BLASTX nr result

ID: Jatropha_contig00030106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00030106
         (177 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512475.1| Eukaryotic translation initiation factor 3 s...    70   4e-10
gb|ERP60232.1| hypothetical protein POPTR_0005s02130g [Populus t...    61   2e-07
gb|EEE94885.2| hypothetical protein POPTR_0013s01330g [Populus t...    61   2e-07
ref|XP_002330181.1| predicted protein [Populus trichocarpa]            61   2e-07
gb|ESR46727.1| hypothetical protein CICLE_v10000154mg [Citrus cl...    60   2e-07

>ref|XP_002512475.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223548436|gb|EEF49927.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 994

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/58 (65%), Positives = 38/58 (65%)
 Frame = +3

Query: 3   QRKNXXXXXXXXXXXXXXXXXXXXDVDKRSKRKGGKKPILEGEKVTKQTIMERALSEQ 176
           QRKN                    DVDKRSKRKGGKKPILEGEKVTKQTIMERALSEQ
Sbjct: 614 QRKNQRILQEIEQRELEEAQALLEDVDKRSKRKGGKKPILEGEKVTKQTIMERALSEQ 671


>gb|ERP60232.1| hypothetical protein POPTR_0005s02130g [Populus trichocarpa]
          Length = 972

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +3

Query: 81  DKRSKRKGGKKPILEGEKVTKQTIMERALSEQ 176
           +KRSKRKGGKKPILEGEKVTKQ +MERALSEQ
Sbjct: 640 EKRSKRKGGKKPILEGEKVTKQILMERALSEQ 671


>gb|EEE94885.2| hypothetical protein POPTR_0013s01330g [Populus trichocarpa]
          Length = 995

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +3

Query: 81  DKRSKRKGGKKPILEGEKVTKQTIMERALSEQ 176
           +KRSKRKGGKKPILEGEKVTKQ +MERALSEQ
Sbjct: 646 EKRSKRKGGKKPILEGEKVTKQILMERALSEQ 677


>ref|XP_002330181.1| predicted protein [Populus trichocarpa]
          Length = 972

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +3

Query: 81  DKRSKRKGGKKPILEGEKVTKQTIMERALSEQ 176
           +KRSKRKGGKKPILEGEKVTKQ +MERALSEQ
Sbjct: 640 EKRSKRKGGKKPILEGEKVTKQILMERALSEQ 671


>gb|ESR46727.1| hypothetical protein CICLE_v10000154mg [Citrus clementina]
          Length = 987

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/34 (79%), Positives = 33/34 (97%)
 Frame = +3

Query: 75  DVDKRSKRKGGKKPILEGEKVTKQTIMERALSEQ 176
           + +KR+K+KGGKKPILEGEKVTKQT+MERAL+EQ
Sbjct: 638 EAEKRNKKKGGKKPILEGEKVTKQTLMERALTEQ 671


Top