BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00029566
         (557 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006306808.1| hypothetical protein CARUB_v10008351mg [Caps...   120   3e-37
ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ric...   129   2e-33
gb|EOX94792.1| RAD3-like DNA-binding helicase protein isoform 1 ...   125   4e-32
gb|EOX94794.1| RAD3-like DNA-binding helicase protein isoform 3 ...   125   4e-32
gb|EOX94795.1| RAD3-like DNA-binding helicase protein isoform 4 ...   125   4e-32
gb|EOX94793.1| RAD3-like DNA-binding helicase protein isoform 2 ...   125   4e-32
emb|CBI32371.3| unnamed protein product [Vitis vinifera]              125   5e-32
ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-32
ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis v...   125   5e-32
ref|XP_002949637.1| hypothetical protein VOLCADRAFT_59582 [Volvo...   103   4e-31
ref|XP_001691713.1| hypothetical protein CHLREDRAFT_100548 [Chla...   104   5e-31
ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h...   122   1e-30
ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]...   120   1e-30
ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arab...   120   1e-30
gb|AAC72116.1| Strong similarity to gb|U04968 nucleotide excisio...   120   1e-30
ref|XP_004158946.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h...   122   1e-30
gb|ESQ36609.1| hypothetical protein EUTSA_v10006888mg [Eutrema s...   120   1e-30
gb|ESQ36610.1| hypothetical protein EUTSA_v10006888mg [Eutrema s...   120   1e-30
dbj|BAJ34374.1| unnamed protein product [Thellungiella halophila]     120   1e-30
ref|XP_004290662.1| PREDICTED: DNA repair helicase UVH6-like [Fr...   121   2e-30

>ref|XP_006306808.1| hypothetical protein CARUB_v10008351mg [Capsella rubella]
           gi|482575519|gb|EOA39706.1| hypothetical protein
           CARUB_v10008351mg [Capsella rubella]
          Length = 786

 Score =  120 bits (302), Expect(3) = 3e-37
 Identities = 60/82 (73%), Positives = 68/82 (82%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VS+VPDG+VCFFVSYSYMDGII  + ETG
Sbjct: 527 SDQLPVST--KFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETG 584

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQ K+VFIETQDVVE T
Sbjct: 585 ILKEIMQQKLVFIETQDVVETT 606



 Score = 42.4 bits (98), Expect(3) = 3e-37
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +1

Query: 157 IDLYPRLLDFTRLL*WKLYNVLDRNCICPMVLTR 258
           IDLYPRLL FT ++       + R+CICPMVLTR
Sbjct: 464 IDLYPRLLSFTPVVSRSFKMSMTRDCICPMVLTR 497



 Score = 38.5 bits (88), Expect(3) = 3e-37
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 607 LALDNYRRACDCGRGAVFF 625



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY L +P   +KL+YCT TVHEMEKTL ELK++
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYRLSRPDSPIKLVYCTRTVHEMEKTLAELKVL 90


>ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
           gi|223540142|gb|EEF41719.1| DNA repair helicase
           rad3/xp-d, putative [Ricinus communis]
          Length = 758

 Score =  129 bits (325), Expect(2) = 2e-33
 Identities = 65/82 (79%), Positives = 72/82 (87%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGVA NYGK L+E+VSVVPDGIVCFFVSYSYMDGIIN++ ETG
Sbjct: 499 SDQLPVST--KFDMRSDPGVARNYGKLLVEMVSVVPDGIVCFFVSYSYMDGIINSWNETG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQHK+VFIETQDVVE T
Sbjct: 557 ILKEIMQHKLVFIETQDVVETT 578



 Score = 38.5 bits (88), Expect(2) = 2e-33
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 579 LALDNYRRACDCGRGAVFF 597



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY+L KP   +KLIYCT TVHEMEKTL ELKL+
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYSLSKPQSPVKLIYCTRTVHEMEKTLAELKLL 90


>gb|EOX94792.1| RAD3-like DNA-binding helicase protein isoform 1 [Theobroma cacao]
          Length = 780

 Score =  125 bits (314), Expect(2) = 4e-32
 Identities = 62/82 (75%), Positives = 70/82 (85%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VSVVPDGIVCFFVSYSYMDGIIN + ++G
Sbjct: 521 SDQLPVST--KFDMRSDPGVVRNYGKLLLEMVSVVPDGIVCFFVSYSYMDGIINTWNDSG 578

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQHK+VFIETQDVVE T
Sbjct: 579 ILKEIMQHKLVFIETQDVVETT 600



 Score = 38.5 bits (88), Expect(2) = 4e-32
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 601 LALDNYRRACDCGRGAVFF 619



