BLASTX nr result

ID: Jatropha_contig00030152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00030152
         (602 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus com...   151   1e-34
ref|XP_002312205.1| predicted protein [Populus trichocarpa] gi|2...   122   5e-26
gb|EEF01283.2| hypothetical protein POPTR_0010s18580g [Populus t...   108   8e-22
gb|EEF01282.2| hypothetical protein POPTR_0010s18580g [Populus t...   108   8e-22
emb|CBI23350.3| unnamed protein product [Vitis vinifera]               68   2e-09

>ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223545825|gb|EEF47328.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 1247

 Score =  151 bits (381), Expect = 1e-34
 Identities = 91/195 (46%), Positives = 117/195 (60%)
 Frame = +1

Query: 1   SDLPHRGGTMHLSLGDQLNHDNIMCTPAEENSHFSGDLEINQSGLGGDFHSNSVATEHIL 180
           S L H      LSL D L+HD I   P EE+S  SGDLEINQ+GL G+  S +V +EH  
Sbjct: 293 SALHHGDDARDLSLVDHLSHDTIAYMPTEEHSRLSGDLEINQAGLEGELLSTAVTSEHGP 352

Query: 181 ANGTVDTLDGLDKVEDTDKVVSCNNEQTCSPVDQINGEYEESIGVRLQETEKVETAYKME 360
           A+ TV   D   ++ED +KVVS +N +T + +DQING+YEES    L ET   + + K+ 
Sbjct: 353 ADETVSRQDESHQIEDKNKVVSSDNGETVTSIDQINGDYEES----LAETNDNKFSNKIG 408

Query: 361 ESNLNGKNLASNNVNSLESPIGSECINVEGQSFQAQGKPETLNGHLNNQQMAPACTVLLR 540
           E  LNGK +A    +S   P   E +NVEGQ  Q Q   ETL  H+NN+QM P C  +L 
Sbjct: 409 ECLLNGK-VAPMPAHSSGLPTALETVNVEGQDGQGQEDSETLLDHVNNEQMKPTCISVLL 467

Query: 541 ACNSNLSQTDMPSCE 585
            CNS+LSQ D+ S E
Sbjct: 468 PCNSHLSQPDILSGE 482


>ref|XP_002312205.1| predicted protein [Populus trichocarpa] gi|222852025|gb|EEE89572.1|
           hypothetical protein POPTR_0008s07790g [Populus
           trichocarpa]
          Length = 1208

 Score =  122 bits (307), Expect = 5e-26
 Identities = 78/194 (40%), Positives = 111/194 (57%)
 Frame = +1

Query: 13  HRGGTMHLSLGDQLNHDNIMCTPAEENSHFSGDLEINQSGLGGDFHSNSVATEHILANGT 192
           HR  TM+LSLG+ LN D ++C PAEEN   SGDLEINQ+   G+  S +V  +++ A+G 
Sbjct: 289 HRDDTMNLSLGNHLNCDTVVCIPAEENGCLSGDLEINQAESPGELLSTTVNIDYLAADGM 348

Query: 193 VDTLDGLDKVEDTDKVVSCNNEQTCSPVDQINGEYEESIGVRLQETEKVETAYKMEESNL 372
           V  LDG D VE  +  V CN E T   VD+INGE  ES GVRL E + +E A  +E+ + 
Sbjct: 349 VCALDGSDNVEVINNFV-CNGEVTVPSVDKINGECRESTGVRLHEPDNLEIANAVEDLSS 407

Query: 373 NGKNLASNNVNSLESPIGSECINVEGQSFQAQGKPETLNGHLNNQQMAPACTVLLRACNS 552
            GK + +N    LE     E    + Q+ Q    P++L+  ++ ++   +  V LRACNS
Sbjct: 408 LGKAVDANTGCPLELAGAPE---GDAQAHQGPEDPDSLSKDVDGEKTHNSMGV-LRACNS 463

Query: 553 NLSQTDMPSCEVSN 594
            +S  D     ++N
Sbjct: 464 YMSGPDSSFHGINN 477


>gb|EEF01283.2| hypothetical protein POPTR_0010s18580g [Populus trichocarpa]
          Length = 1052

 Score =  108 bits (271), Expect = 8e-22
 Identities = 73/197 (37%), Positives = 110/197 (55%)
 Frame = +1

