BLASTX nr result

ID: Jatropha_contig00031150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00031150
         (527 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325223.1| predicted protein [Populus trichocarpa] gi|2...   151   9e-35
ref|XP_002308985.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
gb|ABK92543.1| unknown [Populus trichocarpa]                          140   1e-31
gb|EMJ03916.1| hypothetical protein PRUPE_ppa012804mg [Prunus pe...   133   2e-29
ref|XP_002285234.1| PREDICTED: uncharacterized protein LOC100250...   131   8e-29
emb|CAN71764.1| hypothetical protein VITISV_039227 [Vitis vinifera]   131   8e-29
gb|EMJ05950.1| hypothetical protein PRUPE_ppa013063mg [Prunus pe...   131   1e-28
gb|ESR64164.1| hypothetical protein CICLE_v10010005mg [Citrus cl...   128   8e-28
gb|EOY31081.1| Ribosomal protein L36, putative [Theobroma cacao]      127   1e-27
ref|XP_006288954.1| hypothetical protein CARUB_v10002319mg [Caps...   114   1e-23
ref|NP_197518.1| ribosomal protein L36 [Arabidopsis thaliana] gi...   114   2e-23
ref|XP_002871926.1| ribosomal protein L36 family protein [Arabid...   113   3e-23
ref|XP_003609341.1| 50S ribosomal protein L36 [Medicago truncatu...   112   6e-23
gb|ESQ42039.1| hypothetical protein EUTSA_v10015097mg [Eutrema s...   111   8e-23
ref|XP_004287309.1| PREDICTED: 50S ribosomal protein L36-like is...   110   2e-22
ref|NP_001238540.1| uncharacterized protein LOC100306418 [Glycin...   110   2e-22
ref|XP_004150587.1| PREDICTED: uncharacterized protein LOC101223...   110   2e-22
ref|XP_004150586.1| PREDICTED: uncharacterized protein LOC101223...   110   2e-22
pdb|3BBO|6 Chain 6, Homology Model For The Spinach Chloroplast 5...   109   4e-22
gb|AFK46338.1| unknown [Lotus japonicus]                              108   9e-22

>ref|XP_002325223.1| predicted protein [Populus trichocarpa] gi|222866657|gb|EEF03788.1|
           hypothetical protein POPTR_0018s13090g [Populus
           trichocarpa]
          Length = 132

 Score =  151 bits (381), Expect = 9e-35
 Identities = 77/122 (63%), Positives = 87/122 (71%)
 Frame = +3

Query: 39  FQGPFTIQNATHPGSQPPIVAMKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGF 218
           F  P  +Q   H    P IVAMKVRSSVKKMCEFCQIVKRRGR+YV+CSSNPKHKQRQGF
Sbjct: 18  FNTPIILQTLRH---NPTIVAMKVRSSVKKMCEFCQIVKRRGRIYVICSSNPKHKQRQGF 74

Query: 219 FTFAYEGTTSTEISANQGITSNHDMGIGLASIIPKNIVPKKHEPSMIYGWSGNLASLLFK 398
            TFAY G  S E +A   I  +  MGIGLAS++     PKK+EPS +YGW   L+S LFK
Sbjct: 75  ATFAYSGLISAETTAPPRIVPSQSMGIGLASLL-----PKKYEPSTMYGWRAGLSSFLFK 129

Query: 399 QG 404
           QG
Sbjct: 130 QG 131


>ref|XP_002308985.1| predicted protein [Populus trichocarpa] gi|222854961|gb|EEE92508.1|
           hypothetical protein POPTR_0006s06830g [Populus
           trichocarpa]
          Length = 97

 Score =  141 bits (355), Expect = 1e-31
 Identities = 68/101 (67%), Positives = 79/101 (78%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITS 281
           MKVRSSVKKMCEFCQIVKRRGR+YV+C+SNPKHKQRQGF T AY G  S E SA QGI  
Sbjct: 1   MKVRSSVKKMCEFCQIVKRRGRIYVICNSNPKHKQRQGFSTLAYGGLISAETSAPQGIIP 60

Query: 282 NHDMGIGLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQG 404
           +   G+GLA++I     PKKHEPS +YGW  +L+S +FKQG
Sbjct: 61  SQSTGVGLATLI-----PKKHEPSAMYGWRADLSSFVFKQG 96