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY+L KP   +KLIYCT TVHEMEKTL ELKL+
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYSLSKPQSPIKLIYCTRTVHEMEKTLAELKLL 90


>gb|EOX94794.1| RAD3-like DNA-binding helicase protein isoform 3 [Theobroma cacao]
          Length = 758

 Score =  125 bits (314), Expect(2) = 4e-32
 Identities = 62/82 (75%), Positives = 70/82 (85%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VSVVPDGIVCFFVSYSYMDGIIN + ++G
Sbjct: 499 SDQLPVST--KFDMRSDPGVVRNYGKLLLEMVSVVPDGIVCFFVSYSYMDGIINTWNDSG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQHK+VFIETQDVVE T
Sbjct: 557 ILKEIMQHKLVFIETQDVVETT 578



 Score = 38.5 bits (88), Expect(2) = 4e-32
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 579 LALDNYRRACDCGRGAVFF 597



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY+L KP   +KLIYCT TVHEMEKTL ELKL+
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYSLSKPQSPIKLIYCTRTVHEMEKTLAELKLL 90


>gb|EOX94795.1| RAD3-like DNA-binding helicase protein isoform 4 [Theobroma cacao]
          Length = 683

 Score =  125 bits (314), Expect(2) = 4e-32
 Identities = 62/82 (75%), Positives = 70/82 (85%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VSVVPDGIVCFFVSYSYMDGIIN + ++G
Sbjct: 499 SDQLPVST--KFDMRSDPGVVRNYGKLLLEMVSVVPDGIVCFFVSYSYMDGIINTWNDSG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQHK+VFIETQDVVE T
Sbjct: 557 ILKEIMQHKLVFIETQDVVETT 578



 Score = 38.5 bits (88), Expect(2) = 4e-32
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 579 LALDNYRRACDCGRGAVFF 597



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY+L KP   +KLIYCT TVHEMEKTL ELKL+
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYSLSKPQSPIKLIYCTRTVHEMEKTLAELKLL 90


>gb|EOX94793.1| RAD3-like DNA-binding helicase protein isoform 2 [Theobroma cacao]
          Length = 672

 Score =  125 bits (314), Expect(2) = 4e-32
 Identities = 62/82 (75%), Positives = 70/82 (85%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VSVVPDGIVCFFVSYSYMDGIIN + ++G
Sbjct: 499 SDQLPVST--KFDMRSDPGVVRNYGKLLLEMVSVVPDGIVCFFVSYSYMDGIINTWNDSG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQHK+VFIETQDVVE T
Sbjct: 557 ILKEIMQHKLVFIETQDVVETT 578



 Score = 38.5 bits (88), Expect(2) = 4e-32
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 579 LALDNYRRACDCGRGAVFF 597



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY+L KP   +KLIYCT TVHEMEKTL ELKL+
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYSLSKPQSPIKLIYCTRTVHEMEKTLAELKLL 90


>emb|CBI32371.3| unnamed protein product [Vitis vinifera]
          Length = 922

 Score =  125 bits (313), Expect(2) = 5e-32
 Identities = 61/82 (74%), Positives = 70/82 (85%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYG+ L+E+VSVVPDGIVCFFVSYSYMDGI+N + E+G
Sbjct: 663 SDQLPVST--KFDMRSDPGVVRNYGRLLLEMVSVVPDGIVCFFVSYSYMDGIVNTWNESG 720

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQHK+VFIETQDVVE T
Sbjct: 721 ILKEIMQHKLVFIETQDVVETT 742



 Score = 38.5 bits (88), Expect(2) = 5e-32
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 743 LALDNYRRACDCGRGAVFF 761



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGHA  LLEM TG+GK     +   SY L KP   +KL+YCT TVHEMEKTL EL+L+
Sbjct: 33  DAKGHA--LLEMPTGTGKTIALLSLITSYALSKPSNPIKLLYCTRTVHEMEKTLAELRLL 90


>ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|222842578|gb|EEE80125.1|
           ULTRAVIOLET HYPERSENSITIVE 6 family protein [Populus
           trichocarpa]
          Length = 758

 Score =  125 bits (313), Expect(2) = 5e-32
 Identities = 61/82 (74%), Positives = 70/82 (85%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VS+VPDGIVCFFVSYSYMDGIIN + E+G
Sbjct: 499 SDQLPVST--KFDMRSDPGVVRNYGKLLVEMVSIVPDGIVCFFVSYSYMDGIINTWNESG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           +LKEIMQHK+VFIETQDVVE T
Sbjct: 557 LLKEIMQHKLVFIETQDVVETT 578



