BLASTX nr result

ID: Jatropha_contig00032803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00032803
         (332 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX99431.1| Ubiquitin-conjugating enzyme family protein, puta...    82   5e-14
gb|ABK95695.1| unknown [Populus trichocarpa] gi|550325762|gb|ERP...    77   2e-12
ref|XP_002517911.1| ubiquitin conjugating enzyme, putative [Rici...    67   3e-09
gb|EOX99432.1| Ubiquitin-conjugating enzyme family protein, puta...    57   2e-06

>gb|EOX99431.1| Ubiquitin-conjugating enzyme family protein, putative isoform 1
           [Theobroma cacao]
          Length = 516

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 43/96 (44%), Positives = 63/96 (65%)
 Frame = +2

Query: 44  MDLHMEDQASISKKLKHSEVVLCDVMDVESNLDPSEVLVGHENVDTYSKGKSKVGYSASR 223
           MDL + D+ SISK+LK ++++LCD MD+    DP+ VL+G E     SKGKSK+ Y    
Sbjct: 1   MDLRV-DETSISKRLKQTQILLCDAMDIGQVEDPTTVLIGSEKAGVDSKGKSKICYDKKW 59

Query: 224 PHNIKDTSSCDPGISTSIAGTVDIIDYLKISTTGSM 331
             ++KD S+ + G S S+AG+ D  + LK ST+GS+
Sbjct: 60  EDHVKDASASEQGNSVSVAGSEDSNNPLKSSTSGSI 95


>gb|ABK95695.1| unknown [Populus trichocarpa] gi|550325762|gb|ERP54283.1|
           hypothetical protein POPTR_0013s13440g [Populus
           trichocarpa] gi|550325763|gb|ERP54284.1| hypothetical
           protein POPTR_0013s13440g [Populus trichocarpa]
          Length = 526

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
 Frame = +2

Query: 44  MDLHMED---QASISKKLKHSEVVLCDVMDVESNLDPSEVLVGHENVDTYSKGKSKVGYS 214
           MDL M D     +ISKKLK SEVVLCDVMD ++     EVL+ H   D  +KGKSK  + 
Sbjct: 1   MDLDMADGNQDVAISKKLKQSEVVLCDVMDAQA-----EVLICHGKADMGTKGKSKSVHD 55

Query: 215 ASRPHNIKDTSSCDPGISTSIAGTVDIIDYLKISTTGS 328
            +   +IK+ SS D G  TS+AG+VD   +L+ ST+GS
Sbjct: 56  DAWQQDIKNASSSDLGNYTSVAGSVDSAYHLRGSTSGS 93


>ref|XP_002517911.1| ubiquitin conjugating enzyme, putative [Ricinus communis]
           gi|223542893|gb|EEF44429.1| ubiquitin conjugating
           enzyme, putative [Ricinus communis]
          Length = 521

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/96 (41%), Positives = 56/96 (58%)
 Frame = +2

Query: 44  MDLHMEDQASISKKLKHSEVVLCDVMDVESNLDPSEVLVGHENVDTYSKGKSKVGYSASR 223
           M++ ++DQ SIS  L   E VL D MDVE ++D        E  DT SKGK+KVG   + 
Sbjct: 1   MNIDIDDQVSISNNLNQKEAVLFDAMDVERDVD--------EKADTSSKGKTKVGDDVTW 52

Query: 224 PHNIKDTSSCDPGISTSIAGTVDIIDYLKISTTGSM 331
            H+       D G++ S+AG+VD  D+ K ST+GS+
Sbjct: 53  QHH------QDSGLNASVAGSVDSNDHPKSSTSGSI 82


>gb|EOX99432.1| Ubiquitin-conjugating enzyme family protein, putative isoform 2
           [Theobroma cacao]
          Length = 492

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/71 (42%), Positives = 43/71 (60%)
 Frame = +2

Query: 119 MDVESNLDPSEVLVGHENVDTYSKGKSKVGYSASRPHNIKDTSSCDPGISTSIAGTVDII 298
           MD+    DP+ VL+G E     SKGKSK+ Y      ++KD S+ + G S S+AG+ D  
Sbjct: 1   MDIGQVEDPTTVLIGSEKAGVDSKGKSKICYDKKWEDHVKDASASEQGNSVSVAGSEDSN 60

Query: 299 DYLKISTTGSM 331
           + LK ST+GS+
Sbjct: 61  NPLKSSTSGSI 71


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