BLASTX nr result

ID: Jatropha_contig00035105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00035105
         (501 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004512514.1| PREDICTED: nucleolar protein 12-like [Cicer ...    64   1e-08
ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|5...    64   3e-08
ref|XP_006352880.1| PREDICTED: nucleolar protein 12-like [Solanu...    62   7e-08
ref|XP_004245924.1| PREDICTED: nucleolar protein 12-like [Solanu...    60   4e-07
gb|EMJ11061.1| hypothetical protein PRUPE_ppa003774mg [Prunus pe...    59   6e-07
ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycin...    58   1e-06
gb|EOY25135.1| RNA-binding family protein, putative [Theobroma c...    58   1e-06
ref|XP_003612864.1| RNA-binding protein [Medicago truncatula] gi...    57   2e-06
gb|ESW30281.1| hypothetical protein PHAVU_002G139900g [Phaseolus...    56   4e-06
ref|XP_002303427.1| predicted protein [Populus trichocarpa]            55   9e-06

>ref|XP_004512514.1| PREDICTED: nucleolar protein 12-like [Cicer arietinum]
          Length = 525

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
 Frame = +2

Query: 44  KRKELDASSVPQNDNVPSGSDIFKTLFGNVEQ--NSVVSSIFSDNNPFKRKLQDSSLGLG 217
           K+K+ +    PQND V   S IF TLFGN  +      +S+FSD+NPFKRK   S+    
Sbjct: 3   KKKQKEPQQTPQNDTVSPPSSIFNTLFGNASEQITPTAASLFSDDNPFKRKPAKSTSVSD 62

Query: 218 NANSSENPEINKSNIDEGKRKRNKGK 295
             + + NPE   + +DE KRKR K K
Sbjct: 63  VTDKTLNPE--NAVVDEKKRKRKKEK 86


>ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|550346295|gb|ERP64951.1|
           RNA recognition motif-containing family protein [Populus
           trichocarpa]
          Length = 487

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/101 (38%), Positives = 52/101 (51%)
 Frame = +2

Query: 35  MGKKRKELDASSVPQNDNVPSGSDIFKTLFGNVEQNSVVSSIFSDNNPFKRKLQDSSLGL 214
           MGKK+ +   +S  QN    + SD+F+TLF   +Q +  SS+FSD+NPFKRK +D     
Sbjct: 1   MGKKKHKEPDTSTAQNHTASALSDVFQTLFSGADQTASTSSLFSDSNPFKRKPEDPK--- 57

Query: 215 GNANSSENPEINKSNIDEGKRKRNKGKKFDLXXXXXATENP 337
            N N S + +  K N  E   K  K K          TENP
Sbjct: 58  SNENPSTDVDTQKPNFYETTEKLKKVK----------TENP 88


>ref|XP_006352880.1| PREDICTED: nucleolar protein 12-like [Solanum tuberosum]
          Length = 565

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
 Frame = +2

Query: 35  MGKKRKELDASSVPQNDNVPSGSDIFKTLFGNVEQNSVVSSIFSDNNPFKRK-------L 193
           M KK K+      P N+   S SDIF TLFG    +S ++S+FSD NPFKRK        
Sbjct: 1   MAKKSKDKQKQQQPNNETSNS-SDIFNTLFGATPADSNIASLFSDENPFKRKPNDNPTAT 59

Query: 194 QDSSLGLGNANSSENPEINKSNIDEG----KRKRNKGKKFDLXXXXXATENPLXXXXXXX 361
           Q+  LG+   +     +    N D G    K+++ K KK +L     A E          
Sbjct: 60  QEPKLGVVEVSIENQTDGVTGNNDSGTAEPKKRKKKDKKVNLDSGSVAEEGN-EEEGEKS 118

Query: 362 XXXXXPEFEESPNIVSDLDKSKKNPSLLV 448
                   EES  +VSD  + KK+  +++
Sbjct: 119 KRVALSGVEESNGVVSDSGRKKKDKKVIL 147


>ref|XP_004245924.1| PREDICTED: nucleolar protein 12-like [Solanum lycopersicum]
          Length = 565

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
 Frame = +2

Query: 35  MGKKRKELDASSVPQNDNVPSGSDIFKTLFGNVEQNSVVSSIFSDNNPFKRKLQDS---- 202
           M KK K+      P N+   S SDIF TLFG    +S ++S+FSD NPFKRK  D+    
Sbjct: 1   MAKKSKDKKKQQQPYNETSNS-SDIFNTLFGATPADSNIASLFSDENPFKRKPNDNPTAT 59

Query: 203 ---SLGLGNANSSENPEINKSNIDEG----KRKRNKGKKFDLXXXXXATENPLXXXXXXX 361
               LG+   +     +    N D G    K+++ K KK +L     A E          
Sbjct: 60  EEPKLGVVEVSIENQTDGVSGNNDSGSAELKKRKKKDKKVNLDSGSVA-EEVNEEEGGKS 118

Query: 362 XXXXXPEFEESPNIVSDLDKSKKNPSLLV 448
                   EES  +VSD  + KK  ++++
Sbjct: 119 KRVALSGVEESNGVVSDSGRKKKAKNVIL 147