 Score = 38.5 bits (88), Expect(2) = 5e-32
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 579 LALDNYRRACDCGRGAVFF 597



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SYT+ KP   +KLIYCT TVHEMEKTL ELKL+
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYTISKPQGAIKLIYCTRTVHEMEKTLAELKLL 90


>ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
          Length = 758

 Score =  125 bits (313), Expect(2) = 5e-32
 Identities = 61/82 (74%), Positives = 70/82 (85%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYG+ L+E+VSVVPDGIVCFFVSYSYMDGI+N + E+G
Sbjct: 499 SDQLPVST--KFDMRSDPGVVRNYGRLLLEMVSVVPDGIVCFFVSYSYMDGIVNTWNESG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQHK+VFIETQDVVE T
Sbjct: 557 ILKEIMQHKLVFIETQDVVETT 578



 Score = 38.5 bits (88), Expect(2) = 5e-32
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 579 LALDNYRRACDCGRGAVFF 597



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGHA  LLEM TG+GK     +   SY L KP   +KL+YCT TVHEMEKTL EL+L+
Sbjct: 33  DAKGHA--LLEMPTGTGKTIALLSLITSYALSKPSNPIKLLYCTRTVHEMEKTLAELRLL 90


>ref|XP_002949637.1| hypothetical protein VOLCADRAFT_59582 [Volvox carteri f.
           nagariensis] gi|300264996|gb|EFJ49189.1| hypothetical
           protein VOLCADRAFT_59582 [Volvox carteri f. nagariensis]
          Length = 780

 Score =  103 bits (257), Expect(3) = 4e-31
 Identities = 49/72 (68%), Positives = 59/72 (81%)
 Frame = +3

Query: 285 KLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETGILKEIMQHKV 464
           K +MR DPGV  NYG+ L+EL +VVPDGIV FFVSY YMD II+ + + GIL+EIMQHK+
Sbjct: 527 KFEMRGDPGVMRNYGRLLVELSAVVPDGIVAFFVSYRYMDQIISKWHDMGILQEIMQHKL 586

Query: 465 VFIETQDVVEAT 500
           +FIETQDVVE T
Sbjct: 587 IFIETQDVVETT 598



 Score = 46.6 bits (109), Expect(3) = 4e-31
 Identities = 21/42 (50%), Positives = 28/42 (66%)
 Frame = +1

Query: 157 IDLYPRLLDFTRLL*WKLYNVLDRNCICPMVLTRRNDQSPMS 282
           IDLYPR+L+F  +        L R+C+CP+V+TR  DQ PMS
Sbjct: 484 IDLYPRILNFNPVAIQSFQMTLTRDCLCPVVVTRGADQMPMS 525



 Score = 30.8 bits (68), Expect(3) = 4e-31
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVF 553
           L L N+RR CD GRGAVF
Sbjct: 599 LALDNFRRACDSGRGAVF 616


>ref|XP_001691713.1| hypothetical protein CHLREDRAFT_100548 [Chlamydomonas reinhardtii]
           gi|158279059|gb|EDP04821.1| predicted protein
           [Chlamydomonas reinhardtii]
          Length = 341

 Score =  104 bits (259), Expect(3) = 5e-31
 Identities = 49/72 (68%), Positives = 59/72 (81%)
 Frame = +3

Query: 285 KLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETGILKEIMQHKV 464
           K +MRSDPGV  NYG+ L+EL + VPDGIV FFVSY YMD II+ + + GIL+EIMQHK+
Sbjct: 109 KFEMRSDPGVMRNYGRLLVELAATVPDGIVAFFVSYRYMDQIISKWHDMGILQEIMQHKL 168

Query: 465 VFIETQDVVEAT 500
           +FIETQDVVE T
Sbjct: 169 IFIETQDVVETT 180



 Score = 45.4 bits (106), Expect(3) = 5e-31
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +1

Query: 157 IDLYPRLLDFTRLL*WKLYNVLDRNCICPMVLTRRNDQSPMS 282
           IDLYPR+L+F  +        L R+C+CP+V+TR  DQ P+S
Sbjct: 66  IDLYPRILNFNPVAIQSFQMTLTRDCLCPVVVTRGADQMPLS 107



 Score = 30.8 bits (68), Expect(3) = 5e-31
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVF 553
           L L N+RR CD GRGAVF
Sbjct: 181 LALDNFRRACDSGRGAVF 198


>ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
           [Cucumis sativus]
          Length = 919

 Score =  122 bits (305), Expect(2) = 1e-30
 Identities = 61/82 (74%), Positives = 69/82 (84%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSD GV  NYG+ L+E+VS VPDGIVCFFVSYSYMDGIIN++ ETG
Sbjct: 660 SDQLPVST--KFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIINSWNETG 717

