BLASTX nr result
ID: Jatropha_contig00033556
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00033556
(610 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB61213.1| glycine-rich protein [Oryza sativa Japonica Group] 127 2e-27
dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza] 110 4e-22
ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [... 99 1e-18
emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis] 99 1e-18
ref|XP_006339763.1| PREDICTED: glycine-rich RNA-binding protein ... 96 6e-18
gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus... 96 1e-17
gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x... 95 2e-17
gb|ERP62303.1| hypothetical protein POPTR_0004s16260g [Populus t... 94 2e-17
ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299... 94 2e-17
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu] 94 2e-17
ref|XP_002305429.1| predicted protein [Populus trichocarpa] gi|1... 94 2e-17
ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299... 94 4e-17
gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao] 93 5e-17
emb|CBI32594.3| unnamed protein product [Vitis vinifera] 93 5e-17
gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsu... 93 5e-17
ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein ... 93 5e-17
ref|XP_004507451.1| PREDICTED: glycine-rich RNA-binding, abscisi... 93 6e-17
gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula] 93 6e-17
dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana s... 92 8e-17
ref|XP_002313795.1| predicted protein [Populus trichocarpa] 92 1e-16
>gb|AAB61213.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 197
Score = 127 bits (320), Expect = 2e-27
Identities = 82/167 (49%), Positives = 94/167 (56%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKVRLSWSQR*DLTRPDSALSIPNL*FVC 180
+EYRCFVGGLAWAT D++L AFS YG+ILESKVR W IP+
Sbjct: 6 VEYRCFVGGLAWATDDRSLEAAFSTYGEILESKVR--W--------------IPS----- 44
Query: 181 VTISLCYCSFMLLISNRYVHLHPLGEDRSIFLFYFFSLVIYCGSVLFVYGSNEICCFRVQ 360
SLC+ FL F V YG + VQ
Sbjct: 45 ---SLCF-----------------------FLMRFGGGVRQIWLRKSDYGGG----YAVQ 74
Query: 361 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
IINDRETGRSRGFGFVTF+NE++MRDAI+GMNG+ LDGRNITVNEAQ
Sbjct: 75 IINDRETGRSRGFGFVTFSNEQAMRDAIQGMNGKELDGRNITVNEAQ 121
>dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza]
Length = 163
Score = 110 bits (274), Expect = 4e-22
Identities = 67/129 (51%), Positives = 74/129 (57%)
Frame = +1
Query: 115 SQR*DLTRPDSALSIPNL*FVCVTISLCYCSFMLLISNRYVHLHPLGEDRSIFLFYFFSL 294
S R DLTRP+SALSI +L VCVTI +C + + ++N
Sbjct: 2 SHRSDLTRPESALSIQDLRSVCVTI-ICVTTVLFYVTNLQ-------------------- 40
Query: 295 VIYCGSVLFVYGSNEICCFRVQIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDG 474
IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDG
Sbjct: 41 ---------------------SIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDG 79
Query: 475 RNITVNEAQ 501
RNITVNEAQ
Sbjct: 80 RNITVNEAQ 88
>ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 166
Score = 98.6 bits (244), Expect = 1e-18
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 38 KIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
Score = 65.5 bits (158), Expect = 1e-08
Identities = 28/34 (82%), Positives = 33/34 (97%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
IEYRCFVGGLAWAT+D+AL EAFSAYG++LESK+
Sbjct: 6 IEYRCFVGGLAWATSDKALEEAFSAYGEVLESKI 39
>emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 98.6 bits (244), Expect = 1e-18
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 38 KIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
Score = 65.5 bits (158), Expect = 1e-08
Identities = 28/34 (82%), Positives = 33/34 (97%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
IEYRCFVGGLAWAT+D+AL EAFSAYG++LESK+
Sbjct: 6 IEYRCFVGGLAWATSDKALEEAFSAYGEVLESKI 39
