expect(2) = 9e-63
 Identities = 68/104 (65%), Positives = 80/104 (76%)
 Frame = +3

Query: 60  MTENVKHCLDTSVASLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYLIA 239
           M+EN KH L T+  S  RPSKIPKTQD +  +E+ E+ Q+       MS NPR+QRYL+A
Sbjct: 1   MSENPKHSLSTTPES-SRPSKIPKTQDHSDQEEEEEDKQQQ---ESSMSKNPRIQRYLVA 56

Query: 240 VEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           +EYIGTRF+GSQ+Q NCRTVVGVLEEAF KFIGQPVSI  SSRT
Sbjct: 57  IEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRT 100


>gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  134 bits (337), Expect(3) = 1e-61
 Identities = 66/72 (91%), Positives = 68/72 (94%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEPSVVRRAVNHFLQ +EGDITV+DVRCVP 
Sbjct: 101 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQ-SEGDITVIDVRCVPN 159

Query: 575 DFHARYKACERT 610
           DFHARYKA ERT
Sbjct: 160 DFHARYKAQERT 171



 Score =  126 bits (316), Expect(3) = 1e-61
 Identities = 68/104 (65%), Positives = 80/104 (76%)
 Frame = +3

Query: 60  MTENVKHCLDTSVASLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYLIA 239
           M+EN KH L T+  S  RPSKIPKTQD +  +E+ E+ Q+       MS NPR+QRYL+A
Sbjct: 1   MSENPKHSLSTTPES-SRPSKIPKTQDHSDQEEEEEDKQQQ---ESSMSKNPRIQRYLVA 56

Query: 240 VEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           +EYIGTRF+GSQ+Q NCRTVVGVLEEAF KFIGQPVSI  SSRT
Sbjct: 57  IEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRT 100



 Score = 23.9 bits (50), Expect(3) = 1e-61
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 600 ASARRYFYRLLSG 638
           A  R YFYRLLSG
Sbjct: 167 AQERTYFYRLLSG 179


>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
           tuberosum]
          Length = 389

 Score =  138 bits (347), Expect(2) = 3e-61
 Identities = 65/72 (90%), Positives = 68/72 (94%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPG+VL PHEP VV+RAVNHFLQKNEGDI V+DVRCVPA
Sbjct: 113 DAGVHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNEGDIMVIDVRCVPA 172

Query: 575 DFHARYKACERT 610
           DFHARYKA ERT
Sbjct: 173 DFHARYKAQERT 184



 Score =  124 bits (310), Expect(2) = 3e-61
 Identities = 66/110 (60%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
 Frame = +3

Query: 45  QPKHQMTENVKHCLDTSVASLDRPSKIPKTQDLTVDDE-DGEELQESGVIAQLMSPNPRL 221
           Q +  ++E  KH LD    S  RPSK PK  D   +D  +GEE +ES  + + M+PNPRL
Sbjct: 5   QSQPLISETNKHSLDQRPESPQRPSKFPKVNDDAGNDVLEGEEQKES--VTRTMNPNPRL 62

Query: 222 QRYLIAVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           QRYLIA+EYIGTRFAG+Q+Q NCRTVVGVL+EAF KF+GQPVS+  SSRT
Sbjct: 63  QRYLIAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFVGQPVSVFCSSRT 112


>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
           gi|297739525|emb|CBI29707.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  139 bits (350), Expect(2) = 1e-60
 Identities = 65/72 (90%), Positives = 68/72 (94%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEP+VVRRAVNHFLQKNEGD+ V+DVRCVP 
Sbjct: 112 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVPP 171

Query: 575 DFHARYKACERT 610
           DFHARYKA ERT
Sbjct: 172 DFHARYKARERT 183



 Score =  120 bits (301), Expect(2) = 1e-60
 Identities = 63/103 (61%), Positives = 78/103 (75%)
 Frame = +3

Query: 63  TENVKHCLDTSVASLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYLIAV 242
           +++ KH L+    S  RPSKI +T DL+    DGE  Q+  V ++ M+ NPR+QRYL+AV
Sbjct: 15  SDSPKHLLNRRSESPQRPSKIARTDDLS----DGE--QQDSVASKTMTQNPRVQRYLVAV 68