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQHK+VFIETQDVVE T
Sbjct: 718 ILKEIMQHKLVFIETQDVVETT 739



 Score = 37.4 bits (85), Expect(2) = 1e-30
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYR+ CDCGRGAVFF
Sbjct: 740 LALDNYRKACDCGRGAVFF 758



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY L KP   +KLIYCT TVHEMEKTL EL+L+
Sbjct: 194 DAKGH--CLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLL 251


>ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
           gi|30678494|ref|NP_849584.1| DNA repair helicase UVH6
           [Arabidopsis thaliana]
           gi|57013122|sp|Q8W4M7.1|ERCC2_ARATH RecName: Full=DNA
           repair helicase UVH6; AltName: Full=ERCC2 homolog;
           AltName: Full=RAD3 homolog; Short=AtUVH6; Short=AtXPD;
           AltName: Full=UV hypersensitive protein 6; AltName:
           Full=XPD homolog gi|17064790|gb|AAL32549.1| Strong
           similarity to nucleotide excision repair protein
           [Arabidopsis thaliana] gi|20258776|gb|AAM13910.1|
           putative DNA repair protein [Arabidopsis thaliana]
           gi|22651570|gb|AAM10793.1| DNA repair/transcription
           factor protein [Arabidopsis thaliana]
           gi|34098809|gb|AAQ56787.1| At1g03190 [Arabidopsis
           thaliana] gi|332189421|gb|AEE27542.1| DNA repair
           helicase UVH6 [Arabidopsis thaliana]
           gi|332189422|gb|AEE27543.1| DNA repair helicase UVH6
           [Arabidopsis thaliana]
          Length = 758

 Score =  120 bits (302), Expect(2) = 1e-30
 Identities = 60/82 (73%), Positives = 68/82 (82%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VS+VPDG+VCFFVSYSYMDGII  + ETG
Sbjct: 499 SDQLPVST--KFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQ K+VFIETQDVVE T
Sbjct: 557 ILKEIMQQKLVFIETQDVVETT 578



 Score = 38.5 bits (88), Expect(2) = 1e-30
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 579 LALDNYRRACDCGRGAVFF 597



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY L +P   +KL+YCT TVHEMEKTL ELKL+
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYRLSRPDSPIKLVYCTRTVHEMEKTLGELKLL 90


>ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arabidopsis lyrata subsp.
           lyrata] gi|297335286|gb|EFH65703.1| hypothetical protein
           ARALYDRAFT_470299 [Arabidopsis lyrata subsp. lyrata]
          Length = 758

 Score =  120 bits (302), Expect(2) = 1e-30
 Identities = 60/82 (73%), Positives = 68/82 (82%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VS+VPDG+VCFFVSYSYMDGII  + ETG
Sbjct: 499 SDQLPVST--KFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQ K+VFIETQDVVE T
Sbjct: 557 ILKEIMQQKLVFIETQDVVETT 578



 Score = 38.5 bits (88), Expect(2) = 1e-30
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 579 LALDNYRRACDCGRGAVFF 597



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY L +P   +KL+YCT TVHEMEKTL ELKL+
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYRLSRPDSPIKLVYCTRTVHEMEKTLGELKLL 90


>gb|AAC72116.1| Strong similarity to gb|U04968 nucleotide excision repair protein
           (ERCC2) from Cricetulus grisseus [Arabidopsis thaliana]
          Length = 735

 Score =  120 bits (302), Expect(2) = 1e-30
 Identities = 60/82 (73%), Positives = 68/82 (82%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VS+VPDG+VCFFVSYSYMDGII  + ETG
Sbjct: 512 SDQLPVST--KFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETG 569

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQ K+VFIETQDVVE T
Sbjct: 570 ILKEIMQQKLVFIETQDVVETT 591



 Score = 38.5 bits (88), Expect(2) = 1e-30
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 592 LALDNYRRACDCGRGAVFF 610



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY L +P   +KL+YCT TVHEMEKTL ELKL+
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYRLSRPDSPIKLVYCTRTVHEMEKTLGELKLL 90


>ref|XP_004158946.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
           [Cucumis sativus]
          Length = 598

 Score =  122 bits (305), Expect(2) = 1e-30
 Identities = 61/82 (74%), Positives = 69/82 (84%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSD GV  NYG+ L+E+VS VPDGIVCFFVSYSYMDGIIN++ ETG
Sbjct: 499 SDQLPVST--KFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIINSWNETG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQHK+VFIETQDVVE T
Sbjct: 557 ILKEIMQHKLVFIETQDVVETT 578



