BLASTX nr result
ID: Jatropha_contig00032222
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00032222
(656 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 98 2e-18
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 98 2e-18
emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera] 98 2e-18
gb|EEE78905.2| hypothetical protein POPTR_0003s19630g [Populus t... 95 2e-17
ref|XP_002303926.1| predicted protein [Populus trichocarpa] 95 2e-17
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative... 92 1e-16
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 91 2e-16
gb|ESR33958.1| hypothetical protein CICLE_v10004129mg [Citrus cl... 91 3e-16
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 90 5e-16
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 90 5e-16
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E sub... 87 5e-15
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 86 7e-15
ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub... 84 3e-14
gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus... 84 3e-14
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 84 4e-14
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218... 83 8e-14
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 83 8e-14
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe... 82 2e-13
ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps... 81 2e-13
gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis th... 78 2e-12
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 97.8 bits (242), Expect = 2e-18
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQLQNVV 182
SF ++RCFYVVSTDG ++DFSYRKCLENF+K KYPD AE F GKYF RPR+ G + ++V+
Sbjct: 1809 SFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAGGNRERSVI 1868
Query: 183 SERTGDDSKWQNSVSEGTGEGNQQ 254
E G ++ Q+ V E TG N+Q
Sbjct: 1869 PEDGG--NREQSVVPEETGSENRQ 1890
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 97.8 bits (242), Expect = 2e-18
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQLQNVV 182
SF ++RCFYVVSTDG ++DFSYRKCLENF+K KYPD AE F GKYF RPR+ G + ++V+
Sbjct: 1749 SFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAGGNRERSVI 1808
Query: 183 SERTGDDSKWQNSVSEGTGEGNQQ 254
E G ++ Q+ V E TG N+Q
Sbjct: 1809 PEDGG--NREQSVVPEETGSENRQ 1830
>emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera]
Length = 1081
Score = 97.8 bits (242), Expect = 2e-18
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQLQNVV 182
SF ++RCFYVVSTDG ++DFSYRKCLENF+K KYPD AE F GKYF RPR+ G + ++V+
Sbjct: 1000 SFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAGGNRERSVI 1059
Query: 183 SERTGDDSKWQNSVSEGTGEGNQQ 254
E G ++ Q+ V E TG N+Q
Sbjct: 1060 PEDGG--NREQSVVPEETGSENRQ 1081
>gb|EEE78905.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 94.7 bits (234), Expect = 2e-17
Identities = 40/52 (76%), Positives = 48/52 (92%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSR 158
+FQ++RCFY+VSTDGC+QDFSYRKCLENF+KGKYPDLA+EF KYFAR +R
Sbjct: 1853 NFQESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPDLADEFIAKYFARRGNR 1904
>ref|XP_002303926.1| predicted protein [Populus trichocarpa]
Length = 1020
Score = 94.7 bits (234), Expect = 2e-17
Identities = 40/52 (76%), Positives = 48/52 (92%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSR 158
+FQ++RCFY+VSTDGC+QDFSYRKCLENF+KGKYPDLA+EF KYFAR +R
Sbjct: 953 NFQESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPDLADEFIAKYFARRGNR 1004
>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 92.4 bits (228), Expect = 1e-16
Identities = 40/69 (57%), Positives = 54/69 (78%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQLQNVV 182
+F D+RCFYVVSTDG +QDFSYRKCL+NF+KGKYPD+A+ F KYF +PR G + ++V
Sbjct: 1719 NFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGKYPDMADVFIAKYFRKPRFGGFRERSVA 1778
Query: 183 SERTGDDSK 209
E T +++
Sbjct: 1779 PENTEGENR 1787
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 91.3 bits (225), Expect = 2e-16
Identities = 39/69 (56%), Positives = 53/69 (76%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQLQNVV 182
SFQ++RC +V+STDG ++DFSYRKCL+N +K KYP+LAE FN KYF+RPR R
Sbjct: 1923 SFQESRCLFVISTDGRKEDFSYRKCLQNMIKEKYPELAEAFNDKYFSRPRPRNPMFGQTP 1982
Query: 183 SERTGDDSK 209
ERTG++++
Sbjct: 1983 PERTGNETQ 1991
>gb|ESR33958.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 90.9 bits (224), Expect = 3e-16
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQ---LQ 173
SFQD+RC +VVSTDG +QDFSYRKCLE+F++GKYP+ +EF GKYF RPRS G + L
Sbjct: 1797 SFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPEFVDEFIGKYFRRPRSGGNREPSLP 1856
Query: 174 NVVSERTGD 200
V E+T D
Sbjct: 1857 PVPEEKTVD 1865
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 90.1 bits (222), Expect = 5e-16
Identities = 41/68 (60%), Positives = 52/68 (76%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQLQNVV 182
SFQ++RCFYVV+TDG ++DFSYRKCL+NF+KGKYPDLAE F KYF +PR + +N