>ref|XP_006339763.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like, partial
[Solanum tuberosum]
Length = 182
Score = 96.3 bits (238), Expect = 6e-18
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 286 FSLVIYCGSVLFVYGSNEICCFRVQIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQN 465
F + CGS CF QIINDRETGRSRGFGFVTF +EKSMR+AIE MNGQN
Sbjct: 3 FKKICNCGSFYLPI------CFFFQIINDRETGRSRGFGFVTFTDEKSMRNAIEAMNGQN 56
Query: 466 LDGRNITVNEAQ 501
LDGRNITVNEAQ
Sbjct: 57 LDGRNITVNEAQ 68
>gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 95.5 bits (236), Expect = 1e-17
Identities = 45/48 (93%), Positives = 48/48 (100%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 38 KIINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQNLDGRNITVNEAQ 85
>gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding
protein 2 [Pelargonium x hortorum]
Length = 166
Score = 94.7 bits (234), Expect = 2e-17
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTF+NEKSM DAIEGMNGQNLDGRNITVNEAQ
Sbjct: 38 KIINDRETGRSRGFGFVTFSNEKSMNDAIEGMNGQNLDGRNITVNEAQ 85
Score = 59.7 bits (143), Expect = 6e-07
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
+EYRCFVGGLAWAT D AL +AFS YG+++ESK+
Sbjct: 6 VEYRCFVGGLAWATDDHALEQAFSQYGEVVESKI 39
>gb|ERP62303.1| hypothetical protein POPTR_0004s16260g [Populus trichocarpa]
Length = 158
Score = 94.4 bits (233), Expect = 2e-17
Identities = 44/48 (91%), Positives = 48/48 (100%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTFNNEK+MRDAI+GMNGQ+LDGRNITVNEAQ
Sbjct: 37 KIINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQ 84
Score = 63.5 bits (153), Expect = 4e-08
Identities = 26/34 (76%), Positives = 32/34 (94%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
+EYRCFVGGLAWATTDQ+L EAFS YG+I++SK+
Sbjct: 5 VEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKI 38
>ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299909 isoform 2 [Fragaria
vesca subsp. vesca]
Length = 161
Score = 94.4 bits (233), Expect = 2e-17
Identities = 46/56 (82%), Positives = 51/56 (91%), Gaps = 3/56 (5%)
Frame = +1
Query: 343 CCFRV---QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
C F + +IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQ+LDGRNITVNEAQ
Sbjct: 14 CVFAISQNRIINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQDLDGRNITVNEAQ 69
>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 94.4 bits (233), Expect = 2e-17
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTF +EKSMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 38 KIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
Score = 68.6 bits (166), Expect = 1e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
+E+RCFVGGLAWATTD +LHEAFSAYGDILESK+
Sbjct: 6 VEFRCFVGGLAWATTDSSLHEAFSAYGDILESKI 39
>ref|XP_002305429.1| predicted protein [Populus trichocarpa] gi|118481826|gb|ABK92850.1|
unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| glycine-rich RNA-binding
family protein [Populus trichocarpa]
Length = 165
Score = 94.4 bits (233), Expect = 2e-17
Identities = 44/48 (91%), Positives = 48/48 (100%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTFNNEK+MRDAI+GMNGQ+LDGRNITVNEAQ
Sbjct: 37 KIINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQ 84
Score = 63.5 bits (153), Expect = 4e-08
Identities = 26/34 (76%), Positives = 32/34 (94%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
+EYRCFVGGLAWATTDQ+L EAFS YG+I++SK+
Sbjct: 5 VEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKI 38
>ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299909 isoform 1 [Fragaria
vesca subsp. vesca]
Length = 177
Score = 93.6 bits (231), Expect = 4e-17
Identities = 44/48 (91%), Positives = 48/48 (100%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQ+LDGRNITVNEAQ
Sbjct: 38 KIINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQDLDGRNITVNEAQ 85
>gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao]
Length = 168
Score = 93.2 bits (230), Expect = 5e-17
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTF +EK+MRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 38 KIINDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQ 85
Score = 59.3 bits (142), Expect = 8e-07
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
IE+RCFVGGLAWAT D+AL +AFS YG+I+ESK+
Sbjct: 6 IEFRCFVGGLAWATDDRALEQAFSQYGEIVESKI 39
>emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 93.2 bits (230), Expect = 5e-17
Identities = 44/48 (91%), Positives = 48/48 (100%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTF++E+SMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQ 85
Score = 60.1 bits (144), Expect = 4e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
IEYRCFVGGLAWAT DQ+L AFS +G+ILESK+
Sbjct: 6 IEYRCFVGGLAWATDDQSLERAFSQFGEILESKI 39
>gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 93.2 bits (230), Expect = 5e-17
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTF +EK+MRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 38 KIINDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQ 85
Score = 60.5 bits (145), Expect = 3e-07
Identities = 25/34 (73%), Positives = 32/34 (94%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
+E+RCFVGGLAWAT D+AL EAFSA+G+I+ESK+
Sbjct: 6 VEFRCFVGGLAWATDDRALEEAFSAFGEIVESKI 39
>ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 93.2 bits (230), Expect = 5e-17
Identities = 44/48 (91%), Positives = 48/48 (100%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTF++E+SMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQ 85
Score = 60.1 bits (144), Expect = 4e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
IEYRCFVGGLAWAT DQ+L AFS +G+ILESK+
Sbjct: 6 IEYRCFVGGLAWATDDQSLERAFSQFGEILESKI 39
>ref|XP_004507451.1| PREDICTED: glycine-rich RNA-binding, abscisic acid-inducible
protein-like [Cicer arietinum]
Length = 155
Score = 92.8 bits (229), Expect = 6e-17
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTF NEKSMRDAIEGMNGQ++DGRNITVNEAQ
Sbjct: 38 KIINDRETGRSRGFGFVTFANEKSMRDAIEGMNGQDMDGRNITVNEAQ 85
Score = 56.2 bits (134), Expect = 6e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
+EYRCFVGGLAWAT AL +AFS YG+I++SK+
Sbjct: 6 VEYRCFVGGLAWATDSDALEKAFSQYGEIVDSKI 39
>gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 92.8 bits (229), Expect = 6e-17
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTFNNEKSMRDAI+GMN Q LDGRNITVNEAQ
Sbjct: 37 KIINDRETGRSRGFGFVTFNNEKSMRDAIQGMNSQELDGRNITVNEAQ 84
Score = 64.7 bits (156), Expect = 2e-08
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
IEYRCFVGGLAWATTDQ+L EAFS YG+IL+SK+
Sbjct: 5 IEYRCFVGGLAWATTDQSLQEAFSPYGEILDSKI 38
>dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 92.4 bits (228), Expect = 8e-17
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTF +EKSMRDAIEGMNGQ+LDGRNITVNEAQ
Sbjct: 36 KIINDRETGRSRGFGFVTFGDEKSMRDAIEGMNGQDLDGRNITVNEAQ 83
Score = 62.4 bits (150), Expect = 9e-08
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
+EYRCFVGGLAWATTD+ L EAFS YG++LESK+
Sbjct: 4 VEYRCFVGGLAWATTDRTLGEAFSQYGEVLESKI 37
>ref|XP_002313795.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 92.0 bits (227), Expect = 1e-16
Identities = 43/48 (89%), Positives = 47/48 (97%)
Frame = +1
Query: 358 QIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 501
+IINDRETGRSRGFGFVTF NEK+MRDAI+GMNGQ+LDGRNITVNEAQ
Sbjct: 36 KIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNEAQ 83
Score = 63.2 bits (152), Expect = 5e-08
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +1
Query: 1 IEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 102
+EYRCFVGGLAWATTDQ L EAFS YG+I++SK+
Sbjct: 4 VEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKI 37