 Score = 37.4 bits (85), Expect(2) = 1e-30
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYR+ CDCGRGAVFF
Sbjct: 579 LALDNYRKACDCGRGAVFF 597



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+G      +   SY L KP   +KLIYCT TVHEMEKTL EL+L+
Sbjct: 33  DAKGH--CLLEMPTGTGXTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLL 90


>gb|ESQ36609.1| hypothetical protein EUTSA_v10006888mg [Eutrema salsugineum]
          Length = 758

 Score =  120 bits (301), Expect(2) = 1e-30
 Identities = 60/82 (73%), Positives = 68/82 (82%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VS+VPDG+VCFFVSYSYMDGII  + ETG
Sbjct: 499 SDQLPVST--KFDMRSDPGVVRNYGKFLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQ K+VFIETQDVVE T
Sbjct: 557 ILKEIMQQKLVFIETQDVVETT 578



 Score = 38.5 bits (88), Expect(2) = 1e-30
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 579 LALDNYRRACDCGRGAVFF 597



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY L +P   +KL+YCT TVHEMEKTL ELKL+
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYRLSRPDSPIKLVYCTRTVHEMEKTLAELKLL 90


>gb|ESQ36610.1| hypothetical protein EUTSA_v10006888mg [Eutrema salsugineum]
          Length = 601

 Score =  120 bits (301), Expect(2) = 1e-30
 Identities = 60/82 (73%), Positives = 68/82 (82%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VS+VPDG+VCFFVSYSYMDGII  + ETG
Sbjct: 499 SDQLPVST--KFDMRSDPGVVRNYGKFLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQ K+VFIETQDVVE T
Sbjct: 557 ILKEIMQQKLVFIETQDVVETT 578



 Score = 38.5 bits (88), Expect(2) = 1e-30
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 579 LALDNYRRACDCGRGAVFF 597



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +AKGH  CLLEM TG+GK     +   SY L +P   +KL+YCT TVHEMEKTL ELKL+
Sbjct: 33  DAKGH--CLLEMPTGTGKTIALLSLITSYRLSRPDSPIKLVYCTRTVHEMEKTLAELKLL 90


>dbj|BAJ34374.1| unnamed protein product [Thellungiella halophila]
          Length = 376

 Score =  120 bits (301), Expect(2) = 1e-30
 Identities = 60/82 (73%), Positives = 68/82 (82%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSDPGV  NYGK L+E+VS+VPDG+VCFFVSYSYMDGII  + ETG
Sbjct: 117 SDQLPVST--KFDMRSDPGVVRNYGKFLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETG 174

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQ K+VFIETQDVVE T
Sbjct: 175 ILKEIMQQKLVFIETQDVVETT 196



 Score = 38.5 bits (88), Expect(2) = 1e-30
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYRR CDCGRGAVFF
Sbjct: 197 LALDNYRRACDCGRGAVFF 215


>ref|XP_004290662.1| PREDICTED: DNA repair helicase UVH6-like [Fragaria vesca subsp.
           vesca]
          Length = 759

 Score =  121 bits (303), Expect(2) = 2e-30
 Identities = 59/82 (71%), Positives = 70/82 (85%)
 Frame = +3

Query: 255 SQE*PISDEPKLDMRSDPGVASNYGKPLMELVSVVPDGIVCFFVSYSYMDGIINNYKETG 434
           S + P+S   K DMRSD GV  NYG+ L+E+VSVVPDG+VCFFVSYSYMDGI+N++ E+G
Sbjct: 499 SDQLPVST--KFDMRSDLGVVRNYGRLLLEMVSVVPDGVVCFFVSYSYMDGIVNSWNESG 556

Query: 435 ILKEIMQHKVVFIETQDVVEAT 500
           ILKEIMQHK+VFIETQDVVE T
Sbjct: 557 ILKEIMQHKLVFIETQDVVETT 578



 Score = 37.4 bits (85), Expect(2) = 2e-30
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +2

Query: 500 LLLVNYRRTCDCGRGAVFF 556
           L L NYR+ CDCGRGAVFF
Sbjct: 579 LALDNYRKACDCGRGAVFF 597



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 6/60 (10%)
 Frame = +2

Query: 2   EAKGHACCLLEMSTGSGKNHGASA---SYTLPKP---LKLIYCTGTVHEMEKTLEELKLI 163
           +A+GH  CLLEM TG+GK     +   SYTL KP   +KLIYCT TVHEMEKTL ELKL+
Sbjct: 33  DARGH--CLLEMPTGTGKTIALLSLITSYTLSKPHNPVKLIYCTRTVHEMEKTLAELKLL 90