Query: 243 EYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           EYIGTRF+GSQ+QLNCRTV G L+EAFHKFIGQPVSI  SSRT
Sbjct: 69  EYIGTRFSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRT 111


>ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum
           lycopersicum]
          Length = 389

 Score =  133 bits (335), Expect(2) = 1e-59
 Identities = 63/72 (87%), Positives = 66/72 (91%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPG+VL PHEP VV+RAVNHFLQKN GDI V+DVRCVP 
Sbjct: 113 DAGVHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNAGDIMVIDVRCVPD 172

Query: 575 DFHARYKACERT 610
           DFHARYKA ERT
Sbjct: 173 DFHARYKAQERT 184



 Score =  123 bits (308), Expect(2) = 1e-59
 Identities = 65/105 (61%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
 Frame = +3

Query: 60  MTENVKHCLDTSVASLDRPSKIPKTQDLTVDDE-DGEELQESGVIAQLMSPNPRLQRYLI 236
           ++E  KH LD    S  RPSK+PK  D   +D  +GEE +ES  + + M+PNPRLQRYL+
Sbjct: 10  ISETNKHSLDQRPESPQRPSKLPKVNDDGGNDVVEGEEQKES--VTRTMNPNPRLQRYLL 67

Query: 237 AVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           A+EYIGTRFAG+Q+Q NCRTVVGVL+EAF KFIGQPVS+  SSRT
Sbjct: 68  AIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFIGQPVSVFCSSRT 112


>gb|ESQ35887.1| hypothetical protein EUTSA_v10007981mg [Eutrema salsugineum]
          Length = 368

 Score =  132 bits (333), Expect(2) = 7e-56
 Identities = 60/72 (83%), Positives = 68/72 (94%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEP VV+RAVNHFLQ+N+GD+ V+DVRCVP+
Sbjct: 109 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRNDGDVMVIDVRCVPS 168

Query: 575 DFHARYKACERT 610
           ++HARYKA ERT
Sbjct: 169 NYHARYKARERT 180



 Score =  111 bits (277), Expect(2) = 7e-56
 Identities = 62/109 (56%), Positives = 82/109 (75%), Gaps = 5/109 (4%)
 Frame = +3

Query: 60  MTENVKHCLDTSVA--SLDRPSKIPKTQDLTVDDEDGEELQE-SGVIAQL--MSPNPRLQ 224
           M+ N+KH LD+S +  SL+R SK+ +    + D+E+GEE +E  G++     +S NPR+Q
Sbjct: 1   MSGNLKHPLDSSASQESLERLSKVARFDGFS-DEEEGEEAEERQGLVVSEPELSMNPRVQ 59

Query: 225 RYLIAVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           RYL+A+EYIGTRF+GSQ+Q   RTVVGVL+EAFHKFIGQPV I  SSRT
Sbjct: 60  RYLVAIEYIGTRFSGSQQQATDRTVVGVLQEAFHKFIGQPVKIFCSSRT 108


>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  132 bits (332), Expect(2) = 7e-56
 Identities = 63/72 (87%), Positives = 66/72 (91%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEP VV +AVNHFLQK+EGD+TVVDVR VP 
Sbjct: 98  DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVHKAVNHFLQKHEGDVTVVDVRSVPN 157

Query: 575 DFHARYKACERT 610
           DFHARYKA ERT
Sbjct: 158 DFHARYKAQERT 169



 Score =  111 bits (278), Expect(2) = 7e-56
 Identities = 62/105 (59%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
 Frame = +3

Query: 60  MTENVKHCLDTSV-ASLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYLI 236
           MTEN KH L+ S+ +S  RP KI KT D     ++ E        A+ M+P P +QRYL+
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDELFHGDEEE--------AETMNPKPGIQRYLV 52

Query: 237 AVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           AVEYIGTRF GSQ+Q NCRTVVG LEEAF KFIGQPVS+  SSRT
Sbjct: 53  AVEYIGTRFYGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSRT 97


>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca
           subsp. vesca]
          Length = 350

 Score =  133 bits (334), Expect(2) = 5e-55
 Identities = 63/72 (87%), Positives = 67/72 (93%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVD+ERISKRKPGEVL PHEP VV+RAVNHFLQKNEGD+ VVDVR VPA
Sbjct: 92  DAGVHALSNVCHVDIERISKRKPGEVLPPHEPIVVQRAVNHFLQKNEGDVMVVDVRSVPA 151

