BLASTX nr result
ID: Jatropha_contig00030063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00030063
(672 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]... 124 2e-26
ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi... 110 4e-22
emb|CBI37849.3| unnamed protein product [Vitis vinifera] 110 4e-22
gb|EEE86704.2| hypothetical protein POPTR_0004s18320g [Populus t... 108 1e-21
gb|EMJ02383.1| hypothetical protein PRUPE_ppa003064mg [Prunus pe... 108 1e-21
gb|EEE86903.2| hypothetical protein POPTR_0009s13940g [Populus t... 103 6e-20
ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Frag... 101 2e-19
gb|EOX97615.1| Splicing factor isoform 3 [Theobroma cacao] 96 1e-17
gb|EOX97613.1| Splicing factor isoform 1 [Theobroma cacao] gi|50... 96 1e-17
ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cice... 94 4e-17
gb|ESR35772.1| hypothetical protein CICLE_v10027985mg [Citrus cl... 90 7e-16
gb|ESR35771.1| hypothetical protein CICLE_v10027985mg [Citrus cl... 90 7e-16
gb|ESW14802.1| hypothetical protein PHAVU_007G018500g [Phaseolus... 84 5e-14
gb|ESQ50823.1| hypothetical protein EUTSA_v10022624mg [Eutrema s... 80 4e-13
ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Caps... 76 1e-11
ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arab... 75 1e-11
ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidops... 75 2e-11
ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidops... 75 2e-11
gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana] 75 2e-11
ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis ... 75 2e-11
>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative
[Ricinus communis]
Length = 609
Score = 124 bits (311), Expect = 2e-26
Identities = 57/74 (77%), Positives = 66/74 (89%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 361
M+FDEY+YLEKTVENPE HK KE ANGGD +MK+GEK+SSRSSKH+ +EKDDGDDD+ RS
Sbjct: 1 MDFDEYEYLEKTVENPEPHKTKEAANGGDGAMKSGEKDSSRSSKHRSNEKDDGDDDNRRS 60
Query: 362 KRSKSGDESRDHDR 403
KR KSGDESRD D+
Sbjct: 61 KRPKSGDESRDPDQ 74
>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 110 bits (275), Expect = 4e-22
Identities = 53/74 (71%), Positives = 62/74 (83%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 361
M+FDEYDYLEKTVENPE+ K KET NGGD+++K+GEKE SRSSKHK +D+ DD R
Sbjct: 1 MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHK--SEDNDDDLDRRL 58
Query: 362 KRSKSGDESRDHDR 403
KRSKSGD+SRDHDR
Sbjct: 59 KRSKSGDDSRDHDR 72
>emb|CBI37849.3| unnamed protein product [Vitis vinifera]
Length = 228
Score = 110 bits (275), Expect = 4e-22
Identities = 53/74 (71%), Positives = 62/74 (83%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 361
M+FDEYDYLEKTVENPE+ K KET NGGD+++K+GEKE SRSSKHK +D+ DD R
Sbjct: 1 MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHK--SEDNDDDLDRRL 58
Query: 362 KRSKSGDESRDHDR 403
KRSKSGD+SRDHDR
Sbjct: 59 KRSKSGDDSRDHDR 72
>gb|EEE86704.2| hypothetical protein POPTR_0004s18320g [Populus trichocarpa]
Length = 609
Score = 108 bits (271), Expect = 1e-21
Identities = 55/75 (73%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEKDDG-DDDHHR 358
MEFDEYDYLEKTVEN E KAKETANGGDD +K+ EK+ SRSSKH+ EKD G DD+ R
Sbjct: 1 MEFDEYDYLEKTVENLEPPKAKETANGGDDKVKSREKDRSRSSKHRSDEKDLGNDDERSR 60
Query: 359 SKRSKSGDESRDHDR 403
SKRS+SGDESRD +R
Sbjct: 61 SKRSRSGDESRDRER 75
>gb|EMJ02383.1| hypothetical protein PRUPE_ppa003064mg [Prunus persica]
Length = 607
Score = 108 bits (270), Expect = 1e-21
Identities = 54/77 (70%), Positives = 63/77 (81%), Gaps = 2/77 (2%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 361
M+FDEY+YLEKTVENPE KAKETANGG++++K+GEK SRSSKHK EK G D+ S
Sbjct: 1 MDFDEYEYLEKTVENPEPQKAKETANGGEETLKSGEKGRSRSSKHKSDEK--GHDEERHS 58
Query: 362 KRSKSGDESR--DHDRH 406
KRSKSGD+SR DHDRH
Sbjct: 59 KRSKSGDDSREHDHDRH 75
>gb|EEE86903.2| hypothetical protein POPTR_0009s13940g [Populus trichocarpa]
Length = 599
Score = 103 bits (256), Expect = 6e-20
Identities = 48/74 (64%), Positives = 59/74 (79%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 361
MEFDEYDYLEKTVENPE K +ETANG D +K+ EK+ RSSK + +KDDGDD+ RS
Sbjct: 1 MEFDEYDYLEKTVENPEPPKVRETANGEGDIVKSREKDRLRSSKRRSDDKDDGDDERRRS 60
Query: 362 KRSKSGDESRDHDR 403
K+S+SGDE+RD +R
Sbjct: 61 KQSRSGDENRDRER 74
>ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Fragaria vesca subsp.
