BLASTX nr result
ID: Jatropha_contig00029953
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00029953
(704 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago t... 87 4e-27
dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne] 87 5e-25
ref|XP_004507449.1| PREDICTED: glycine-rich RNA-binding protein ... 89 8e-25
ref|XP_004507450.1| PREDICTED: glycine-rich RNA-binding protein ... 89 8e-25
dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Diant... 84 1e-24
dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza] 115 2e-23
gb|AFK35888.1| unknown [Medicago truncatula] 72 3e-22
ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [... 98 2e-18
emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis] 98 2e-18
ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299... 97 6e-18
ref|XP_006339763.1| PREDICTED: glycine-rich RNA-binding protein ... 95 2e-17
gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus... 95 2e-17
gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x... 94 3e-17
gb|ERP62303.1| hypothetical protein POPTR_0004s16260g [Populus t... 94 4e-17
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu] 94 4e-17
ref|XP_002305429.1| predicted protein [Populus trichocarpa] gi|1... 94 4e-17
dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare] 61 4e-17
gb|EMT32326.1| Glycine-rich RNA-binding protein [Aegilops tauschii] 61 4e-17
dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare] 61 4e-17
ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299... 93 7e-17
>ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding
protein [Medicago truncatula]
Length = 190
Score = 87.0 bits (214), Expect(2) = 4e-27
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = +2
Query: 236 FFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
F +T+ K +INDRETGRSRGFGFVTF EKSMRDAIE MNGQ++DGRNITVNEAQ
Sbjct: 31 FGEITDSK-VINDRETGRSRGFGFVTFAEEKSMRDAIEEMNGQDIDGRNITVNEAQ 85
Score = 61.2 bits (147), Expect(2) = 4e-27
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +3
Query: 18 MASAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
M S+++EYRCFVGGLAWAT QAL +AFS +G+I +SKV
Sbjct: 1 MGSSDVEYRCFVGGLAWATDSQALEQAFSKFGEITDSKV 39
>dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 86.7 bits (213), Expect(2) = 5e-25
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = +2
Query: 236 FFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
F +T+ K IINDRETGRSRGFGFVTF++ +SM++AIEGMNGQ+LDGRNITVNEAQ
Sbjct: 28 FGEITDCK-IINDRETGRSRGFGFVTFSSSESMKNAIEGMNGQDLDGRNITVNEAQ 82
Score = 54.7 bits (130), Expect(2) = 5e-25
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +3
Query: 36 EYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
EYRCFVGGLAWAT DQ+L +AFS +G+I + K+
Sbjct: 4 EYRCFVGGLAWATNDQSLEQAFSQFGEITDCKI 36
>ref|XP_004507449.1| PREDICTED: glycine-rich RNA-binding protein GRP2A-like isoform X1
[Cicer arietinum]
Length = 166
Score = 89.4 bits (220), Expect(2) = 8e-25
Identities = 44/53 (83%), Positives = 50/53 (94%)
Frame = +2
Query: 245 VTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
VT+ K +INDRETGRSRGFGFVTF+ E+SMRDAIEGMNGQ++DGRNITVNEAQ
Sbjct: 34 VTDSK-VINDRETGRSRGFGFVTFSTEQSMRDAIEGMNGQDVDGRNITVNEAQ 85
Score = 51.2 bits (121), Expect(2) = 8e-25
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 18 MASAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
MAS+ +EYRCFVGGLA AL +AFS+YG++ +SKV
Sbjct: 1 MASSAVEYRCFVGGLAGPPDSDALAKAFSSYGEVTDSKV 39
>ref|XP_004507450.1| PREDICTED: glycine-rich RNA-binding protein GRP2A-like isoform X2
[Cicer arietinum]
Length = 152
Score = 89.4 bits (220), Expect(2) = 8e-25
Identities = 44/53 (83%), Positives = 50/53 (94%)
Frame = +2
Query: 245 VTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
VT+ K +INDRETGRSRGFGFVTF+ E+SMRDAIEGMNGQ++DGRNITVNEAQ
Sbjct: 34 VTDSK-VINDRETGRSRGFGFVTFSTEQSMRDAIEGMNGQDVDGRNITVNEAQ 85
Score = 51.2 bits (121), Expect(2) = 8e-25
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 18 MASAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
MAS+ +EYRCFVGGLA AL +AFS+YG++ +SKV
Sbjct: 1 MASSAVEYRCFVGGLAGPPDSDALAKAFSSYGEVTDSKV 39
>dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 84.3 bits (207), Expect(2) = 1e-24
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = +2
Query: 236 FFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
F VT+ K IINDRETGRSRGFGFVTF NE+SMRDAI+ MNG+ LDGR+ITVNEAQ
Sbjct: 29 FGEVTDSK-IINDRETGRSRGFGFVTFANEQSMRDAIDEMNGKELDGRSITVNEAQ 83
Score = 55.5 bits (132), Expect(2) = 1e-24
Identities = 21/36 (58%), Positives = 31/36 (86%)