Query: 575 DFHARYKACERT 610
           DFHAR+KA ERT
Sbjct: 152 DFHARFKAQERT 163



 Score =  108 bits (269), Expect(2) = 5e-55
 Identities = 62/104 (59%), Positives = 72/104 (69%)
 Frame = +3

Query: 60  MTENVKHCLDTSVASLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYLIA 239
           M+EN+KH L++   S  RPSKI KT       E+ E        A+ MS    +QRYLIA
Sbjct: 1   MSENLKHSLESRSQSPKRPSKISKTTS-----EEAE--------AESMSKPQGIQRYLIA 47

Query: 240 VEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           +EYIGTRF+GSQ+Q NCRTVVGVLEEAF KFIGQPVSI  SSRT
Sbjct: 48  IEYIGTRFSGSQQQSNCRTVVGVLEEAFRKFIGQPVSIFCSSRT 91


>gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 373

 Score =  131 bits (329), Expect(2) = 8e-55
 Identities = 59/72 (81%), Positives = 67/72 (93%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVD++R SKRKPGEVL PHEP+VV RAVNHFLQK++ D+TV+DVRCVP+
Sbjct: 103 DAGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQKHDSDLTVIDVRCVPS 162

Query: 575 DFHARYKACERT 610
           DFHARYKA ERT
Sbjct: 163 DFHARYKALERT 174



 Score =  109 bits (272), Expect(2) = 8e-55
 Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
 Frame = +3

Query: 60  MTENVKHCLDTSVASLDRPSKIPKTQDLT-VDDEDGEELQESGVIAQLMSPNPR--LQRY 230
           MT ++KH +D   +  +RPSK+ K +  T +  ED EE +E       M+ NPR  +QRY
Sbjct: 1   MTHSLKHSVDLECSDNNRPSKLSKIEHSTHIAHEDDEEEEEKE-----MTQNPRNGIQRY 55

Query: 231 LIAVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
            +A+EYIGTRF+GSQKQL CRTVVG LEEAF KF+G PVS+S SSRT
Sbjct: 56  FLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHPVSVSCSSRT 102


>ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arabidopsis lyrata subsp.
           lyrata] gi|297338368|gb|EFH68785.1| hypothetical protein
           ARALYDRAFT_471082 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  130 bits (327), Expect(2) = 8e-55
 Identities = 59/72 (81%), Positives = 67/72 (93%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEP VV+RAVNHFLQ+ +GD+ V+DVRCVP+
Sbjct: 106 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPS 165

Query: 575 DFHARYKACERT 610
           ++HARYKA ERT
Sbjct: 166 NYHARYKAQERT 177



 Score =  110 bits (274), Expect(2) = 8e-55
 Identities = 58/106 (54%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
 Frame = +3

Query: 60  MTENVKHCLDTSVA--SLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYL 233
           M++N+KH LD++V+  SL+R SK+ + +  + D+E+ EE Q       +   NPR+QRYL
Sbjct: 1   MSDNLKHPLDSTVSEESLERLSKVARIEGFS-DEEEAEEQQGLADSESMNPVNPRVQRYL 59

Query: 234 IAVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           +A+EYIGTRF+GSQ+Q   RTVVGVL++AFHKFIGQPV I  SSRT
Sbjct: 60  VAIEYIGTRFSGSQQQAKDRTVVGVLQDAFHKFIGQPVKIFCSSRT 105


>ref|NP_172451.2| pseudouridine synthase family protein [Arabidopsis thaliana]
           gi|332190374|gb|AEE28495.1| pseudouridine synthase
           family protein [Arabidopsis thaliana]
          Length = 372

 Score =  130 bits (327), Expect(2) = 1e-54
 Identities = 59/72 (81%), Positives = 67/72 (93%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEP VV+RAVNHFLQ+ +GD+ V+DVRCVP+
Sbjct: 105 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPS 164

Query: 575 DFHARYKACERT 610
           ++HARYKA ERT
Sbjct: 165 NYHARYKAQERT 176



 Score =  109 bits (272), Expect(2) = 1e-54
 Identities = 58/106 (54%), Positives = 77/106 (72%), Gaps = 2/106 (1%)
 Frame = +3