>gb|ABK92543.1| unknown [Populus trichocarpa]
          Length = 97

 Score =  140 bits (354), Expect = 1e-31
 Identities = 69/101 (68%), Positives = 78/101 (77%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITS 281
           MKVRSSVKKMCEFCQIVKRRGR+YV+CSSNPKHKQRQGF TFAY G  S E +A   I  
Sbjct: 1   MKVRSSVKKMCEFCQIVKRRGRIYVICSSNPKHKQRQGFATFAYSGLISAETTAPPRIVP 60

Query: 282 NHDMGIGLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQG 404
           +  MGIGLAS++     PKK+EPS +YGW   L+S LFKQG
Sbjct: 61  SQSMGIGLASLL-----PKKYEPSTMYGWRAGLSSFLFKQG 96


>gb|EMJ03916.1| hypothetical protein PRUPE_ppa012804mg [Prunus persica]
          Length = 154

 Score =  133 bits (335), Expect = 2e-29
 Identities = 80/136 (58%), Positives = 91/136 (66%), Gaps = 9/136 (6%)
 Frame = +3

Query: 27  RQRRFQGPFTIQNATHPGSQPPIVAMKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQ 206
           R+RR  G F I N T    + P VAMKVRSSVKKMCEFC+ VKRRGRVYV+C++NPKHKQ
Sbjct: 27  RERR--GHFFI-NQTKRRRRQPSVAMKVRSSVKKMCEFCKTVKRRGRVYVLCTANPKHKQ 83

Query: 207 RQGFFTFAYEGTTST---EISANQGITSNHDMGIGLASIIPKNIVPKKHEPSM------I 359
           RQG  TFAYEGT S+   E SA    +S H +  GLAS+I     PKKHEPSM      I
Sbjct: 84  RQGMSTFAYEGTVSSIYAETSAKLENSSGHSVQAGLASLI-----PKKHEPSMPSIPSTI 138

Query: 360 YGWSGNLASLLFKQGK 407
            GW   LASLLF + K
Sbjct: 139 LGWRVGLASLLFNEAK 154


>ref|XP_002285234.1| PREDICTED: uncharacterized protein LOC100250810 isoform 2 [Vitis
           vinifera] gi|297738962|emb|CBI28207.3| unnamed protein
           product [Vitis vinifera]
          Length = 100

 Score =  131 bits (330), Expect = 8e-29
 Identities = 68/103 (66%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEG---TTSTEISANQG 272
           MKVRSSVKKMCE+C+ VKRRGRVYV+C++NPKHKQRQG  TFA+EG     S+E++A Q 
Sbjct: 1   MKVRSSVKKMCEYCRTVKRRGRVYVLCTANPKHKQRQGMSTFAHEGPLPPMSSEMNAKQE 60

Query: 273 ITSNHDMGIGLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQ 401
           I+ NH +  GLASII     PKK EPSM+YGW  +LASLLFKQ
Sbjct: 61  ISRNHRLQGGLASII-----PKKPEPSMMYGWRASLASLLFKQ 98


>emb|CAN71764.1| hypothetical protein VITISV_039227 [Vitis vinifera]
          Length = 100

 Score =  131 bits (330), Expect = 8e-29
 Identities = 68/103 (66%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEG---TTSTEISANQG 272
           MKVRSSVKKMCE+C+ VKRRGRVYV+C++NPKHKQRQG  TFA+EG     S+E++A Q 
Sbjct: 1   MKVRSSVKKMCEYCRTVKRRGRVYVLCTANPKHKQRQGMSTFAHEGPLPPMSSEMNAKQE 60

Query: 273 ITSNHDMGIGLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQ 401
           I+ NH +  GLASII     PKK EPSM+YGW  +LASLLFKQ
Sbjct: 61  ISXNHRLQGGLASII-----PKKPEPSMMYGWRASLASLLFKQ 98


>gb|EMJ05950.1| hypothetical protein PRUPE_ppa013063mg [Prunus persica]
          Length = 142

 Score =  131 bits (329), Expect = 1e-28
 Identities = 77/136 (56%), Positives = 88/136 (64%), Gaps = 10/136 (7%)
 Frame = +3

Query: 30  QRRFQGPFTIQ-NATHPGSQPPIVAMKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQ 206
           + R  G F  Q N T    + P VAMKVRSSVKKMCEFC+ VKRRGRVYV+C++NPKHKQ
Sbjct: 12  EEREAGSFLYQPNQTKRRRRQPSVAMKVRSSVKKMCEFCKTVKRRGRVYVLCTANPKHKQ 71