Sbjct: 1874 SFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRPNRNRDRNPA 1933
Query: 183 SERTGDDS 206
SE + S
Sbjct: 1934 SEENENKS 1941
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 90.1 bits (222), Expect = 5e-16
Identities = 41/68 (60%), Positives = 52/68 (76%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQLQNVV 182
SFQ++RCFYVV+TDG ++DFSYRKCL+NF+KGKYPDLAE F KYF +PR + +N
Sbjct: 1934 SFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRPNRNRDRNPA 1993
Query: 183 SERTGDDS 206
SE + S
Sbjct: 1994 SEENENKS 2001
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
Length = 2020
Score = 86.7 bits (213), Expect = 5e-15
Identities = 39/75 (52%), Positives = 53/75 (70%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQLQNVV 182
SFQ++RCFYVV DG +DFSYRKCL N++ KYPDLAE F GKYF +PR+RG Q +
Sbjct: 1944 SFQESRCFYVVCKDGQSKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRARGDQTATLG 2003
Query: 183 SERTGDDSKWQNSVS 227
++T ++ + + S
Sbjct: 2004 GDQTATPAQDEAATS 2018
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1 [Solanum lycopersicum]
Length = 1632
Score = 86.3 bits (212), Expect = 7e-15
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARP 149
+FQDTRCFYVVSTDG +QDFS RKCLENFV+ KYPD AE FN KYF +P
Sbjct: 1562 NFQDTRCFYVVSTDGAKQDFSTRKCLENFVRSKYPDKAETFNEKYFKKP 1610
>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
Length = 2098
Score = 84.3 bits (207), Expect = 3e-14
Identities = 37/55 (67%), Positives = 44/55 (80%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQ 167
SFQ++RCFYVV DG +DFSYRKCL N++ KYPDLAE F GKYF +PR+RG Q
Sbjct: 2003 SFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRARGDQ 2057
>gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 84.0 bits (206), Expect = 3e-14
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQLQNVV 182
SFQD+RCFYVV DG +DFSYRKCL+N+++ KYP+LAE F GKYF +PR+R Q
Sbjct: 1964 SFQDSRCFYVVLKDGRREDFSYRKCLDNWIRKKYPELAESFFGKYFRKPRNRAEQTATPR 2023
Query: 183 SERT 194
++T
Sbjct: 2024 GDQT 2027
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 83.6 bits (205), Expect = 4e-14
Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQLQNVV 182
+FQ++RCFYVV DG ++DFSYRKCLE+FV+ KY D AE F GKYF +PR + Q+ N
Sbjct: 2145 NFQESRCFYVVLKDGKKEDFSYRKCLESFVRKKYADTAESFCGKYFRKPRPKRDQIANSG 2204
Query: 183 SERTGDDSKWQNSVSEG----TGEGNQQ 254
E+T + Q + G T G +Q
Sbjct: 2205 GEQTANPGGEQTATPGGEQTTTPNGGEQ 2232
>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1|
Protein DCL [Medicago truncatula]
Length = 481
Score = 82.8 bits (203), Expect = 8e-14
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFAR--PRSRGIQLQN 176
+FQD+RC YVV DG ++DFSYRKCLEN V+ KYP+ AE F GKYF + PR + Q N
Sbjct: 359 NFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRVKRDQTPN 418
Query: 177 VVSERTG--DDSKWQNSVSEGTGEGNQQQNVVSERTGDDSKWQNSVSEGTGD 326
E+T + + Q + GE QN E+T + + GD
Sbjct: 419 PAGEQTAAPNPAGEQTAAPNPAGEQTATQNPPGEQTSTPNPAEEQTPTPAGD 470
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 82.8 bits (203), Expect = 8e-14
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFAR--PRSRGIQLQN 176
+FQD+RC YVV DG ++DFSYRKCLEN V+ KYP+ AE F GKYF + PR + Q N
Sbjct: 1910 NFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRVKRDQTPN 1969
Query: 177 VVSERTG--DDSKWQNSVSEGTGEGNQQQNVVSERTGDDSKWQNSVSEGTGD 326
E+T + + Q + GE QN E+T + + GD
Sbjct: 1970 PAGEQTAAPNPAGEQTAAPNPAGEQTATQNPPGEQTSTPNPAEEQTPTPAGD 2021
>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 81.6 bits (200), Expect = 2e-13
Identities = 35/52 (67%), Positives = 45/52 (86%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSR 158
SFQD+RCF+VVSTDG +DFSYRKCL+N+++ K+PDLAE F GKYF+R +R
Sbjct: 1777 SFQDSRCFFVVSTDGRTEDFSYRKCLDNYIREKFPDLAETFIGKYFSRRGNR 1828
>ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella]
gi|482562261|gb|EOA26451.1| hypothetical protein
CARUB_v10022497mg [Capsella rubella]
Length = 1959
Score = 81.3 bits (199), Expect = 2e-13
Identities = 43/114 (37%), Positives = 65/114 (57%)
Frame = +3
Query: 3 SFQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQLQNVV 182
+F DTRCF+VVSTDG +QDFSYRK L N++ KYPD AEEF KYF +PR G + +N
Sbjct: 1795 TFTDTRCFFVVSTDGAKQDFSYRKSLNNYLMTKYPDRAEEFIDKYFKKPRPSGNRDRN-N 1853
Query: 183 SERTGDDSKWQNSVSEGTGEGNQQQNVVSERTGDDSKWQNSVSEGTGDGSKWQN 344
+ T + +++ G G+++ ++ ++ Q T S+ Q+
Sbjct: 1854 QDATPPGEEQSQPLTQSIGNGSEEDFQTQTQSQSPNQTQTQSPSQTQAPSQTQS 1907
>gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis thaliana]
Length = 1976
Score = 78.2 bits (191), Expect = 2e-12
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +3
Query: 6 FQDTRCFYVVSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSRGIQ-LQNVV 182
F D+RCF+VVSTDG +QDFSYRK L N++ KYPD AEEF KYF +PR G + N
Sbjct: 1803 FSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTKPRPSGNRDRNNQD 1862
Query: 183 SERTGDDSKWQNSVSEGTGEGNQQQNVVSE 272
+ G++ + S G G + Q S+
Sbjct: 1863 ATPPGEEQSQPPNQSIGNGGDDFQTQTQSQ 1892