BLASTX nr result

ID: Jatropha_contig00032116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00032116
         (586 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516964.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
gb|ERP48107.1| hypothetical protein POPTR_0036s00230g [Populus t...    55   1e-05

>ref|XP_002516964.1| conserved hypothetical protein [Ricinus communis]
           gi|223544052|gb|EEF45578.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 111

 Score =  100 bits (250), Expect = 2e-19
 Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
 Frame = +2

Query: 104 ASNIDDRLLNAAF-EGFSSLEGRRNKRPNPAAGRPQTQSATNNHHQLPAITSKEAAQRYG 280
           +  +D R L AA  EGF+++E R  K+P  A GR Q  +   N   L  I SKEAA+RYG
Sbjct: 3   SQKVDRRALEAAASEGFATIEARLTKKP--ATGRVQNPNHQRNEASL--INSKEAAKRYG 58

Query: 281 GIVIEPVITSDKAAKRYGGIVIGPAVTSDMAVQRYGGVLITDRPTEK 421
            +VIE VITS KAA+ YGG++IGPA++SD  VQRYG +LI DRP +K
Sbjct: 59  CMVIERVITSAKAAQTYGGVLIGPAISSDTVVQRYGAILIPDRPRDK 105


>gb|ERP48107.1| hypothetical protein POPTR_0036s00230g [Populus trichocarpa]
          Length = 117

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
 Frame = +2

Query: 119 DRLLNAAFEGFSSLEGRRNKRPNPAAGRPQTQSATNNHH--------------------- 235
           DRL     EGF+ +E      P  +   P TQ   N+HH                     
Sbjct: 6   DRLTRIGMEGFALIENSYGW-PGRSGRLPSTQVQQNHHHYHHHHHHRQYQDQQTLVYQGT 64

Query: 236 -----QLPAITSKEAAQRYGGIVIEPVITSDKAAKRYGGIVIGPAVTSDMAVQ 379
                ++P I S E  Q YG +V +PVI S++AA+  GG+V  P +TSD A Q
Sbjct: 65  QITTVRMPVIISNEVVQYYGNMVKKPVIPSNEAAQYQGGVVKEPVITSDEAAQ 117


Top