vesca]
Length = 588
Score = 101 bits (251), Expect = 2e-19
Identities = 49/74 (66%), Positives = 58/74 (78%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 361
M+FDEYDYLEKTVENPE +KE ANGGD+++K+G+K SRSSKH+ +KD D RS
Sbjct: 1 MDFDEYDYLEKTVENPEPLASKENANGGDETLKSGDKGRSRSSKHRSDDKD--HDGERRS 58
Query: 362 KRSKSGDESRDHDR 403
KRSKSGDE DHDR
Sbjct: 59 KRSKSGDELHDHDR 72
>gb|EOX97615.1| Splicing factor isoform 3 [Theobroma cacao]
Length = 545
Score = 95.5 bits (236), Expect = 1e-17
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEK-DDGDDDHHR 358
M+FDEY+YLEKTVEN E KAKE NGG DS+K+ E+ SRSSKHK E+ DD +++H R
Sbjct: 1 MDFDEYEYLEKTVENTEPQKAKEDGNGGIDSVKSEERNRSRSSKHKREERADDYENEHRR 60
Query: 359 SKRSKSGDE-SRDHDRH 406
SKRSKS +E SRD DRH
Sbjct: 61 SKRSKSREESSRDLDRH 77
>gb|EOX97613.1| Splicing factor isoform 1 [Theobroma cacao]
gi|508705718|gb|EOX97614.1| Splicing factor isoform 1
[Theobroma cacao]
Length = 581
Score = 95.5 bits (236), Expect = 1e-17
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEK-DDGDDDHHR 358
M+FDEY+YLEKTVEN E KAKE NGG DS+K+ E+ SRSSKHK E+ DD +++H R
Sbjct: 1 MDFDEYEYLEKTVENTEPQKAKEDGNGGIDSVKSEERNRSRSSKHKREERADDYENEHRR 60
Query: 359 SKRSKSGDE-SRDHDRH 406
SKRSKS +E SRD DRH
Sbjct: 61 SKRSKSREESSRDLDRH 77
>ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cicer arietinum]
Length = 613
Score = 94.0 bits (232), Expect = 4e-17
Identities = 48/74 (64%), Positives = 57/74 (77%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 361
M+FDEY+YLEKTVEN E KET NGGD ++K+ ++ SRSSKHK SEKDDGD D H
Sbjct: 1 MDFDEYEYLEKTVENSEFKNQKETTNGGDRTVKSEDRGRSRSSKHKDSEKDDGDVD-HCL 59
Query: 362 KRSKSGDESRDHDR 403
K+SKSGD SR +DR
Sbjct: 60 KQSKSGDVSRGYDR 73
>gb|ESR35772.1| hypothetical protein CICLE_v10027985mg [Citrus clementina]
Length = 639
Score = 89.7 bits (221), Expect = 7e-16
Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEK-DDGDDDHHR 358
M+FDEY+YLEK VENPE K KETAN GD ++K+ ++ SRSSK K EK +D DDD HR
Sbjct: 1 MDFDEYEYLEKMVENPEPAKEKETAN-GDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHR 59
Query: 359 SKRSKSGDESRDHDR 403
S+ SKS DESR+HDR
Sbjct: 60 SRGSKSRDESRNHDR 74
>gb|ESR35771.1| hypothetical protein CICLE_v10027985mg [Citrus clementina]
Length = 647
Score = 89.7 bits (221), Expect = 7e-16
Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEK-DDGDDDHHR 358
M+FDEY+YLEK VENPE K KETAN GD ++K+ ++ SRSSK K EK +D DDD HR
Sbjct: 1 MDFDEYEYLEKMVENPEPAKEKETAN-GDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHR 59
Query: 359 SKRSKSGDESRDHDR 403
S+ SKS DESR+HDR
Sbjct: 60 SRGSKSRDESRNHDR 74
>gb|ESW14802.1| hypothetical protein PHAVU_007G018500g [Phaseolus vulgaris]
Length = 603
Score = 83.6 bits (205), Expect = 5e-14
Identities = 42/74 (56%), Positives = 52/74 (70%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 361
M+FDEY+YLEKTVEN E K K NG D S+K+ E+ R+SK K EKDD D + H S
Sbjct: 1 MDFDEYEYLEKTVENAEVKKEKHRINGSDRSVKSEERGHGRNSKRKSDEKDDDDVEFH-S 59
Query: 362 KRSKSGDESRDHDR 403
K SKSGD+SR ++R
Sbjct: 60 KHSKSGDDSRHYER 73
>gb|ESQ50823.1| hypothetical protein EUTSA_v10022624mg [Eutrema salsugineum]
Length = 566
Score = 80.5 bits (197), Expect = 4e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGG-DDSMKTGEKESSRSSKHKISEKDDGDDDHHR 358
