BLASTX nr result
ID: Jatropha_contig00029764
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00029764
(541 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003605459.1| Splicing factor U2af large subunit B [Medica... 123 3e-26
emb|CBI17547.3| unnamed protein product [Vitis vinifera] 102 7e-22
gb|EOX91146.1| Splicing factor U2af large subunit A isoform 1 [T... 108 7e-22
gb|ESR38955.1| hypothetical protein CICLE_v10025221mg [Citrus cl... 108 1e-21
gb|EEE90659.2| hypothetical protein POPTR_0007s12550g [Populus t... 104 1e-20
ref|XP_004300618.1| PREDICTED: splicing factor U2af large subuni... 104 1e-20
ref|XP_002525113.1| splicing factor u2af large subunit, putative... 104 1e-20
gb|ERP61027.1| hypothetical protein POPTR_0005s12700g [Populus t... 103 2e-20
gb|EOX91147.1| Splicing factor U2af large subunit A isoform 2 [T... 103 2e-20
gb|ESR38954.1| hypothetical protein CICLE_v10025221mg [Citrus cl... 103 2e-20
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni... 102 4e-20
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera] 102 4e-20
gb|ABU45190.1| unknown [Capsicum frutescens] 102 5e-20
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large... 102 5e-20
gb|EMJ04963.1| hypothetical protein PRUPE_ppa003118mg [Prunus pe... 102 7e-20
gb|EMJ04962.1| hypothetical protein PRUPE_ppa003118mg [Prunus pe... 102 7e-20
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni... 102 7e-20
ref|XP_004138355.1| PREDICTED: splicing factor U2af large subuni... 102 7e-20
sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large... 101 9e-20
gb|EOY18756.1| Splicing factor U2af large subunit A isoform 4 [T... 100 2e-19
>ref|XP_003605459.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355506514|gb|AES87656.1| Splicing factor U2af large
subunit B [Medicago truncatula]
Length = 634
Score = 123 bits (308), Expect = 3e-26
Identities = 68/117 (58%), Positives = 76/117 (64%), Gaps = 3/117 (2%)
Frame = +2
Query: 200 ATLGYLPHCADYGSEPTSVAFMYKEESGHRFDGSCSSSTGNYCLFW*SCKYFHQNLNK*C 379
A LGYLPHCAD G EPTSVAFM KEES HRF + + ++
Sbjct: 207 AMLGYLPHCADNGREPTSVAFMSKEESMHRFLVGL-------------VRLQLETISTLV 253
Query: 380 QIPGTNPAISGMFPNMFPLGTGQ---FGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
I NPAISG+ PNMFP+G Q F ALP+MP+QAMTQQATRHARRVYVGGLPPT
Sbjct: 254 DITVPNPAISGVLPNMFPMGANQMPQFSALPMMPIQAMTQQATRHARRVYVGGLPPT 310
>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 102 bits (255), Expect(2) = 7e-22
Identities = 48/54 (88%), Positives = 49/54 (90%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPGT P I GMFPNMFPL +GQFGALPVMPVQAMTQQATRHARRVYVGGL PT
Sbjct: 16 QIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPT 69
Score = 26.6 bits (57), Expect(2) = 7e-22
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 294 MVLVRLQLATIACFGSL 344
M LVRLQ A+IACFG +
Sbjct: 1 MGLVRLQPASIACFGQI 17
>gb|EOX91146.1| Splicing factor U2af large subunit A isoform 1 [Theobroma cacao]
Length = 584
Score = 108 bits (270), Expect = 7e-22
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPGTNPA+ G+FPNMFPL TGQFGALPVMP+QAMTQQATRHARRVYVGGLPPT
Sbjct: 207 QIPGTNPALPGVFPNMFPLATGQFGALPVMPIQAMTQQATRHARRVYVGGLPPT 260
>gb|ESR38955.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
Length = 592
Score = 108 bits (269), Expect = 1e-21
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPG NPAI GMFPNMFPL TGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 215 QIPGANPAIPGMFPNMFPLVTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 268
>gb|EEE90659.2| hypothetical protein POPTR_0007s12550g [Populus trichocarpa]
Length = 565
Score = 104 bits (259), Expect = 1e-20
Identities = 49/53 (92%), Positives = 49/53 (92%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPP 538
QI GT P I GMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPP
Sbjct: 188 QITGTTPPIPGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPP 240
>ref|XP_004300618.1| PREDICTED: splicing factor U2af large subunit B-like [Fragaria
vesca subsp. vesca]
Length = 590
Score = 104 bits (259), Expect = 1e-20
Identities = 48/54 (88%), Positives = 49/54 (90%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
Q+PG P I GMFPNMFPL TGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 202 QMPGATPTIPGMFPNMFPLATGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 255
>ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large
subunit, putative [Ricinus communis]
Length = 549
Score = 104 bits (259), Expect = 1e-20
Identities = 51/55 (92%), Positives = 51/55 (92%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQ-FGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPGT PAI GMFPNMFPLGTGQ FG LPVMPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 212 QIPGTAPAIPGMFPNMFPLGTGQQFGTLPVMPVQAMTQQATRHARRVYVGGLPPT 266
>gb|ERP61027.1| hypothetical protein POPTR_0005s12700g [Populus trichocarpa]
Length = 588
Score = 103 bits (258), Expect = 2e-20