Query: 207 RQGFFTFAYEGTTST---EISANQGITSNHDMGIGLASIIPKNIVPKKHE------PSMI 359
           RQG  TFAYEGT S+   E SA    +S H +  GLAS+I     PKKHE      PS I
Sbjct: 72  RQGMSTFAYEGTVSSMYAETSAKLENSSGHSVQAGLASLI-----PKKHEPLMPSIPSTI 126

Query: 360 YGWSGNLASLLFKQGK 407
            GW   LASLLF + K
Sbjct: 127 LGWRVGLASLLFNKAK 142


>gb|ESR64164.1| hypothetical protein CICLE_v10010005mg [Citrus clementina]
           gi|557554151|gb|ESR64165.1| hypothetical protein
           CICLE_v10010005mg [Citrus clementina]
          Length = 101

 Score =  128 bits (321), Expect = 8e-28
 Identities = 69/105 (65%), Positives = 79/105 (75%), Gaps = 4/105 (3%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGT---TSTEISANQG 272
           MKVRSSVKKMCEFC+I+KRRGRVYV+CS+N KHKQRQG  TFA EG    TS E +  Q 
Sbjct: 1   MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQGMSTFANEGLIPFTSVETNVKQE 60

Query: 273 ITSNHDMGIGLASIIPKNIVPKKHEP-SMIYGWSGNLASLLFKQG 404
           I  NH++  GLAS+I     PKKHE  S+IYGW  +LASLLFKQG
Sbjct: 61  IAPNHNIRAGLASLI-----PKKHESWSIIYGWRASLASLLFKQG 100


>gb|EOY31081.1| Ribosomal protein L36, putative [Theobroma cacao]
          Length = 100

 Score =  127 bits (319), Expect = 1e-27
 Identities = 64/104 (61%), Positives = 76/104 (73%), Gaps = 3/104 (2%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGT---TSTEISANQG 272
           MKVR+SVKKMCEFC+ VKRRGRVYV+C+SNPKHKQRQG  TFA EG    TSTE +    
Sbjct: 1   MKVRASVKKMCEFCRTVKRRGRVYVLCTSNPKHKQRQGISTFASEGALPPTSTETNVKHA 60

Query: 273 ITSNHDMGIGLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQG 404
           I  +H M  GLAS++     PK+ EPS++ GW  NLASL+FK G
Sbjct: 61  IVPSHSMRPGLASLL-----PKRQEPSLMLGWRANLASLIFKSG 99


>ref|XP_006288954.1| hypothetical protein CARUB_v10002319mg [Capsella rubella]
           gi|482557660|gb|EOA21852.1| hypothetical protein
           CARUB_v10002319mg [Capsella rubella]
          Length = 103

 Score =  114 bits (286), Expect = 1e-23
 Identities = 60/107 (56%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGTTS----TEISANQ 269
           MKVRSSVKKMCEFC+ VKRRGRVYV+CSSNPKHKQRQGF +FAYEG T     +E   NQ
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFSESMVNQ 60

Query: 270 GITSNHDMGI--GLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQG 404
            +      G+  GLA+++      K+  P+ ++GW   L+S+LFKQG
Sbjct: 61  EVVRLPSQGVSAGLAALL-----HKRPMPTAVFGWRAGLSSILFKQG 102


>ref|NP_197518.1| ribosomal protein L36 [Arabidopsis thaliana]
           gi|30687686|ref|NP_850857.1| ribosomal protein L36
           [Arabidopsis thaliana] gi|17065488|gb|AAL32898.1|
           Unknown protein [Arabidopsis thaliana]
           gi|20148663|gb|AAM10222.1| unknown protein [Arabidopsis
           thaliana] gi|21555484|gb|AAM63869.1| ribosomal protein
           L36-like [Arabidopsis thaliana]
           gi|222424094|dbj|BAH20007.1| AT5G20180 [Arabidopsis
           thaliana] gi|332005426|gb|AED92809.1| ribosomal protein
           L36 [Arabidopsis thaliana] gi|332005427|gb|AED92810.1|
           ribosomal protein L36 [Arabidopsis thaliana]
          Length = 103

 Score =  114 bits (284), Expect = 2e-23
 Identities = 62/107 (57%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGTTST----EISANQ 269
           MKVRSSVKKMCEFC+ VKRRGRVYV+CSSNPKHKQRQGF +FAYEG T +    E  A+Q
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQ 60