Query: 4   DLPHRGGTMHLSLGDQLNHDNIMCTPAEENSHFSGDLEINQSGLGGDFHSNSVATEHILA 183
           DL  R GTM+LS G+ LN+D ++C PAEEN   SGDLEINQ+   G+  S +      LA
Sbjct: 130 DLHQRDGTMNLSPGNHLNYDTVVCMPAEENGCLSGDLEINQAKSQGELQSTA------LA 183

Query: 184 NGTVDTLDGLDKVEDTDKVVSCNNEQTCSPVDQINGEYEESIGVRLQETEKVETAYKMEE 363
           +GT+  LDG DK+E  + VV       CS          ES GVRL E +  E  Y +E+
Sbjct: 184 DGTICALDGSDKLEVINNVVC-----KCS----------ESTGVRLYEPDNFEITYAVED 228

Query: 364 SNLNGKNLASNNVNSLESPIGSECINVEGQSFQAQGKPETLNGHLNNQQMAPACTVLLRA 543
            +  GK + +++   LE     E +    Q+ +    P+TLN +++N+++  +   +LRA
Sbjct: 229 LSSLGKTVDASSGCPLELAGAPEDV---AQACEGPEDPDTLNKNVDNEKIHTSMG-MLRA 284

Query: 544 CNSNLSQTDMPSCEVSN 594
           CNS+L++ D  S  ++N
Sbjct: 285 CNSHLNEPDSSSHGINN 301


>gb|EEF01282.2| hypothetical protein POPTR_0010s18580g [Populus trichocarpa]
          Length = 953

 Score =  108 bits (271), Expect = 8e-22
 Identities = 73/197 (37%), Positives = 110/197 (55%)
 Frame = +1

Query: 4   DLPHRGGTMHLSLGDQLNHDNIMCTPAEENSHFSGDLEINQSGLGGDFHSNSVATEHILA 183
           DL  R GTM+LS G+ LN+D ++C PAEEN   SGDLEINQ+   G+  S +      LA
Sbjct: 130 DLHQRDGTMNLSPGNHLNYDTVVCMPAEENGCLSGDLEINQAKSQGELQSTA------LA 183

Query: 184 NGTVDTLDGLDKVEDTDKVVSCNNEQTCSPVDQINGEYEESIGVRLQETEKVETAYKMEE 363
           +GT+  LDG DK+E  + VV       CS          ES GVRL E +  E  Y +E+
Sbjct: 184 DGTICALDGSDKLEVINNVVC-----KCS----------ESTGVRLYEPDNFEITYAVED 228

Query: 364 SNLNGKNLASNNVNSLESPIGSECINVEGQSFQAQGKPETLNGHLNNQQMAPACTVLLRA 543
            +  GK + +++   LE     E +    Q+ +    P+TLN +++N+++  +   +LRA
Sbjct: 229 LSSLGKTVDASSGCPLELAGAPEDV---AQACEGPEDPDTLNKNVDNEKIHTSMG-MLRA 284

Query: 544 CNSNLSQTDMPSCEVSN 594
           CNS+L++ D  S  ++N
Sbjct: 285 CNSHLNEPDSSSHGINN 301


>emb|CBI23350.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 9/190 (4%)
 Frame = +1

Query: 37  SLGDQLNHDNIMCTPAEENSHFSGDLEINQSGLGGDFHSNSVATEHILAN---GTVDTLD 207
           +L +  NHD ++  PA+EN +  G+ +I Q+   GD  S +V T+ I +    G     D
Sbjct: 305 TLLNDTNHDAVLSIPADENGYLLGEQKIKQAKPQGDSPSVAV-TDQISSECSVGKAAAPD 363

Query: 208 GLDKVEDTDKVVSCNNEQTCSPVDQINGEYEESIGVRLQETEKVETAYKMEESNLNGKNL 387
           G D+ ED       N+      VDQ + E+EE  G  L ET               G  +
Sbjct: 364 GKDRAEDMQNGTLSNHGPGILSVDQTHEEFEEPHG--LDETV--------------GNPI 407

Query: 388 ASNNVNSLESPIGSECINVEGQSFQAQGKPETLN------GHLNNQQMAPACTVLLRACN 549
            S+  + LE P   E  N    S+++ G+P   N        + +++M P    +++ACN
Sbjct: 408 FSHAASDLEDPCHRESSNA-ACSYESPGRPHLENVEAQALNSVVHEEMPPCSVDVVQACN 466

Query: 550 SNLSQTDMPS 579
           S+L+QTD+ S
Sbjct: 467 SHLNQTDLSS 476


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