BLASTX nr result

ID: Jatropha_contig00030178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00030178
         (676 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE78346.2| hypothetical protein POPTR_0003s07860g [Populus t...    61   3e-07
ref|XP_002303367.1| predicted protein [Populus trichocarpa]            61   3e-07

>gb|EEE78346.2| hypothetical protein POPTR_0003s07860g [Populus trichocarpa]
          Length = 547

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = +3

Query: 396 SVCVLVLLSEPPHIGNWYSSYMYESPVLETTVDDYXXXXXXXXXXXXXGFDYEGSKRKRE 575
           S+C L LLSEPP I NW+ SY YESPVL+ T + +             GF  E SK +RE
Sbjct: 104 SLCSLSLLSEPPDIRNWFPSYEYESPVLD-TAEYFIESVIKESEGENDGFAIEESKNRRE 162

Query: 576 DNFDKSKNSFEDTEV---DKPSN 635
           +N     NS  + EV   +KPS+
Sbjct: 163 ENAGDLSNSGNNNEVRANEKPSS 185


>ref|XP_002303367.1| predicted protein [Populus trichocarpa]
          Length = 547

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = +3

Query: 396 SVCVLVLLSEPPHIGNWYSSYMYESPVLETTVDDYXXXXXXXXXXXXXGFDYEGSKRKRE 575
           S+C L LLSEPP I NW+ SY YESPVL+ T + +             GF  E SK +RE
Sbjct: 104 SLCSLSLLSEPPDIRNWFPSYEYESPVLD-TAEYFIESVIKESEGENDGFAIEESKNRRE 162

Query: 576 DNFDKSKNSFEDTEV---DKPSN 635
           +N     NS  + EV   +KPS+
Sbjct: 163 ENAGDLSNSGNNNEVRANEKPSS 185


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