M+FDEY+YLEKTVENP H E NGG D+ K KE SRSS+H+ EK D D+D R
Sbjct: 1 MDFDEYEYLEKTVENP--HLENEVGNGGGDEKAKPEVKERSRSSRHRSDEKRDEDEDGRR 58
Query: 359 SKRSKSGDESRDHDR 403
SKRS+S SR DR
Sbjct: 59 SKRSRSHHRSRSRDR 73
>ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Capsella rubella]
gi|482568547|gb|EOA32736.1| hypothetical protein
CARUB_v10016041mg [Capsella rubella]
Length = 550
Score = 75.9 bits (185), Expect = 1e-11
Identities = 40/75 (53%), Positives = 49/75 (65%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETANGGDDSMKTGEKESSRSSKHKISEKDDGDDDHHRS 361
M+FDEY+YLEKTVENP E NGGD+ K+ KE SRSS+H + D D++ RS
Sbjct: 1 MDFDEYEYLEKTVENPLLEN--EVVNGGDEKAKSEGKERSRSSRH----RSDEDEEGRRS 54
Query: 362 KRSKSGDESRDHDRH 406
KRS+S SR DRH
Sbjct: 55 KRSRSHHRSRSRDRH 69
>ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata] gi|297331927|gb|EFH62346.1| hypothetical protein
ARALYDRAFT_480573 [Arabidopsis lyrata subsp. lyrata]
Length = 557
Score = 75.5 bits (184), Expect = 1e-11
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETAN-GGDDSMKTGEKESSRSSKHKISEKD--DGDDDH 352
M+FDEY+YLEKTVENP H E N GGD+ +K+ +E SRSS+H+ EK D D+D
Sbjct: 1 MDFDEYEYLEKTVENP--HLENEVGNGGGDEKVKSEGRERSRSSRHRGDEKKERDEDEDG 58
Query: 353 HRSKRSKSGDESRDHDR 403
RSKRS+S SR DR
Sbjct: 59 RRSKRSRSHHRSRSRDR 75
>ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 610
Score = 75.1 bits (183), Expect = 2e-11
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETAN-GGDDSMKTGEKESSRSSKHKISEKD--DGDDDH 352
M+FDEY+YLEKTVENP H E N GGD+ +K+ KE SRSS+H+ +K D D+D
Sbjct: 1 MDFDEYEYLEKTVENP--HLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 58
Query: 353 HRSKRSKSGDESRDHDR 403
RSKRS+S SR DR
Sbjct: 59 RRSKRSRSHHRSRSRDR 75
>ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 599
Score = 75.1 bits (183), Expect = 2e-11
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETAN-GGDDSMKTGEKESSRSSKHKISEKD--DGDDDH 352
M+FDEY+YLEKTVENP H E N GGD+ +K+ KE SRSS+H+ +K D D+D
Sbjct: 1 MDFDEYEYLEKTVENP--HLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 58
Query: 353 HRSKRSKSGDESRDHDR 403
RSKRS+S SR DR
Sbjct: 59 RRSKRSRSHHRSRSRDR 75
>gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 75.1 bits (183), Expect = 2e-11
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETAN-GGDDSMKTGEKESSRSSKHKISEKD--DGDDDH 352
M+FDEY+YLEKTVENP H E N GGD+ +K+ KE SRSS+H+ +K D D+D
Sbjct: 1 MDFDEYEYLEKTVENP--HLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 58
Query: 353 HRSKRSKSGDESRDHDR 403
RSKRS+S SR DR
Sbjct: 59 RRSKRSRSHHRSRSRDR 75
>ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor
[Arabidopsis thaliana] gi|133778824|gb|ABO38752.1|
At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 561
Score = 75.1 bits (183), Expect = 2e-11
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Frame = +2
Query: 182 MEFDEYDYLEKTVENPEAHKAKETAN-GGDDSMKTGEKESSRSSKHKISEKD--DGDDDH 352
M+FDEY+YLEKTVENP H E N GGD+ +K+ KE SRSS+H+ +K D D+D
Sbjct: 1 MDFDEYEYLEKTVENP--HLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 58
Query: 353 HRSKRSKSGDESRDHDR 403
RSKRS+S SR DR
Sbjct: 59 RRSKRSRSHHRSRSRDR 75