BLASTX nr result
ID: Jatropha_contig00032997
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00032997
(594 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,... 93 1e-20
gb|EMJ07903.1| hypothetical protein PRUPE_ppa023974mg [Prunus pe... 91 2e-16
ref|XP_004149380.1| PREDICTED: pentatricopeptide repeat-containi... 89 6e-16
gb|EOY10001.1| Pentatricopeptide repeat (PPR) superfamily protei... 87 2e-15
ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
gb|ERP50737.1| hypothetical protein POPTR_0017s06420g [Populus t... 86 7e-15
ref|XP_002327945.1| predicted protein [Populus trichocarpa] 86 9e-15
gb|ESR41751.1| hypothetical protein CICLE_v100138541mg, partial ... 84 2e-14
gb|EEE90276.2| pentatricopeptide repeat-containing family protei... 84 3e-14
ref|XP_002309826.1| predicted protein [Populus trichocarpa] 84 3e-14
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi... 83 5e-14
emb|CBI26570.3| unnamed protein product [Vitis vinifera] 83 5e-14
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera] 83 5e-14
ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containi... 83 6e-14
ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containi... 83 6e-14
ref|XP_004511471.1| PREDICTED: pentatricopeptide repeat-containi... 79 9e-13
ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ... 78 1e-12
ref|NP_188439.2| pentatricopeptide repeat-containing protein [Ar... 77 2e-12
ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata] g... 77 2e-12
gb|ACJ11249.1| chloroplast embryo-defective 1270 [Arabidopsis th... 77 2e-12
>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1429
Score = 92.8 bits (229), Expect(2) = 1e-20
Identities = 48/70 (68%), Positives = 51/70 (72%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGRXXXXXXXX 180
LI+GCFIRRGL PAFKEI EKLGFVRPKKFAKLALLSDD R+K I ADIEGR
Sbjct: 1331 LIEGCFIRRGLVPAFKEINEKLGFVRPKKFAKLALLSDDKRQKAIHADIEGRKEKLEKLK 1390
Query: 181 XXVGLRGKTR 210
V L K +
Sbjct: 1391 SKVDLERKNK 1400
Score = 33.1 bits (74), Expect(2) = 1e-20
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3
Query: 198 RKNKV*QLRKRKSIQQVMLSKPEESKLD 281
RKNK +LR+R+ I++ MLSK +E KLD
Sbjct: 1397 RKNKTNKLRRRRFIRKDMLSKSQEIKLD 1424
>gb|EMJ07903.1| hypothetical protein PRUPE_ppa023974mg [Prunus persica]
Length = 1353
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/52 (82%), Positives = 49/52 (94%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGR 156
LIDGCF+RRGL PAFKEITE+LG VRPKKFA+LALLSD+ REKVI++DIEGR
Sbjct: 1255 LIDGCFLRRGLVPAFKEITERLGLVRPKKFARLALLSDEKREKVIQSDIEGR 1306
>ref|XP_004149380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Cucumis sativus]
gi|449526972|ref|XP_004170487.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Cucumis sativus]
Length = 212
Score = 89.4 bits (220), Expect = 6e-16
Identities = 41/52 (78%), Positives = 49/52 (94%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGR 156
+IDGCFIRRGL PAFK+ITE+LGFVRPKKF++LALL D+ R+KVIKAD+EGR
Sbjct: 124 VIDGCFIRRGLVPAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGR 175
>gb|EOY10001.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
Length = 1458
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGRXXXXXXXX 180
L++GCF+RRGL PAFK+ITE+LG VRPKKFA+LALLSDD REK I+ADI+G
Sbjct: 1375 LVEGCFMRRGLVPAFKDITERLGLVRPKKFARLALLSDDRREKAIQADIQGGKEKLEKLK 1434
Query: 181 XXVGLRG 201
VG +G
Sbjct: 1435 TKVGYKG 1441
>ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1496
Score = 87.0 bits (214), Expect = 3e-15
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGR 156
LIDGCF+RRGL PAFKEI EKL VRPKKFA+LALLSD+ RE+VI+ADIEGR
Sbjct: 1396 LIDGCFLRRGLVPAFKEINEKLELVRPKKFARLALLSDEKRERVIQADIEGR 1447
>gb|ERP50737.1| hypothetical protein POPTR_0017s06420g [Populus trichocarpa]
gi|550319589|gb|ERP50738.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 1465
Score = 85.9 bits (211), Expect = 7e-15
Identities = 46/73 (63%), Positives = 50/73 (68%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGRXXXXXXXX 180
LI+GCFIRRGL PAFKEI EKLGFVRPKKFAK ALLSDD REK I+ IEG
Sbjct: 1391 LIEGCFIRRGLVPAFKEINEKLGFVRPKKFAKFALLSDDRREKAIQVFIEGGKEKKEKMK 1450
Query: 181 XXVGLRGKTRFSS 219
+GK+R S
Sbjct: 1451 KRDAGKGKSRSCS 1463
>ref|XP_002327945.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 85.5 bits (210), Expect = 9e-15
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEG 153
LI+GCFIRRGL PAFKEI EKLGFVRPKKFAK ALLSDD REK I+ IEG
Sbjct: 1376 LIEGCFIRRGLVPAFKEINEKLGFVRPKKFAKFALLSDDRREKAIQVFIEG 1426
>gb|ESR41751.1| hypothetical protein CICLE_v100138541mg, partial [Citrus
clementina]
Length = 205
Score = 84.3 bits (207), Expect = 2e-14