Query: 270 GITSNHDMGI--GLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQG 404
            +      G+  GLAS++ K  +P  +     +GW   LAS+LFKQG
Sbjct: 61  ELVRLPGQGVSAGLASLLHKRPMPTAY-----FGWRSGLASILFKQG 102


>ref|XP_002871926.1| ribosomal protein L36 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317763|gb|EFH48185.1| ribosomal protein
           L36 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score =  113 bits (282), Expect = 3e-23
 Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGTTS----TEISANQ 269
           MKVRSSVKKMCEFC+ VKRRGRVY++CSSNPKHKQRQGF +FAYEG       +E  A+Q
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYIICSSNPKHKQRQGFSSFAYEGIIPSPLLSESIASQ 60

Query: 270 GITSNHDMGI--GLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQG 404
            +T     G+  GLAS++      K+  P+  +GW   LAS+LFKQG
Sbjct: 61  EMTRLPGQGVSAGLASLL-----HKRPMPTAFFGWRSGLASILFKQG 102


>ref|XP_003609341.1| 50S ribosomal protein L36 [Medicago truncatula]
           gi|355510396|gb|AES91538.1| 50S ribosomal protein L36
           [Medicago truncatula] gi|388510640|gb|AFK43386.1|
           unknown [Medicago truncatula]
          Length = 101

 Score =  112 bits (279), Expect = 6e-23
 Identities = 61/106 (57%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGTT---STEIS---A 263
           MKVRSSVKKMCE+C+ +KR+GRVY+MC++NPKHKQRQG  TFAYE  +   S EIS   A
Sbjct: 1   MKVRSSVKKMCEYCRTIKRKGRVYIMCTANPKHKQRQGMSTFAYEAPSHQLSVEISSSCA 60

Query: 264 NQGITSNHDMGIGLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQ 401
            Q I   H    GLASII     P++H  SM+YGW   LAS+L K+
Sbjct: 61  AQEIKPLHTSRTGLASII-----PQRHSLSMLYGWRVGLASILSKK 101


>gb|ESQ42039.1| hypothetical protein EUTSA_v10015097mg [Eutrema salsugineum]
          Length = 103

 Score =  111 bits (278), Expect = 8e-23
 Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEG----TTSTEISANQ 269
           MKVRSSVKKMCEFC+ VKRRGRVYV+CSSNPKHKQRQG+ + A++G       +E  ANQ
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGYCSIAHDGIIPPPLMSESIANQ 60

Query: 270 GITSNHDMGI--GLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQG 404
            +      G+  GLAS++      K+ EP+ ++GW   LAS+LFKQG
Sbjct: 61  EVLKLPGQGVSAGLASLL-----HKRTEPAAVFGWRAGLASILFKQG 102


>ref|XP_004287309.1| PREDICTED: 50S ribosomal protein L36-like isoform 1 [Fragaria vesca
           subsp. vesca] gi|470101706|ref|XP_004287310.1|
           PREDICTED: 50S ribosomal protein L36-like isoform 2
           [Fragaria vesca subsp. vesca]
           gi|470101708|ref|XP_004287311.1| PREDICTED: 50S
           ribosomal protein L36-like isoform 3 [Fragaria vesca
           subsp. vesca]
          Length = 106

 Score =  110 bits (275), Expect = 2e-22
 Identities = 55/104 (52%), Positives = 74/104 (71%), Gaps = 4/104 (3%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITS 281
           MKVRSSVKKMCEFC+ +KRRGRVYV C++NPKHKQRQGF TFAY+G+ +    +   I +
Sbjct: 1   MKVRSSVKKMCEFCKTIKRRGRVYVYCTANPKHKQRQGFSTFAYQGSDAPIFRSTPTIVT 60

Query: 282 NHDMGIGLASIIP-KNIVPKKHE---PSMIYGWSGNLASLLFKQ 401
             ++  G +S +   +++P+K+E   PS   GW   LASLLFK+
Sbjct: 61  KQEINFGQSSHVGLASLIPRKNELSLPSPTLGWRVGLASLLFKK 104


>ref|NP_001238540.1| uncharacterized protein LOC100306418 [Glycine max]
           gi|255628469|gb|ACU14579.1| unknown [Glycine max]
          Length = 99

 Score =  110 bits (275), Expect = 2e-22
 Identities = 60/100 (60%), Positives = 71/100 (71%), Gaps = 3/100 (3%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITS 281
           MKVRSSVKKMCEFCQIVKRRGR+YV+CS NPKHKQRQG  TFA EG  S  +S+    TS
Sbjct: 1   MKVRSSVKKMCEFCQIVKRRGRIYVICSGNPKHKQRQGMATFASEG-PSRPVSSE---TS 56

