BLASTX nr result

ID: Jatropha_contig00032020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00032020
         (315 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE90198.2| hypothetical protein POPTR_0007s01070g [Populus t...    57   2e-06
ref|XP_002309748.1| predicted protein [Populus trichocarpa]            57   2e-06
ref|XP_002863600.1| predicted protein [Arabidopsis lyrata subsp....    55   7e-06
ref|NP_001078707.1| protease inhibitor/seed storage/LTP family p...    55   7e-06
ref|XP_006281881.1| hypothetical protein CARUB_v10028079mg [Caps...    55   9e-06

>gb|EEE90198.2| hypothetical protein POPTR_0007s01070g [Populus trichocarpa]
          Length = 119

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = +3

Query: 3   IGPRWICRCIESISKATEDRFNATRIDQLPLLCDTYLSFPISENMDC 143
           +GPR IC CIE I +    +  A RI  LP+ C+T+LSFPISE MDC
Sbjct: 67  MGPRAICECIEIIIRTIPMKLRADRISDLPVRCNTHLSFPISEYMDC 113


>ref|XP_002309748.1| predicted protein [Populus trichocarpa]
          Length = 117

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = +3

Query: 3   IGPRWICRCIESISKATEDRFNATRIDQLPLLCDTYLSFPISENMDC 143
           +GPR IC CIE I +    +  A RI  LP+ C+T+LSFPISE MDC
Sbjct: 67  MGPRAICECIEIIIRTIPMKLRADRISDLPVRCNTHLSFPISEYMDC 113


>ref|XP_002863600.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309435|gb|EFH39859.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 126

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/45 (51%), Positives = 32/45 (71%)
 Frame = +3

Query: 9   PRWICRCIESISKATEDRFNATRIDQLPLLCDTYLSFPISENMDC 143
           PR +C C+E +++       A +I QLPLLC+T+LSFPIS +MDC
Sbjct: 79  PRLLCNCVEMMTRGYTPPILADKIQQLPLLCNTHLSFPISSSMDC 123


>ref|NP_001078707.1| protease inhibitor/seed storage/LTP family protein [Arabidopsis
           thaliana] gi|218527937|sp|A8MQA2.1|NLTPD_ARATH RecName:
           Full=Non-specific lipid-transfer protein 13; Short=LTP
           13; Flags: Precursor gi|332007700|gb|AED95083.1|
           protease inhibitor/seed storage/LTP family protein
           [Arabidopsis thaliana]
          Length = 126

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/45 (51%), Positives = 32/45 (71%)
 Frame = +3

Query: 9   PRWICRCIESISKATEDRFNATRIDQLPLLCDTYLSFPISENMDC 143
           PR +C C+E +++       A +I QLPLLC+T+LSFPIS +MDC
Sbjct: 79  PRLLCNCVEMMTRGYTPPMLADKIQQLPLLCNTHLSFPISSSMDC 123


>ref|XP_006281881.1| hypothetical protein CARUB_v10028079mg [Capsella rubella]
           gi|482550585|gb|EOA14779.1| hypothetical protein
           CARUB_v10028079mg [Capsella rubella]
          Length = 125

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 23/45 (51%), Positives = 32/45 (71%)
 Frame = +3

Query: 9   PRWICRCIESISKATEDRFNATRIDQLPLLCDTYLSFPISENMDC 143
           PR +C C+E +++       A +I QLPLLC+T+LSFPIS +MDC
Sbjct: 79  PRLLCNCVEIMTRGYTPPMLADKIQQLPLLCNTHLSFPISSSMDC 123


Top