BLASTX nr result
ID: Jatropha_contig00030738
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00030738
(642 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511040.1| Mediator of RNA polymerase II transcription ... 91 3e-16
gb|ESR50275.1| hypothetical protein CICLE_v10032791mg [Citrus cl... 81 2e-13
gb|EEF05907.2| hypothetical protein POPTR_0015s12240g [Populus t... 81 2e-13
ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II tra... 80 5e-13
ref|XP_004166615.1| PREDICTED: mediator of RNA polymerase II tra... 80 6e-13
ref|XP_004146891.1| PREDICTED: mediator of RNA polymerase II tra... 80 6e-13
ref|XP_004307766.1| PREDICTED: mediator of RNA polymerase II tra... 79 1e-12
gb|EMJ19629.1| hypothetical protein PRUPE_ppa011632mg [Prunus pe... 78 2e-12
ref|XP_004307765.1| PREDICTED: mediator of RNA polymerase II tra... 76 9e-12
ref|XP_002321780.1| predicted protein [Populus trichocarpa] 76 9e-12
gb|EMJ19630.1| hypothetical protein PRUPE_ppa011632mg [Prunus pe... 75 1e-11
ref|NP_001235064.1| uncharacterized protein LOC100527879 [Glycin... 75 1e-11
ref|XP_006358189.1| PREDICTED: mediator of RNA polymerase II tra... 75 2e-11
ref|XP_004235202.1| PREDICTED: mediator of RNA polymerase II tra... 75 2e-11
ref|XP_002339509.1| predicted protein [Populus trichocarpa] 74 3e-11
gb|ESW15321.1| hypothetical protein PHAVU_007G063000g [Phaseolus... 74 4e-11
gb|AFK36513.1| unknown [Medicago truncatula] 74 4e-11
gb|AFK35607.1| unknown [Lotus japonicus] 73 6e-11
gb|ERP54748.1| hypothetical protein POPTR_0012s11490g, partial [... 72 1e-10
ref|XP_006358186.1| PREDICTED: mediator of RNA polymerase II tra... 71 2e-10
>ref|XP_002511040.1| Mediator of RNA polymerase II transcription subunit, putative
[Ricinus communis] gi|223550155|gb|EEF51642.1| Mediator
of RNA polymerase II transcription subunit, putative
[Ricinus communis]
Length = 123
Score = 90.5 bits (223), Expect = 3e-16
Identities = 51/101 (50%), Positives = 51/101 (50%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
PGNKEL HRQQFFFWKNYRNNRLKHIL
Sbjct: 24 PGNKELTHRQQFFFWKNYRNNRLKHIL-PRPLPEPVPTPPTSALPLPPLQSSPVPPTTVA 82
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKEV 304
YGM PGS LAKNDMRN GIDRRKRKKEV
Sbjct: 83 MPAASASALSPMPYGMPPGSTLAKNDMRNTGIDRRKRKKEV 123
>gb|ESR50275.1| hypothetical protein CICLE_v10032791mg [Citrus clementina]
gi|557539232|gb|ESR50276.1| hypothetical protein
CICLE_v10032791mg [Citrus clementina]
Length = 199
Score = 81.3 bits (199), Expect = 2e-13
Identities = 46/100 (46%), Positives = 50/100 (50%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
P NKELAHRQQFFFWKNYRNNRLKHIL
Sbjct: 104 PANKELAHRQQFFFWKNYRNNRLKHIL-----PRPLPEPSEAPPPAAAPPLPPAPPVLTP 158
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKE 301
YG+ PGSAL KNDMR++ IDRRKRKK+
Sbjct: 159 VTAAPGPALSPMQYGIPPGSALMKNDMRSSSIDRRKRKKD 198
>gb|EEF05907.2| hypothetical protein POPTR_0015s12240g [Populus trichocarpa]
Length = 205
Score = 81.3 bits (199), Expect = 2e-13
Identities = 46/102 (45%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHIL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 178
PGNKELAHRQQFFFWKNYRNNRLKHIL