Query: 60  MTENVKHCLDTSVA--SLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYL 233
           M++N+KH LD + +  SL+R SK+ + +  +  DE+ EE Q    +  +   NPR+QRYL
Sbjct: 1   MSDNLKHPLDCTASEESLERLSKVARIEGFS--DEESEEQQGLADLESMNPVNPRVQRYL 58

Query: 234 IAVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           +A+EYIGTRF+GSQ+Q   RTVVGVL+EAFHKFIGQPV I  SSRT
Sbjct: 59  VAIEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFCSSRT 104


>gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]
          Length = 372

 Score =  130 bits (327), Expect(2) = 1e-54
 Identities = 59/72 (81%), Positives = 67/72 (93%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEP VV+RAVNHFLQ+ +GD+ V+DVRCVP+
Sbjct: 105 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPS 164

Query: 575 DFHARYKACERT 610
           ++HARYKA ERT
Sbjct: 165 NYHARYKAQERT 176



 Score =  109 bits (272), Expect(2) = 1e-54
 Identities = 58/106 (54%), Positives = 77/106 (72%), Gaps = 2/106 (1%)
 Frame = +3

Query: 60  MTENVKHCLDTSVA--SLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYL 233
           M++N+KH LD + +  SL+R SK+ + +  +  DE+ EE Q    +  +   NPR+QRYL
Sbjct: 1   MSDNLKHPLDCTASEESLERLSKVARIEGFS--DEESEEQQGLADLESMNPVNPRVQRYL 58

Query: 234 IAVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           +A+EYIGTRF+GSQ+Q   RTVVGVL+EAFHKFIGQPV I  SSRT
Sbjct: 59  VAIEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFCSSRT 104


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 369

 Score =  127 bits (319), Expect(2) = 5e-54
 Identities = 57/72 (79%), Positives = 67/72 (93%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVD++RISKR+PGEVL PHEP+VV RAVNHFLQK++ D+ V+DVRCVP+
Sbjct: 99  DAGVHALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDSDLMVIDVRCVPS 158

Query: 575 DFHARYKACERT 610
           DFHAR+KA ERT
Sbjct: 159 DFHARFKAQERT 170



 Score =  110 bits (275), Expect(2) = 5e-54
 Identities = 61/106 (57%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
 Frame = +3

Query: 60  MTENVKHCLDTSVASLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPR--LQRYL 233
           MT+N+KH +D   +   RPSKI K +  +  D D EE        + MS NPR  +QRYL
Sbjct: 1   MTQNLKHTVDLECSDNSRPSKISKIEYPSDSDIDEEE--------EGMSQNPRNGIQRYL 52

Query: 234 IAVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           +A+EYIGT F+GSQKQLN RTVVG LEEAF KF+GQPVS+S SSRT
Sbjct: 53  VAIEYIGTLFSGSQKQLNVRTVVGALEEAFSKFVGQPVSVSCSSRT 98


>ref|XP_006305124.1| hypothetical protein CARUB_v10009493mg [Capsella rubella]
           gi|482573835|gb|EOA38022.1| hypothetical protein
           CARUB_v10009493mg [Capsella rubella]
          Length = 370

 Score =  129 bits (324), Expect(2) = 1e-53
 Identities = 58/72 (80%), Positives = 67/72 (93%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEP VV++AVNHFLQ+ +GD+ V+DVRCVP+
Sbjct: 104 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQKAVNHFLQRKDGDVMVIDVRCVPS 163

Query: 575 DFHARYKACERT 610
           ++HARYKA ERT
Sbjct: 164 NYHARYKARERT 175



 Score =  107 bits (267), Expect(2) = 1e-53
 Identities = 61/107 (57%), Positives = 80/107 (74%), Gaps = 3/107 (2%)
 Frame = +3

Query: 60  MTENVKHCLDTSVA--SLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSP-NPRLQRY 230
           M++N+KH  DT+ +  S++R SK+ K +  + D+E+G    ES +    M+P NPRLQRY
Sbjct: 1   MSDNLKHHRDTTASQESVERLSKVAKIEGFS-DEEEGLVYSESELS---MNPGNPRLQRY 56

