BLASTX nr result

ID: Jatropha_contig00033349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00033349
         (593 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza]           115   1e-23
ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [...    98   1e-18
emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]    98   1e-18
ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299...    97   4e-18
ref|XP_006339763.1| PREDICTED: glycine-rich RNA-binding protein ...    95   1e-17
gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus...    95   1e-17
gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x...    94   2e-17
gb|ERP62303.1| hypothetical protein POPTR_0004s16260g [Populus t...    94   3e-17
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]       94   3e-17
ref|XP_002305429.1| predicted protein [Populus trichocarpa] gi|1...    94   3e-17
ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299...    93   4e-17
gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao]    93   6e-17
emb|CBI32594.3| unnamed protein product [Vitis vinifera]               93   6e-17
gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsu...    93   6e-17
ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein ...    93   6e-17
ref|XP_004507451.1| PREDICTED: glycine-rich RNA-binding, abscisi...    92   7e-17
gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]      92   7e-17
dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana s...    92   1e-16
ref|XP_006349603.1| PREDICTED: glycine-rich RNA-binding protein ...    92   1e-16
ref|XP_002313795.1| predicted protein [Populus trichocarpa]            92   1e-16

>dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza]
          Length = 163

 Score =  115 bits (287), Expect = 1e-23
 Identities = 55/67 (82%), Positives = 59/67 (88%)
 Frame = +2

Query: 71  ICLCYYISVLLFFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN 250
           +C+       + FYVTNL+SIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN
Sbjct: 22  VCVTIICVTTVLFYVTNLQSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN 81

Query: 251 ITVNEAQ 271
           ITVNEAQ
Sbjct: 82  ITVNEAQ 88


>ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 166

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39  IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 85


>emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
          Length = 165

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39  IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 85


>ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299909 isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 161

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 47/67 (70%), Positives = 56/67 (83%)
 Frame = +2

Query: 71  ICLCYYISVLLFFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN 250
           + +C+Y S +   +  +   IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQ+LDGRN
Sbjct: 6   VTICHYDSCV---FAISQNRIINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQDLDGRN 62

Query: 251 ITVNEAQ 271
           ITVNEAQ
Sbjct: 63  ITVNEAQ 69


>ref|XP_006339763.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like, partial
           [Solanum tuberosum]
          Length = 182

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 49/69 (71%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
 Frame = +2

Query: 71  ICLC--YYISVLLFFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDG 244
           IC C  +Y+ +  FF       IINDRETGRSRGFGFVTF +EKSMR+AIE MNGQNLDG
Sbjct: 6   ICNCGSFYLPICFFF------QIINDRETGRSRGFGFVTFTDEKSMRNAIEAMNGQNLDG 59

Query: 245 RNITVNEAQ 271
           RNITVNEAQ
Sbjct: 60  RNITVNEAQ 68


>gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
          Length = 178

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39  IINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQNLDGRNITVNEAQ 85


>gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
           gi|2267569|gb|AAB63582.1| glycine-rich RNA binding
           protein 2 [Pelargonium x hortorum]
          Length = 166

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 45/47 (95%), Positives = 46/47 (97%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTF+NEKSM DAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39  IINDRETGRSRGFGFVTFSNEKSMNDAIEGMNGQNLDGRNITVNEAQ 85


>gb|ERP62303.1| hypothetical protein POPTR_0004s16260g [Populus trichocarpa]
          Length = 158

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTFNNEK+MRDAI+GMNGQ+LDGRNITVNEAQ
Sbjct: 38  IINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQ 84


>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
          Length = 167

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 45/47 (95%), Positives = 46/47 (97%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTF +EKSMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39  IINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 85


>ref|XP_002305429.1| predicted protein [Populus trichocarpa] gi|118481826|gb|ABK92850.1|
           unknown [Populus trichocarpa]
           gi|222848393|gb|EEE85940.1| glycine-rich RNA-binding
           family protein [Populus trichocarpa]
          Length = 165

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTFNNEK+MRDAI+GMNGQ+LDGRNITVNEAQ
Sbjct: 38  IINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQ 84


>ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299909 isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 177

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQ+LDGRNITVNEAQ
Sbjct: 39  IINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQDLDGRNITVNEAQ 85


>gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao]
          Length = 168

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTF +EK+MRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39  IINDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQ 85


>emb|CBI32594.3| unnamed protein product [Vitis vinifera]
          Length = 121

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTF++E+SMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39  IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQ 85


>gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
          Length = 168

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTF +EK+MRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39  IINDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQ 85


>ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
           vinifera]
          Length = 162

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTF++E+SMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39  IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQ 85


>ref|XP_004507451.1| PREDICTED: glycine-rich RNA-binding, abscisic acid-inducible
           protein-like [Cicer arietinum]
          Length = 155

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTF NEKSMRDAIEGMNGQ++DGRNITVNEAQ
Sbjct: 39  IINDRETGRSRGFGFVTFANEKSMRDAIEGMNGQDMDGRNITVNEAQ 85


>gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
          Length = 164

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 44/47 (93%), Positives = 45/47 (95%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTFNNEKSMRDAI+GMN Q LDGRNITVNEAQ
Sbjct: 38  IINDRETGRSRGFGFVTFNNEKSMRDAIQGMNSQELDGRNITVNEAQ 84


>dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
          Length = 165

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTF +EKSMRDAIEGMNGQ+LDGRNITVNEAQ
Sbjct: 37  IINDRETGRSRGFGFVTFGDEKSMRDAIEGMNGQDLDGRNITVNEAQ 83


>ref|XP_006349603.1| PREDICTED: glycine-rich RNA-binding protein 1-like isoform X2
           [Solanum tuberosum]
          Length = 146

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 48/64 (75%), Positives = 53/64 (82%), Gaps = 5/64 (7%)
 Frame = +2

Query: 95  VLLFFYVTN-----LKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITV 259
           +LL  +VT      L +IINDRETGRSRGFGFVTF +EKSMR+AIE MNGQNLDGRNITV
Sbjct: 1   MLLLLFVTLTLIPFLYTIINDRETGRSRGFGFVTFTDEKSMRNAIEAMNGQNLDGRNITV 60

Query: 260 NEAQ 271
           NEAQ
Sbjct: 61  NEAQ 64


>ref|XP_002313795.1| predicted protein [Populus trichocarpa]
          Length = 128

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = +2

Query: 131 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 271
           IINDRETGRSRGFGFVTF NEK+MRDAI+GMNGQ+LDGRNITVNEAQ
Sbjct: 37  IINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNEAQ 83


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