Sbjct: 104 PGNKELAHRQQFFFWKNYRNNRLKHILPRPLPEPAAAPPAPAPPPPLPVQPVPPVPAATH 163
Query: 179 XXXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKEV 304
YGM PGSA K+D+R++G +RRKRKKEV
Sbjct: 164 GMLAASGAVPSPMPYGMPPGSAFGKSDIRSSGSERRKRKKEV 205
>ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
[Vitis vinifera] gi|297737389|emb|CBI26590.3| unnamed
protein product [Vitis vinifera]
Length = 198
Score = 80.1 bits (196), Expect = 5e-13
Identities = 45/100 (45%), Positives = 51/100 (51%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
PG+KELAHRQQFF+WKNYRNNRLKHIL
Sbjct: 104 PGSKELAHRQQFFYWKNYRNNRLKHIL------PKPLPEPLAGTPAPGPPPQSAPPTTIA 157
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKE 301
YG+ GS+L+KNDMRN+ IDRRKRKKE
Sbjct: 158 VTSAGSPALSPMQYGIPAGSSLSKNDMRNSAIDRRKRKKE 197
>ref|XP_004166615.1| PREDICTED: mediator of RNA polymerase II transcription subunit
31-like [Cucumis sativus]
Length = 206
Score = 79.7 bits (195), Expect = 6e-13
Identities = 45/100 (45%), Positives = 48/100 (48%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
PGNKELAHRQQF+FWKNYRNNRLKHIL
Sbjct: 105 PGNKELAHRQQFYFWKNYRNNRLKHIL--PRPLPEPAALPPPVTAPPQAAVPAPTSAPNM 162
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKE 301
YG+ PG L KNDM+ AGIDRRKRK E
Sbjct: 163 AASPAAPALSPMQYGIPPGPGLPKNDMKGAGIDRRKRKHE 202
>ref|XP_004146891.1| PREDICTED: mediator of RNA polymerase II transcription subunit
31-like [Cucumis sativus]
Length = 206
Score = 79.7 bits (195), Expect = 6e-13
Identities = 45/100 (45%), Positives = 48/100 (48%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
PGNKELAHRQQF+FWKNYRNNRLKHIL
Sbjct: 105 PGNKELAHRQQFYFWKNYRNNRLKHIL--PRPLPEPAALPPPVTAPPQAAVPAPTSAPNM 162
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKE 301
YG+ PG L KNDM+ AGIDRRKRK E
Sbjct: 163 AASPAAPALSPIQYGIPPGPGLPKNDMKGAGIDRRKRKHE 202
>ref|XP_004307766.1| PREDICTED: mediator of RNA polymerase II transcription subunit
31-like isoform 2 [Fragaria vesca subsp. vesca]
Length = 201
Score = 78.6 bits (192), Expect = 1e-12
Identities = 45/101 (44%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHIL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 178
P NKELAHRQQF+FWKNYR+NRLKHIL
Sbjct: 100 PANKELAHRQQFYFWKNYRHNRLKHILPRPLPEPEAAPPPSAPPLQSLLPAPPVPAATIP 159
Query: 179 XXXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKE 301
Y APGSALAKND RN+ +DRRKRKKE
Sbjct: 160 ATATAPAPALPPMQYANAPGSALAKNDARNSAVDRRKRKKE 200
>gb|EMJ19629.1| hypothetical protein PRUPE_ppa011632mg [Prunus persica]
Length = 200
Score = 77.8 bits (190), Expect = 2e-12
Identities = 45/100 (45%), Positives = 49/100 (49%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
P NKELAHRQQF+FWKNYRNNRLKHIL
Sbjct: 104 PVNKELAHRQQFYFWKNYRNNRLKHIL----PRPLPEPVAAPPTPAPPQQPVPPVPATTV 159
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKE 301
Y PGSALAKN+ RN+G+DRRKRKKE
Sbjct: 160 SVTANAPAPSPMQYVAPPGSALAKNEARNSGVDRRKRKKE 199
>ref|XP_004307765.1| PREDICTED: mediator of RNA polymerase II transcription subunit
31-like isoform 1 [Fragaria vesca subsp. vesca]
Length = 203
Score = 75.9 bits (185), Expect = 9e-12
Identities = 44/102 (43%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHIL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 178