Frame = +3
Query: 27 AEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
AE+EYRCFVGGL+W T D++L EAF+ +G++ +SK+
Sbjct: 2 AEVEYRCFVGGLSWGTDDRSLAEAFNKFGEVTDSKI 37
>dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza]
Length = 163
Score = 115 bits (287), Expect = 2e-23
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +2
Query: 203 ICLCYYISVLLFFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN 382
+C+ + FYVTNL+SIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN
Sbjct: 22 VCVTIICVTTVLFYVTNLQSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN 81
Query: 383 ITVNEAQ 403
ITVNEAQ
Sbjct: 82 ITVNEAQ 88
>gb|AFK35888.1| unknown [Medicago truncatula]
Length = 92
Score = 72.0 bits (175), Expect(2) = 3e-22
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +2
Query: 236 FFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGR 379
F +T+ K +INDRETGRSRGFGFVTF EKSMRDAIE MNGQ++DGR
Sbjct: 31 FGEITDSK-VINDRETGRSRGFGFVTFAEEKSMRDAIEEMNGQDIDGR 77
Score = 59.7 bits (143), Expect(2) = 3e-22
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 18 MASAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
M S+++EYRCFVGGLAWAT +AL +AFS +G+I +SKV
Sbjct: 1 MGSSDVEYRCFVGGLAWATDSRALEQAFSKFGEITDSKV 39
>ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 166
Score = 98.2 bits (243), Expect = 2e-18
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2
Query: 263 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
Score = 71.6 bits (174), Expect = 2e-10
Identities = 31/39 (79%), Positives = 38/39 (97%)
Frame = +3
Query: 18 MASAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
MA+A+IEYRCFVGGLAWAT+D+AL EAFSAYG++LESK+
Sbjct: 1 MAAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKI 39
>emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 98.2 bits (243), Expect = 2e-18
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2
Query: 263 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
Score = 71.6 bits (174), Expect = 2e-10
Identities = 31/39 (79%), Positives = 38/39 (97%)
Frame = +3
Query: 18 MASAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
MA+A+IEYRCFVGGLAWAT+D+AL EAFSAYG++LESK+
Sbjct: 1 MAAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKI 39
>ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299909 isoform 2 [Fragaria
vesca subsp. vesca]
Length = 161
Score = 96.7 bits (239), Expect = 6e-18
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +2
Query: 203 ICLCYYISVLLFFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN 382
+ +C+Y S + + + IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQ+LDGRN
Sbjct: 6 VTICHYDSCV---FAISQNRIINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQDLDGRN 62
Query: 383 ITVNEAQ 403
ITVNEAQ
Sbjct: 63 ITVNEAQ 69
>ref|XP_006339763.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like, partial
[Solanum tuberosum]
Length = 182
Score = 95.1 bits (235), Expect = 2e-17
Identities = 49/69 (71%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
Frame = +2
Query: 203 ICLC--YYISVLLFFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDG 376
IC C +Y+ + FF IINDRETGRSRGFGFVTF +EKSMR+AIE MNGQNLDG
Sbjct: 6 ICNCGSFYLPICFFF------QIINDRETGRSRGFGFVTFTDEKSMRNAIEAMNGQNLDG 59
Query: 377 RNITVNEAQ 403
RNITVNEAQ
Sbjct: 60 RNITVNEAQ 68
>gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 95.1 bits (235), Expect = 2e-17
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +2
Query: 263 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQNLDGRNITVNEAQ 85
Score = 63.5 bits (153), Expect = 6e-08
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +3
Query: 18 MASAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
MASAEIE+RCFVGGLAWAT + AL AFS +G+I+ESK+
Sbjct: 1 MASAEIEFRCFVGGLAWATDNDALERAFSPFGEIIESKI 39
>gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding
protein 2 [Pelargonium x hortorum]
Length = 166
Score = 94.4 bits (233), Expect = 3e-17
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +2
Query: 263 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
IINDRETGRSRGFGFVTF+NEKSM DAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFSNEKSMNDAIEGMNGQNLDGRNITVNEAQ 85
Score = 67.0 bits (162), Expect = 5e-09
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = +3
Query: 18 MASAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
MASA++EYRCFVGGLAWAT D AL +AFS YG+++ESK+
Sbjct: 1 MASADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKI 39
>gb|ERP62303.1| hypothetical protein POPTR_0004s16260g [Populus trichocarpa]
Length = 158
Score = 94.0 bits (232), Expect = 4e-17