Identities = 49/54 (90%), Positives = 49/54 (90%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QI GT P I GMFPNMFPLGT QFGALPVMPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 207 QIAGTTPPIPGMFPNMFPLGTSQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 260
>gb|EOX91147.1| Splicing factor U2af large subunit A isoform 2 [Theobroma cacao]
Length = 585
Score = 103 bits (258), Expect = 2e-20
Identities = 49/55 (89%), Positives = 52/55 (94%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQ-FGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPGTNPA+ G+FPNMFPL TGQ FGALPVMP+QAMTQQATRHARRVYVGGLPPT
Sbjct: 207 QIPGTNPALPGVFPNMFPLATGQQFGALPVMPIQAMTQQATRHARRVYVGGLPPT 261
>gb|ESR38954.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
Length = 593
Score = 103 bits (257), Expect = 2e-20
Identities = 51/55 (92%), Positives = 51/55 (92%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQ-FGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPG NPAI GMFPNMFPL TGQ FGALPVMPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 215 QIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 269
>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 102 bits (255), Expect = 4e-20
Identities = 48/54 (88%), Positives = 49/54 (90%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPGT P I GMFPNMFPL +GQFGALPVMPVQAMTQQATRHARRVYVGGL PT
Sbjct: 191 QIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPT 244
>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 102 bits (255), Expect = 4e-20
Identities = 48/54 (88%), Positives = 49/54 (90%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPGT P I GMFPNMFPL +GQFGALPVMPVQAMTQQATRHARRVYVGGL PT
Sbjct: 188 QIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPT 241
>gb|ABU45190.1| unknown [Capsicum frutescens]
Length = 551
Score = 102 bits (254), Expect = 5e-20
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
Q+PG NP+I GMF NMFPL GQFGALP+MPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 174 QVPGANPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPT 227
>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
large subunit [Nicotiana plumbaginifolia]
Length = 573
Score = 102 bits (254), Expect = 5e-20
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLP 535
Q+PGTNP I GMFPNMFPL +GQFGALPVMP+QAMTQQATRHARRVYVGGLP
Sbjct: 196 QVPGTNPPIPGMFPNMFPLASGQFGALPVMPIQAMTQQATRHARRVYVGGLP 247
>gb|EMJ04963.1| hypothetical protein PRUPE_ppa003118mg [Prunus persica]
Length = 601
Score = 102 bits (253), Expect = 7e-20
Identities = 49/55 (89%), Positives = 51/55 (92%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQ-FGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPGT+P I GMFPNMFPL TGQ FG+LPVMPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 221 QIPGTSPTIPGMFPNMFPLATGQQFGSLPVMPVQAMTQQATRHARRVYVGGLPPT 275
>gb|EMJ04962.1| hypothetical protein PRUPE_ppa003118mg [Prunus persica]
Length = 539
Score = 102 bits (253), Expect = 7e-20
Identities = 49/55 (89%), Positives = 51/55 (92%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQ-FGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPGT+P I GMFPNMFPL TGQ FG+LPVMPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 221 QIPGTSPTIPGMFPNMFPLATGQQFGSLPVMPVQAMTQQATRHARRVYVGGLPPT 275
>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 102 bits (253), Expect = 7e-20
Identities = 50/55 (90%), Positives = 50/55 (90%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQ-FGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPGT PAI GMFP MFPL TGQ FGALPVMPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 210 QIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPT 264
>ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 102 bits (253), Expect = 7e-20
Identities = 50/55 (90%), Positives = 50/55 (90%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQ-FGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPGT PAI GMFP MFPL TGQ FGALPVMPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 210 QIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPT 264
>sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor,
large subunit [Nicotiana plumbaginifolia]
Length = 555
Score = 101 bits (252), Expect = 9e-20
Identities = 46/54 (85%), Positives = 50/54 (92%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
Q+PGTNPAI G+F NMFPL + QFGALP+MPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 178 QVPGTNPAIPGLFSNMFPLASSQFGALPMMPVQAMTQQATRHARRVYVGGLPPT 231
>gb|EOY18756.1| Splicing factor U2af large subunit A isoform 4 [Theobroma cacao]
Length = 596
Score = 100 bits (250), Expect = 2e-19
Identities = 48/55 (87%), Positives = 51/55 (92%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 QIPGTNPAISGMFPNMFPLGTGQ-FGALPVMPVQAMTQQATRHARRVYVGGLPPT 541
QIPGT+P + G+FPNMFPL TGQ FGALPVMPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 191 QIPGTSPTLPGVFPNMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPT 245