Query: 231 LIAVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           L+A+EYIGTRF+GSQ+Q   RTVVGVL+EAFHKFIGQPV I  SSRT
Sbjct: 57  LVAIEYIGTRFSGSQQQATDRTVVGVLQEAFHKFIGQPVKIFCSSRT 103


>dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana]
           gi|51971573|dbj|BAD44451.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 368

 Score =  130 bits (327), Expect(2) = 5e-53
 Identities = 59/72 (81%), Positives = 67/72 (93%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVDVERISKRKPGEVL PHEP VV+RAVNHFLQ+ +GD+ V+DVRCVP+
Sbjct: 101 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPS 160

Query: 575 DFHARYKACERT 610
           ++HARYKA ERT
Sbjct: 161 NYHARYKAQERT 172



 Score =  103 bits (258), Expect(2) = 5e-53
 Identities = 56/102 (54%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
 Frame = +3

Query: 72  VKHCLDTSVA--SLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYLIAVE 245
           +KH LD + +  SL+R SK+ + +  +  DE+ EE Q    +  +   NPR+QRYL+A+E
Sbjct: 1   LKHPLDCTASEESLERLSKVARIEGFS--DEESEEQQGLADLESMNPVNPRVQRYLVAIE 58

Query: 246 YIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           YIGTRF+GSQ+Q   RTVVGVL+EAFHKFIGQPV I  SSRT
Sbjct: 59  YIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFCSSRT 100


>ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Cicer
           arietinum]
          Length = 374

 Score =  134 bits (336), Expect(2) = 7e-53
 Identities = 62/72 (86%), Positives = 66/72 (91%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVD+ERISKRKPGEVL PHEP VVRRAVNHFLQK  GD+ V+DVRCVP+
Sbjct: 105 DAGVHALSNVCHVDIERISKRKPGEVLPPHEPVVVRRAVNHFLQKQNGDLMVIDVRCVPS 164

Query: 575 DFHARYKACERT 610
           DFHARYKA ERT
Sbjct: 165 DFHARYKAQERT 176



 Score =  100 bits (248), Expect(2) = 7e-53
 Identities = 57/105 (54%), Positives = 72/105 (68%), Gaps = 1/105 (0%)
 Frame = +3

Query: 60  MTENVKHCLDTSVAS-LDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYLI 236
           MT N KH ++    S  +RPSKI K +       DGE+ +E     + M+ + R+QRYL+
Sbjct: 1   MTHNPKHTVEIDECSDNNRPSKISKIEYPNPSYHDGEQEEEEEQ-KEGMNQHRRIQRYLV 59

Query: 237 AVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
           A+EYIGT F+GSQKQL  RTVVGVLEEAF KF+GQPVS+  SSRT
Sbjct: 60  AIEYIGTHFSGSQKQLTDRTVVGVLEEAFCKFVGQPVSVICSSRT 104


>gb|ESW20554.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 372

 Score =  124 bits (312), Expect(2) = 7e-53
 Identities = 58/72 (80%), Positives = 66/72 (91%)
 Frame = +2

Query: 395 DAGVHALSNVCHVDVERISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPA 574
           DAGVHALSNVCHVD++R SKRKPGEVL PHEP+VV RAVNHFLQ ++ D+TV+DVRCVP+
Sbjct: 103 DAGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQ-HDSDLTVIDVRCVPS 161

Query: 575 DFHARYKACERT 610
           DFHARYKA ERT
Sbjct: 162 DFHARYKALERT 173



 Score =  109 bits (272), Expect(2) = 7e-53
 Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
 Frame = +3

Query: 60  MTENVKHCLDTSVASLDRPSKIPKTQDLT-VDDEDGEELQESGVIAQLMSPNPR--LQRY 230
           MT ++KH +D   +  +RPSK+ K +  T +  ED EE +E       M+ NPR  +QRY
Sbjct: 1   MTHSLKHSVDLECSDNNRPSKLSKIEHSTHIAHEDDEEEEEKE-----MTQNPRNGIQRY 55

Query: 231 LIAVEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRT 371
            +A+EYIGTRF+GSQKQL CRTVVG LEEAF KF+G PVS+S SSRT
Sbjct: 56  FLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHPVSVSCSSRT 102