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +2
Query: 263 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
IINDRETGRSRGFGFVTFNNEK+MRDAI+GMNGQ+LDGRNITVNEAQ
Sbjct: 38 IINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQ 84
Score = 67.4 bits (163), Expect = 4e-09
Identities = 28/37 (75%), Positives = 35/37 (94%)
Frame = +3
Query: 24 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
+AE+EYRCFVGGLAWATTDQ+L EAFS YG+I++SK+
Sbjct: 2 AAEVEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKI 38
>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 94.0 bits (232), Expect = 4e-17
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +2
Query: 263 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
IINDRETGRSRGFGFVTF +EKSMRDAIEGMNGQNLDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
Score = 75.9 bits (185), Expect = 1e-11
Identities = 33/39 (84%), Positives = 38/39 (97%)
Frame = +3
Query: 18 MASAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
MASA++E+RCFVGGLAWATTD +LHEAFSAYGDILESK+
Sbjct: 1 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKI 39
>ref|XP_002305429.1| predicted protein [Populus trichocarpa] gi|118481826|gb|ABK92850.1|
unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| glycine-rich RNA-binding
family protein [Populus trichocarpa]
Length = 165
Score = 94.0 bits (232), Expect = 4e-17
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +2
Query: 263 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
IINDRETGRSRGFGFVTFNNEK+MRDAI+GMNGQ+LDGRNITVNEAQ
Sbjct: 38 IINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQ 84
Score = 67.4 bits (163), Expect = 4e-09
Identities = 28/37 (75%), Positives = 35/37 (94%)
Frame = +3
Query: 24 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
+AE+EYRCFVGGLAWATTDQ+L EAFS YG+I++SK+
Sbjct: 2 AAEVEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKI 38
>dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 60.8 bits (146), Expect(2) = 4e-17
Identities = 30/53 (56%), Positives = 42/53 (79%)
Frame = +2
Query: 245 VTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
VT K ++ D+ +GRSRGF FVTF+ +K+M +AIE MNG +L+GR ITV++AQ
Sbjct: 69 VTEAK-VVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNGLDLEGRAITVDKAQ 120
Score = 53.5 bits (127), Expect(2) = 4e-17
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +3
Query: 30 EIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
E EYRCFVG L+W+TTD++L +AFS YG + E+KV
Sbjct: 40 EDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKV 74
>gb|EMT32326.1| Glycine-rich RNA-binding protein [Aegilops tauschii]
Length = 227
Score = 60.8 bits (146), Expect(2) = 4e-17
Identities = 30/53 (56%), Positives = 42/53 (79%)
Frame = +2
Query: 245 VTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
VT K ++ D+ +GRSRGF FVTF+ +K+M +AIE MNG +L+GR ITV++AQ
Sbjct: 33 VTEAK-VVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNGLDLEGRAITVDKAQ 84
Score = 53.5 bits (127), Expect(2) = 4e-17
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +3
Query: 30 EIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
E EYRCFVG L+W+TTD++L +AFS YG + E+KV
Sbjct: 4 EDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKV 38
>dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 60.8 bits (146), Expect(2) = 4e-17
Identities = 30/53 (56%), Positives = 42/53 (79%)
Frame = +2
Query: 245 VTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
VT K ++ D+ +GRSRGF FVTF+ +K+M +AIE MNG +L+GR ITV++AQ
Sbjct: 33 VTEAK-VVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNGLDLEGRAITVDKAQ 84
Score = 53.5 bits (127), Expect(2) = 4e-17
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +3
Query: 30 EIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
E EYRCFVG L+W+TTD++L +AFS YG + E+KV
Sbjct: 4 EDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKV 38
>ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299909 isoform 1 [Fragaria
vesca subsp. vesca]
Length = 177
Score = 93.2 bits (230), Expect = 7e-17
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +2
Query: 263 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQ 403
IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQ+LDGRNITVNEAQ
Sbjct: 39 IINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQDLDGRNITVNEAQ 85
Score = 62.4 bits (150), Expect = 1e-07
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = +3
Query: 18 MASAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 134
MASAEIE+RCFVGGLAWAT + AL AF+ +G+I+ESK+
Sbjct: 1 MASAEIEFRCFVGGLAWATDNDALERAFAPFGEIIESKI 39