P NKELAHRQQF+FWKNYR+NRLKHIL
Sbjct: 100 PANKELAHRQQFYFWKNYRHNRLKHILPRPLPEPEAAPPPSAPPLQSLLPAPPVPAATIP 159
Query: 179 XXXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKEV 304
Y APGSALAKND RN+ +DRRKRK+ V
Sbjct: 160 ATATAPAPALPPMQYANAPGSALAKNDARNSAVDRRKRKRIV 201
>ref|XP_002321780.1| predicted protein [Populus trichocarpa]
Length = 191
Score = 75.9 bits (185), Expect = 9e-12
Identities = 43/99 (43%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHIL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 178
PGNKELAHRQQFFFWKNYRNNRLKHIL
Sbjct: 93 PGNKELAHRQQFFFWKNYRNNRLKHILPRPLPEPAAAPPAPAPPPPLPVQPVPPVPAATH 152
Query: 179 XXXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRK 295
YGM PGSA K+D+R++G +RRKRK
Sbjct: 153 GMLAASGAVPSPMPYGMPPGSAFGKSDIRSSGSERRKRK 191
>gb|EMJ19630.1| hypothetical protein PRUPE_ppa011632mg [Prunus persica]
Length = 202
Score = 75.5 bits (184), Expect = 1e-11
Identities = 44/101 (43%), Positives = 49/101 (48%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
P NKELAHRQQF+FWKNYRNNRLKHIL
Sbjct: 104 PVNKELAHRQQFYFWKNYRNNRLKHIL----PRPLPEPVAAPPTPAPPQQPVPPVPATTV 159
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKEV 304
Y PGSALAKN+ RN+G+DRRKRK+ V
Sbjct: 160 SVTANAPAPSPMQYVAPPGSALAKNEARNSGVDRRKRKRMV 200
>ref|NP_001235064.1| uncharacterized protein LOC100527879 [Glycine max]
gi|255633448|gb|ACU17082.1| unknown [Glycine max]
Length = 205
Score = 75.5 bits (184), Expect = 1e-11
Identities = 43/101 (42%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHIL--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
P NKELAHRQQF+FWKNYRNNRLKHIL
Sbjct: 105 PTNKELAHRQQFYFWKNYRNNRLKHILPRSLPELSATPAAPASTSSQAPVSALPPVPATS 164
Query: 176 XXXXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKK 298
YGM PGS LAKNDMRN +D RK++K
Sbjct: 165 VAVTATPSQAPSPMPYGMPPGSGLAKNDMRNPTVDNRKKRK 205
>ref|XP_006358189.1| PREDICTED: mediator of RNA polymerase II transcription subunit
31-like isoform X4 [Solanum tuberosum]
Length = 200
Score = 74.7 bits (182), Expect = 2e-11
Identities = 42/100 (42%), Positives = 47/100 (47%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
P NKE+AHRQQF+FWKNYRNNRLKHIL
Sbjct: 101 PANKEVAHRQQFYFWKNYRNNRLKHIL-PRPLPEPATAPSSAPPASLPSSVAPPAAPPLA 159
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKE 301
Y + PGS LAK D RNA +DRRKRKK+
Sbjct: 160 PTPVTAAALSPMQYAIPPGSGLAKTDPRNASVDRRKRKKD 199
>ref|XP_004235202.1| PREDICTED: mediator of RNA polymerase II transcription subunit
31-like [Solanum lycopersicum]
Length = 200
Score = 74.7 bits (182), Expect = 2e-11
Identities = 42/100 (42%), Positives = 47/100 (47%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
P NKE+AHRQQF+FWKNYRNNRLKHIL
Sbjct: 101 PANKEVAHRQQFYFWKNYRNNRLKHIL-PRPLPEPATAPSSAPPASLPSSVAPPTAPPPA 159
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKE 301
Y + PGS LAK D RNA +DRRKRKK+
Sbjct: 160 PTPVTAAALSPMQYAIPPGSGLAKTDPRNASVDRRKRKKD 199
>ref|XP_002339509.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 73.9 bits (180), Expect = 3e-11
Identities = 43/98 (43%), Positives = 46/98 (46%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