>gb|EMJ11061.1| hypothetical protein PRUPE_ppa003774mg [Prunus persica]
          Length = 550

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
 Frame = +2

Query: 35  MGKKRKELDASSVPQNDNVPSGSDIFKTLFGNVEQNSVVSSIFSDNNPFKRKLQDSSLGL 214
           MG+K+ +      P++  V +  DIFKTLFG+   +  V SIFS++NPF+R  Q+  LG 
Sbjct: 1   MGRKKPK-----EPESVAVSAQPDIFKTLFGDATSDDAVPSIFSESNPFRRTNQEPGLGF 55

Query: 215 ----GNANSSENPEINKSNIDEG---KRKRNKGKKFDLXXXXXATENPLXXXXXXXXXXX 373
                 A  + N   ++++ D+G   KRKR K KK        A+E PL           
Sbjct: 56  VAPSVEAAENVNHGDSENSGDDGEVKKRKRRKEKKAPGLVNEEASETPLEGKKVKKKKLQ 115

Query: 374 XPEFEESPNIVSDLDKSKK 430
                E+PN+  +L+   K
Sbjct: 116 ETPNLENPNLGYELNGVSK 134


>ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 519

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
 Frame = +2

Query: 44  KRKELDASSVPQNDNVPSGSDIFKTLFGNVEQNSVVS---SIFSDNNPFKRK---LQDSS 205
           KRK+ D     Q D V + S IF  LF    + +  +   S+FSD+NPF+RK   L DS+
Sbjct: 3   KRKQKDLQQSSQTDTVSTPSSIFSKLFAIAPERTTATTAASLFSDDNPFRRKPTPLSDST 62

Query: 206 LGLGNANSSENPEINKSNIDEGKRKRNKGK 295
               N N  ++P +N  + +E KRKRNK K
Sbjct: 63  NRTQNPNDGDHP-VNTDSGEEKKRKRNKEK 91


>gb|EOY25135.1| RNA-binding family protein, putative [Theobroma cacao]
          Length = 533

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
 Frame = +2

Query: 35  MGKKRKELDASSVPQNDNVPSGSDIFKTLFGNV-EQNSVVSSIFSDNNPFKRKLQDSSLG 211
           MGKK+ + +  +   +  V + SDIFKT+FG+V EQN+   S+FSD NPFKRK Q+    
Sbjct: 1   MGKKKSQ-EPETTGWDGTVTAQSDIFKTIFGDVSEQNAAFFSLFSDGNPFKRKPQE---- 55

Query: 212 LGNANSSENPE----INKSNIDEGKRKRNKGKK 298
                S+ENP+    ++   ++  +RKR + +K
Sbjct: 56  -----SAENPDRVGLLDSDTVELKQRKRKEKEK 83


>ref|XP_003612864.1| RNA-binding protein [Medicago truncatula]
           gi|355514199|gb|AES95822.1| RNA-binding protein
           [Medicago truncatula]
          Length = 518

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
 Frame = +2

Query: 44  KRKELDASSVPQNDNVPSGSDIFKTLFGNVEQNSVVS----SIFSDNNPFKRKLQDSSLG 211
           K+K+ +    PQND V + S IF TLF N  + +  +    S+FSD+NP+KRK       
Sbjct: 3   KKKQNEPQQTPQNDTVSAPSSIFNTLFANAPEQTTAAADTVSLFSDDNPYKRK------- 55

Query: 212 LGNANSSENPEINKSNIDEGKRKRNKGK 295
               N + +PE     +DE KRK+NK K
Sbjct: 56  ---PNQTLSPE--NGVVDEKKRKKNKEK 78


>gb|ESW30281.1| hypothetical protein PHAVU_002G139900g [Phaseolus vulgaris]
          Length = 524

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
 Frame = +2

Query: 35  MGKKRKELDASSVPQNDNVPSGSDIFKTLFGNV-EQNSVVSSIFSDNNPFKRKLQDSSLG 211
           MGKK+ +       Q D V S S IF  LFGN  EQ +  +++FSD+NPF+RK    S  
Sbjct: 1   MGKKKPK----DPQQADTVSSPSSIFDKLFGNAPEQGTATAALFSDDNPFRRKPASLSDT 56

Query: 212 LGNANSSENPEI-NKSNIDEGKRKRNK 289
           + NA    N +  N+   DE KRKRN+
Sbjct: 57  VNNAQIPYNGDAENRDAGDEKKRKRNR 83


>ref|XP_002303427.1| predicted protein [Populus trichocarpa]
          Length = 491

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 31/87 (35%), Positives = 44/87 (50%)
 Frame = +2

Query: 35  MGKKRKELDASSVPQNDNVPSGSDIFKTLFGNVEQNSVVSSIFSDNNPFKRKLQDSSLGL 214
           MG++  +   ++  Q + V + SDIFK LF    Q +   S+F+D+NPFKRK  D     
Sbjct: 1   MGRREHQEPETATTQKNIVSASSDIFKFLFSGANQTAATFSLFTDSNPFKRKPDDPK--- 57

Query: 215 GNANSSENPEINKSNIDEGKRKRNKGK 295
            N N S N +I   N +    K  K K
Sbjct: 58  SNENPSANADIQDPNFNGTAMKLKKVK 84


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