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGR 156
LI GCFIRRGL PAFK+ITE+LG VRPKKFA+LALL DD R K I+ADIEGR
Sbjct: 119 LIGGCFIRRGLVPAFKDITERLGIVRPKKFARLALLPDDRRVKAIQADIEGR 170
>gb|EEE90276.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa]
Length = 1484
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/51 (80%), Positives = 44/51 (86%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEG 153
LI+GCFIR GL PAFKEI EK+GFVRPKKFAK ALLSDD REK I+A IEG
Sbjct: 1392 LIEGCFIRSGLVPAFKEINEKVGFVRPKKFAKFALLSDDRREKAIQAFIEG 1442
>ref|XP_002309826.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/51 (80%), Positives = 44/51 (86%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEG 153
LI+GCFIR GL PAFKEI EK+GFVRPKKFAK ALLSDD REK I+A IEG
Sbjct: 1388 LIEGCFIRSGLVPAFKEINEKVGFVRPKKFAKFALLSDDRREKAIQAFIEG 1438
>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 83.2 bits (204), Expect = 5e-14
Identities = 40/70 (57%), Positives = 53/70 (75%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGRXXXXXXXX 180
L++GCF+RRGL PAFK+ITE+LG VRPKKFA+LALL D+ R+KVI+ADIEG
Sbjct: 1354 LMEGCFLRRGLVPAFKDITERLGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMK 1413
Query: 181 XXVGLRGKTR 210
VG++ + +
Sbjct: 1414 KKVGVKRRRK 1423
>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 83.2 bits (204), Expect = 5e-14
Identities = 40/70 (57%), Positives = 53/70 (75%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGRXXXXXXXX 180
L++GCF+RRGL PAFK+ITE+LG VRPKKFA+LALL D+ R+KVI+ADIEG
Sbjct: 944 LMEGCFLRRGLVPAFKDITERLGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMK 1003
Query: 181 XXVGLRGKTR 210
VG++ + +
Sbjct: 1004 KKVGVKRRRK 1013
>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 83.2 bits (204), Expect = 5e-14
Identities = 40/70 (57%), Positives = 53/70 (75%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGRXXXXXXXX 180
L++GCF+RRGL PAFK+ITE+LG VRPKKFA+LALL D+ R+KVI+ADIEG
Sbjct: 1406 LMEGCFLRRGLVPAFKDITERLGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMK 1465
Query: 181 XXVGLRGKTR 210
VG++ + +
Sbjct: 1466 KKVGVKRRRK 1475
>ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1476
Score = 82.8 bits (203), Expect = 6e-14
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGR 156
LI+GCFIRRGL PAFKEI E+LG V P+KFA+LALLS++ REKVI+ADIEGR
Sbjct: 1391 LIEGCFIRRGLVPAFKEINERLGPVNPRKFARLALLSNEKREKVIQADIEGR 1442
>ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Solanum lycopersicum]
Length = 1464
Score = 82.8 bits (203), Expect = 6e-14
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGR 156
LI+GCFIRRGL PAFKEI E+LG V P+KFA+LALLS++ REKVI+ADIEGR
Sbjct: 1379 LIEGCFIRRGLVPAFKEINERLGPVNPRKFARLALLSNEKREKVIQADIEGR 1430
>ref|XP_004511471.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502159333|ref|XP_004511472.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 1489
Score = 79.0 bits (193), Expect = 9e-13
Identities = 38/52 (73%), Positives = 43/52 (82%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGR 156
LI GCFIRRGL PAF EITEKL V PKKF++LALL DD R KV++AD+EGR
Sbjct: 1379 LISGCFIRRGLVPAFNEITEKLEVVSPKKFSRLALLPDDKRSKVMQADVEGR 1430
>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/52 (71%), Positives = 44/52 (84%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLGFVRPKKFAKLALLSDDIREKVIKADIEGR 156
LI+GCFIRRGL PAF EITEKL V PKKF++LALL DD R KV++AD++GR
Sbjct: 1396 LINGCFIRRGLVPAFNEITEKLKVVSPKKFSRLALLPDDKRSKVMQADVDGR 1447
>ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product
[Arabidopsis thaliana] gi|332642528|gb|AEE76049.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 1440
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/52 (73%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLG-FVRPKKFAKLALLSDDIREKVIKADIEG 153
LIDGCFIRRGL PAF I E+LG FV PKKF++LALL D++RE+VIK DIEG
Sbjct: 1359 LIDGCFIRRGLVPAFNHIKERLGGFVSPKKFSRLALLPDEMRERVIKTDIEG 1410
>ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata
subsp. lyrata]
Length = 1429
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/52 (73%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLG-FVRPKKFAKLALLSDDIREKVIKADIEG 153
LIDGCFIRRGL PAF I E+LG FV PKKF++LALL D++RE+VIK DIEG
Sbjct: 1348 LIDGCFIRRGLVPAFNHIKERLGGFVSPKKFSRLALLPDEMRERVIKTDIEG 1399
>gb|ACJ11249.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 347
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/52 (73%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Frame = +1
Query: 1 LIDGCFIRRGLAPAFKEITEKLG-FVRPKKFAKLALLSDDIREKVIKADIEG 153
LIDGCFIRRGL PAF I E+LG FV PKKF++LALL D++RE+VIK DIEG
Sbjct: 267 LIDGCFIRRGLVPAFNHIKERLGGFVSPKKFSRLALLPDEMRERVIKTDIEG 318