PGNKELAHRQQFFFWKNYRNNRLKHIL
Sbjct: 88 PGNKELAHRQQFFFWKNYRNNRLKHILPRPLPEPVTAPPALAPPPQTPVQPVPPVSAATL 147
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRK 295
M PGSA K+D+RN+G DRRKRK
Sbjct: 148 GMPAAPGAVPLP---MPPGSAFGKSDIRNSGSDRRKRK 182
>gb|ESW15321.1| hypothetical protein PHAVU_007G063000g [Phaseolus vulgaris]
Length = 207
Score = 73.6 bits (179), Expect = 4e-11
Identities = 42/103 (40%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHI----LXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 169
P NKELAHRQQF+FWKNYRNNRLKHI L
Sbjct: 105 PTNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPSATSAVPAPVSTTTQAPVSALPPVPA 164
Query: 170 XXXXXXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKK 298
YGM PGS LAKNDMRN +D R+++K
Sbjct: 165 TSVAVTSTPAQAPSPMPYGMPPGSGLAKNDMRNPTVDNRRKRK 207
>gb|AFK36513.1| unknown [Medicago truncatula]
Length = 204
Score = 73.6 bits (179), Expect = 4e-11
Identities = 42/100 (42%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHIL--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
P NKEL HRQQF+FWKNYRNNRLKHIL
Sbjct: 105 PTNKELTHRQQFYFWKNYRNNRLKHILPRSLAEPSAALPAPASTQPQPPVPALPPVPATS 164
Query: 176 XXXXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRK 295
YG+ PGS +AKNDMRN DRRKRK
Sbjct: 165 VAVTTSSSQAPSPMPYGIPPGSGIAKNDMRNTSADRRKRK 204
>gb|AFK35607.1| unknown [Lotus japonicus]
Length = 206
Score = 73.2 bits (178), Expect = 6e-11
Identities = 42/102 (41%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHI----LXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 169
P NKELAHRQQF+FWKNYRNNRLKHI L
Sbjct: 105 PNNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPSATPALPAPASTPIQPPVPALPPAPA 164
Query: 170 XXXXXXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRK 295
YG+ PGS LAK+DMRN +DRR+RK
Sbjct: 165 TNVAVTASSAQAPSPMPYGIPPGSGLAKSDMRNPTVDRRRRK 206
>gb|ERP54748.1| hypothetical protein POPTR_0012s11490g, partial [Populus
trichocarpa]
Length = 197
Score = 72.0 bits (175), Expect = 1e-10
Identities = 42/97 (43%), Positives = 45/97 (46%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
PGNKELAHRQQFFFWKNYRNNRLKHIL
Sbjct: 104 PGNKELAHRQQFFFWKNYRNNRLKHILPRPLPEPVTAPPALAPPPQTPVQPVPPVSAATL 163
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKR 292
M PGSA K+D+RN+G DRRKR
Sbjct: 164 GMPAAPGAVPLP---MPPGSAFGKSDIRNSGSDRRKR 197
>ref|XP_006358186.1| PREDICTED: mediator of RNA polymerase II transcription subunit
31-like isoform X1 [Solanum tuberosum]
gi|565384528|ref|XP_006358187.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 31-like isoform
X2 [Solanum tuberosum] gi|565384530|ref|XP_006358188.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 31-like isoform X3 [Solanum tuberosum]
Length = 201
Score = 71.2 bits (173), Expect = 2e-10
Identities = 40/100 (40%), Positives = 46/100 (46%)
Frame = +2
Query: 2 PGNKELAHRQQFFFWKNYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
P NKE+AHRQQF+FWKNYRNNRLKHIL
Sbjct: 101 PANKEVAHRQQFYFWKNYRNNRLKHIL-PRPLPEPATAPSSAPPASLPSSVAPPAAPPLA 159
Query: 182 XXXXXXXXXXXXXYGMAPGSALAKNDMRNAGIDRRKRKKE 301
Y + PGS LAK D RNA +DRRKR ++
Sbjct: 160 PTPVTAAALSPMQYAIPPGSGLAKTDPRNASVDRRKRNRK 199