BLASTX nr result

ID: Jatropha_contig00035118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00035118
         (616 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526496.1| ring finger protein, putative [Ricinus commu...   102   6e-20
gb|ERP52999.1| hypothetical protein POPTR_0014s05240g [Populus t...    94   3e-17
gb|ERP64349.1| hypothetical protein POPTR_0002s14140g [Populus t...    92   8e-17
ref|XP_002327016.1| predicted protein [Populus trichocarpa]            72   2e-10

>ref|XP_002526496.1| ring finger protein, putative [Ricinus communis]
           gi|223534171|gb|EEF35887.1| ring finger protein,
           putative [Ricinus communis]
          Length = 484

 Score =  102 bits (255), Expect = 6e-20
 Identities = 71/175 (40%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
 Frame = +2

Query: 119 MGSSNSRLG------LKHRFFSSLFCGAAS-SYTPIEVGDRPDDSSTISLQNMAPHHDVS 277
           MGS NSRL       L+ R  S LFCGA+S S+ PI +GD PD+SST SL N+A   DVS
Sbjct: 1   MGSINSRLESTGRSRLRRRLLSYLFCGASSASHAPIVMGDHPDESSTASLHNLALSPDVS 60

Query: 278 ISSKQQST----FGSKADFXXXXXXXXXXXXXXXXXXXXXXXXXXNHSGNLELCSQQLNV 445
           ISS Q S+     G+++                            N SGN +L SQ  N 
Sbjct: 61  ISSNQLSSSAFDLGTRSS---SSTAETGASSGSIIEDASIRHSFSNQSGNYDLHSQHANA 117

Query: 446 NNSLIEPQVANTSLKFQPPTGSHSTDALHTSLVGQDTASLHSDEQTVADVSIDGF 610
            +S+ E  V    +K QPP  S ST ALHTS V Q+  +LH   +TV   S DG+
Sbjct: 118 IDSITEAHVTGAPIKDQPPADSLSTGALHTSFVDQEPGNLHLLGETVGQASADGY 172


>gb|ERP52999.1| hypothetical protein POPTR_0014s05240g [Populus trichocarpa]
          Length = 479

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 66/163 (40%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
 Frame = +2

Query: 122 GSSNSRLGLKHRFFSSLFCGAASSYTPIEVGDRPDDSSTISLQNMAPHHDVSISSKQQ-- 295
           GS  +R   K R  +SLFCG + S  PIE+GD  D+S T SL+N+A  HDVS SSKQ   
Sbjct: 16  GSGTNRF--KRRALASLFCGGSVSRAPIEMGDHVDESLTGSLENLATCHDVSASSKQASF 73

Query: 296 STFGSKADFXXXXXXXXXXXXXXXXXXXXXXXXXXNHSGNLELCSQQLNVNNSLIEPQVA 475
           S  GS+                               S N EL SQQ NVN+SL+E   A
Sbjct: 74  SNLGSETGLSSSSVESGDLSRSSNGKVEDSPA-----SKNSELQSQQSNVNDSLMEAHAA 128

Query: 476 NTSLKFQPPTGSHSTDALHTSLVGQDTASLHSDEQTVADVSID 604
           + S+K Q PT S S       +VG D+ +L S+E +V+D SID
Sbjct: 129 SASVKEQTPTASVSDVTTVAGVVGLDSENLDSNESSVSDASID 171


>gb|ERP64349.1| hypothetical protein POPTR_0002s14140g [Populus trichocarpa]
          Length = 522

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
 Frame = +2

Query: 119 MGSSNSRLG-----------LKHRFFSSLFCGAASSYTPIEVGDRPDDSSTISLQNMAPH 265
           MGSS+SRL             K R  +S+FCG ++S +PIE+GD  D+S   SL+N+A  
Sbjct: 48  MGSSSSRLNGSTPSGSGTNSFKRRALASVFCGGSASQSPIEMGDHMDESLAGSLENLATF 107

Query: 266 HDVSISSKQ--QSTFGSKADFXXXXXXXXXXXXXXXXXXXXXXXXXXNHSGNLELCSQQL 439
           HDVS SSKQ   S FG +                                 N E  SQQ+
Sbjct: 108 HDVSASSKQASSSNFGLETGLSSSSAESGDLSGSSNGNVEDTSAFK-----NSESQSQQV 162

Query: 440 NVNNSLIEPQVANTSLKFQPPTGSHSTDALHTSLVGQDTASLHSDEQTVADVSID 604
           N++ S +E    N S+K Q PT S S D     +VGQD+ +L S+ ++++D ++D
Sbjct: 163 NISGSTMEAHAVNASVKEQTPTASASDDTAVAGVVGQDSGNLDSNGESISDANMD 217


>ref|XP_002327016.1| predicted protein [Populus trichocarpa]
          Length = 437

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 52/134 (38%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
 Frame = +2

Query: 209 VGDRPDDSSTISLQNMAPHHDVSISSKQQS--TFGSKADFXXXXXXXXXXXXXXXXXXXX 382
           +GD  D+S T SL+N+A  HDVS SSKQ S    GS+                       
Sbjct: 1   MGDHVDESLTGSLENLATCHDVSASSKQASFSNLGSETGLSSSSVESGDLSRSSNGKVED 60

Query: 383 XXXXXXNHSGNLELCSQQLNVNNSLIEPQVANTSLKFQPPTGSHSTDALHTSLVGQDTAS 562
                   S N EL SQQ NVN+SL+E   A+ S+K Q PT S S       +VG D+ +
Sbjct: 61  SPA-----SKNSELQSQQSNVNDSLMEAHAASASVKEQTPTASVSDVTTVAGVVGLDSEN 115

Query: 563 LHSDEQTVADVSID 604
           L S+E +V+D SID
Sbjct: 116 LDSNESSVSDASID 129


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