BLASTX nr result

ID: Jatropha_contig00035027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00035027
         (588 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526496.1| ring finger protein, putative [Ricinus commu...   125   1e-26
gb|ERP52999.1| hypothetical protein POPTR_0014s05240g [Populus t...    96   5e-18
gb|ERP64349.1| hypothetical protein POPTR_0002s14140g [Populus t...    93   4e-17
ref|XP_002327016.1| predicted protein [Populus trichocarpa]            74   3e-11

>ref|XP_002526496.1| ring finger protein, putative [Ricinus communis]
           gi|223534171|gb|EEF35887.1| ring finger protein,
           putative [Ricinus communis]
          Length = 484

 Score =  125 bits (313), Expect = 1e-26
 Identities = 86/200 (43%), Positives = 105/200 (52%), Gaps = 11/200 (5%)
 Frame = +3

Query: 21  MGSSNSRLG------LKHRFFSSLFCGAAS-SYTPIEVGDRPDDSSTISLQNMAPHHDVS 179
           MGS NSRL       L+ R  S LFCGA+S S+ PI +GD PD+SST SL N+A   DVS
Sbjct: 1   MGSINSRLESTGRSRLRRRLLSYLFCGASSASHAPIVMGDHPDESSTASLHNLALSPDVS 60

Query: 180 ISSKQQST----FGSKADFXXXXXXXXXXXXXXXXXXXXXXXXXXNHSGNLELCSQQLNV 347
           ISS Q S+     G+++                            N SGN +L SQ  N 
Sbjct: 61  ISSNQLSSSAFDLGTRSS---SSTAETGASSGSIIEDASIRHSFSNQSGNYDLHSQHANA 117

Query: 348 NNSLIEPQVANTSLKFQPPTGSHSTDALHTSLVGQDTASLHSDEQTVADVSIDGFTPDSG 527
            +S+ E  V    +K QPP  S ST ALHTS V Q+  +LH   +TV   S DG+  D G
Sbjct: 118 IDSITEAHVTGAPIKDQPPADSLSTGALHTSFVDQEPGNLHLLGETVGQASADGYIDDPG 177

Query: 528 SDVSGSLETSQQLPRFHLSV 587
           S+VS SL  SQ L RF LSV
Sbjct: 178 SNVSDSLIASQSLTRFLLSV 197


>gb|ERP52999.1| hypothetical protein POPTR_0014s05240g [Populus trichocarpa]
          Length = 479

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 72/186 (38%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
 Frame = +3

Query: 24  GSSNSRLGLKHRFFSSLFCGAASSYTPIEVGDRPDDSSTISLQNMAPHHDVSISSKQQ-- 197
           GS  +R   K R  +SLFCG + S  PIE+GD  D+S T SL+N+A  HDVS SSKQ   
Sbjct: 16  GSGTNRF--KRRALASLFCGGSVSRAPIEMGDHVDESLTGSLENLATCHDVSASSKQASF 73

Query: 198 STFGSKADFXXXXXXXXXXXXXXXXXXXXXXXXXXNHSGNLELCSQQLNVNNSLIEPQVA 377
           S  GS+                               S N EL SQQ NVN+SL+E   A
Sbjct: 74  SNLGSETGLSSSSVESGDLSRSSNGKVEDSPA-----SKNSELQSQQSNVNDSLMEAHAA 128

Query: 378 NTSLKFQPPTGSHSTDALHTSLVGQDTASLHSDEQTVADVSIDGFTPDSGSDVSGSLETS 557
           + S+K Q PT S S       +VG D+ +L S+E +V+D SID    ++ S +  SL   
Sbjct: 129 SASVKEQTPTASVSDVTTVAGVVGLDSENLDSNESSVSDASID--FSNTNSVIPASLVPP 186

Query: 558 QQLPRF 575
           Q L  F
Sbjct: 187 QPLSEF 192


>gb|ERP64349.1| hypothetical protein POPTR_0002s14140g [Populus trichocarpa]
          Length = 522

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
 Frame = +3

Query: 21  MGSSNSRLG-----------LKHRFFSSLFCGAASSYTPIEVGDRPDDSSTISLQNMAPH 167
           MGSS+SRL             K R  +S+FCG ++S +PIE+GD  D+S   SL+N+A  
Sbjct: 48  MGSSSSRLNGSTPSGSGTNSFKRRALASVFCGGSASQSPIEMGDHMDESLAGSLENLATF 107

Query: 168 HDVSISSKQ--QSTFGSKADFXXXXXXXXXXXXXXXXXXXXXXXXXXNHSGNLELCSQQL 341
           HDVS SSKQ   S FG +                                 N E  SQQ+
Sbjct: 108 HDVSASSKQASSSNFGLETGLSSSSAESGDLSGSSNGNVEDTSAFK-----NSESQSQQV 162

Query: 342 NVNNSLIEPQVANTSLKFQPPTGSHSTDALHTSLVGQDTASLHSDEQTVADVSIDGFTPD 521
           N++ S +E    N S+K Q PT S S D     +VGQD+ +L S+ ++++D ++D    +
Sbjct: 163 NISGSTMEAHAVNASVKEQTPTASASDDTAVAGVVGQDSGNLDSNGESISDANMD--LSN 220

Query: 522 SGSDVSGSLETSQQLPRF 575
           + S +  SL + Q  P F
Sbjct: 221 TNSVIPASL-SPQPCPEF 237


>ref|XP_002327016.1| predicted protein [Populus trichocarpa]
          Length = 437

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 58/157 (36%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
 Frame = +3

Query: 111 VGDRPDDSSTISLQNMAPHHDVSISSKQQS--TFGSKADFXXXXXXXXXXXXXXXXXXXX 284
           +GD  D+S T SL+N+A  HDVS SSKQ S    GS+                       
Sbjct: 1   MGDHVDESLTGSLENLATCHDVSASSKQASFSNLGSETGLSSSSVESGDLSRSSNGKVED 60

Query: 285 XXXXXXNHSGNLELCSQQLNVNNSLIEPQVANTSLKFQPPTGSHSTDALHTSLVGQDTAS 464
                   S N EL SQQ NVN+SL+E   A+ S+K Q PT S S       +VG D+ +
Sbjct: 61  SPA-----SKNSELQSQQSNVNDSLMEAHAASASVKEQTPTASVSDVTTVAGVVGLDSEN 115

Query: 465 LHSDEQTVADVSIDGFTPDSGSDVSGSLETSQQLPRF 575
           L S+E +V+D SID    ++ S +  SL   Q L  F
Sbjct: 116 LDSNESSVSDASID--FSNTNSVIPASLVPPQPLSEF 150


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