Query: 282 NHDMGIGLASIIPKNIV---PKKHEPSMIYGWSGNLASLL 392
           +  MGI  A I    ++   P++H  SM+YGW   LAS+L
Sbjct: 57  SWKMGIKPAQIARPGLISNTPQRHSLSMLYGWRVGLASIL 96


>ref|XP_004150587.1| PREDICTED: uncharacterized protein LOC101223220 isoform 2 [Cucumis
           sativus] gi|449465745|ref|XP_004150588.1| PREDICTED:
           uncharacterized protein LOC101223220 isoform 3 [Cucumis
           sativus] gi|449465747|ref|XP_004150589.1| PREDICTED:
           uncharacterized protein LOC101223220 isoform 4 [Cucumis
           sativus] gi|449523620|ref|XP_004168821.1| PREDICTED:
           uncharacterized LOC101223220 isoform 2 [Cucumis sativus]
           gi|449523622|ref|XP_004168822.1| PREDICTED:
           uncharacterized LOC101223220 isoform 3 [Cucumis sativus]
           gi|449523624|ref|XP_004168823.1| PREDICTED:
           uncharacterized LOC101223220 isoform 4 [Cucumis sativus]
          Length = 100

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/103 (56%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGTTSTEIS---ANQG 272
           MKVRSSVKKMCEFC+ VKR+GRVY+ CSSNPKHKQRQG  TFA EG + +  S     Q 
Sbjct: 1   MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQE 60

Query: 273 ITSNHDMGIGLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQ 401
           I  +  +  GLAS+I     P+K+EP+M  GW   LAS+L K+
Sbjct: 61  ILPSQSLRTGLASLI-----PQKNEPTMFLGWRMGLASILLKK 98


>ref|XP_004150586.1| PREDICTED: uncharacterized protein LOC101223220 isoform 1 [Cucumis
           sativus] gi|449523618|ref|XP_004168820.1| PREDICTED:
           uncharacterized LOC101223220 isoform 1 [Cucumis sativus]
          Length = 117

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/103 (56%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGTTSTEIS---ANQG 272
           MKVRSSVKKMCEFC+ VKR+GRVY+ CSSNPKHKQRQG  TFA EG + +  S     Q 
Sbjct: 18  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQE 77

Query: 273 ITSNHDMGIGLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQ 401
           I  +  +  GLAS+I     P+K+EP+M  GW   LAS+L K+
Sbjct: 78  ILPSQSLRTGLASLI-----PQKNEPTMFLGWRMGLASILLKK 115


>pdb|3BBO|6 Chain 6, Homology Model For The Spinach Chloroplast 50s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
          Length = 104

 Score =  109 bits (272), Expect = 4e-22
 Identities = 62/108 (57%), Positives = 75/108 (69%), Gaps = 7/108 (6%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQ-GFFTFAYEGTTST----EISAN 266
           MKVRSSVKKMCEFC+ VKRRGRVYV+CSSNPKHKQRQ GF +FAYEG T +    E  A+
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGGFSSFAYEGITPSPLFAEPIAS 60

Query: 267 QGITSNHDMGI--GLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQG 404
           Q +      G+  GLAS++ K  +P  +     +GW   LAS+LFKQG
Sbjct: 61  QELVRLPGQGVSAGLASLLHKRPMPTAY-----FGWRSGLASILFKQG 103


>gb|AFK46338.1| unknown [Lotus japonicus]
          Length = 99

 Score =  108 bits (269), Expect = 9e-22
 Identities = 60/104 (57%), Positives = 73/104 (70%), Gaps = 4/104 (3%)
 Frame = +3

Query: 102 MKVRSSVKKMCEFCQIVKRRGRVYVMCSSNPKHKQRQGFFTFAYEGTT---STEI-SANQ 269
           MKVRSSVKKMCEFC+ VKRRGRVYV+CS+NPKHKQRQG  TFA EG +   S EI SA Q
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSANPKHKQRQGMSTFANEGPSNPVSLEISSAKQ 60

Query: 270 GITSNHDMGIGLASIIPKNIVPKKHEPSMIYGWSGNLASLLFKQ 401
            I     +  G     P +I P++H  SM+YGW   L+S+LF++
Sbjct: 61  EIRLPLTLRPG-----PASIFPRRHSLSMLYGWRVGLSSILFRK 99


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