BLASTX nr result
ID: Jatropha_contig00029379
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00029379
(564 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513427.1| pentatricopeptide repeat-containing protein,... 129 5e-28
gb|EEE97635.2| hypothetical protein POPTR_0011s14750g [Populus t... 114 2e-23
gb|EOY13804.1| Pentatricopeptide repeat (PPR) superfamily protei... 113 4e-23
ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-23
gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucu... 104 2e-20
ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containi... 103 4e-20
ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containi... 103 4e-20
ref|XP_002300545.1| predicted protein [Populus trichocarpa] gi|2... 103 4e-20
ref|XP_004294203.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
gb|EMJ15117.1| hypothetical protein PRUPE_ppa004201mg [Prunus pe... 94 2e-17
gb|ESR54272.1| hypothetical protein CICLE_v10019503mg [Citrus cl... 92 1e-16
gb|ESW21266.1| hypothetical protein PHAVU_005G056300g [Phaseolus... 91 2e-16
ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containi... 89 7e-16
ref|XP_006346048.1| PREDICTED: pentatricopeptide repeat-containi... 69 6e-10
ref|XP_004488838.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
gb|ESQ27209.1| hypothetical protein EUTSA_v10018334mg [Eutrema s... 62 7e-08
ref|XP_004243988.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-07
ref|NP_178029.2| pentatricopeptide repeat-containing protein [Ar... 60 4e-07
ref|XP_002889230.1| pentatricopeptide repeat-containing protein ... 58 2e-06
>ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547335|gb|EEF48830.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 567
Score = 129 bits (324), Expect = 5e-28
Identities = 63/70 (90%), Positives = 65/70 (92%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLASTQITISPKDSVAT 532
MASLV+SVSPLT F EAARIACGFFSH+PNLHSFSLNK FTRVLASTQITISPKDSV T
Sbjct: 1 MASLVHSVSPLTNPFTEAARIACGFFSHIPNLHSFSLNKDFTRVLASTQITISPKDSVIT 60
Query: 533 LPNWRSGKND 562
LPNWRSGKND
Sbjct: 61 LPNWRSGKND 70
>gb|EEE97635.2| hypothetical protein POPTR_0011s14750g [Populus trichocarpa]
Length = 567
Score = 114 bits (284), Expect = 2e-23
Identities = 55/69 (79%), Positives = 60/69 (86%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLASTQITISPKDSVAT 532
MA+LVNSVSPL PE AR ACGFFS+VPN +SFSLNKGFTRVLASTQITISPKDSV T
Sbjct: 1 MATLVNSVSPLISPSPETARTACGFFSNVPNFYSFSLNKGFTRVLASTQITISPKDSVLT 60
Query: 533 LPNWRSGKN 559
LPNW+ G+N
Sbjct: 61 LPNWKVGRN 69
>gb|EOY13804.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 568
Score = 113 bits (282), Expect = 4e-23
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLASTQITISPKDSVAT 532
MA+L+NS+SP+T PE R CGFF +PNLHSFSLNKGFTRVLA+TQITISPKDSV T
Sbjct: 1 MATLLNSMSPMTNPSPETTRKTCGFFYQIPNLHSFSLNKGFTRVLATTQITISPKDSVFT 60
Query: 533 LPNWRSGKND 562
LPNW++GKND
Sbjct: 61 LPNWKTGKND 70
>ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein
VITISV_038804 [Vitis vinifera]
Length = 567
Score = 112 bits (281), Expect = 5e-23
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLASTQITISPKDSVAT 532
MA LVN++SP+T PE AR CGFFS VPNLH+ SLNKGF+RVLASTQITISPKD+V T
Sbjct: 1 MAILVNAMSPITSPSPENARKVCGFFSQVPNLHTLSLNKGFSRVLASTQITISPKDNVFT 60
Query: 533 LPNWRSGKND 562
LPNWRSGKND
Sbjct: 61 LPNWRSGKND 70
>gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 104 bits (259), Expect = 2e-20
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLASTQITISPKDSVAT 532
MA+L+N+VSP+T PE R CGFFSH+PNL SLNKGF++VLASTQITISPKD++ T
Sbjct: 1 MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 533 LPNWRSGK 556
LPNW++GK
Sbjct: 61 LPNWKTGK 68
>ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 103 bits (256), Expect = 4e-20
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLASTQITISPKDSVAT 532
MA+L+N+VSP+T PE R CGFFSH+PN+ SLNKGF++VLASTQITISPKD++ T
Sbjct: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 533 LPNWRSGKND 562
LPNW+ GK D
Sbjct: 61 LPNWKIGKLD 70
>ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 103 bits (256), Expect = 4e-20
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLASTQITISPKDSVAT 532
MA+L+N+VSP+T PE R CGFFSH+PN+ SLNKGF++VLASTQITISPKD++ T
Sbjct: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 533 LPNWRSGKND 562
LPNW+ GK D
Sbjct: 61 LPNWKIGKLD 70
>ref|XP_002300545.1| predicted protein [Populus trichocarpa] gi|222847803|gb|EEE85350.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 567
Score = 103 bits (256), Expect = 4e-20
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLASTQITISPKDSVAT 532
MA+LVNSVSPLT PE R ACG FS+VPN SFS NKGFTRVLAST ITISPKDSV T
Sbjct: 1 MATLVNSVSPLTNPSPETLRTACGLFSNVPNFRSFSQNKGFTRVLASTHITISPKDSVWT 60
Query: 533 LPNWRSGKND 562
L NW+ G+ D
Sbjct: 61 LSNWKVGRKD 70
>ref|XP_004294203.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 566
Score = 100 bits (249), Expect = 2e-19
Identities = 49/70 (70%), Positives = 58/70 (82%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLASTQITISPKDSVAT 532
MA L+NSVSP+T + PE AR CGFFSH+ + +F LNKGF+RVLASTQITISPKD+V T
Sbjct: 1 MAILINSVSPITHSSPETARKGCGFFSHI-RVQTFLLNKGFSRVLASTQITISPKDTVFT 59
Query: 533 LPNWRSGKND 562
LPNWR+ KND
Sbjct: 60 LPNWRNPKND 69
>gb|EMJ15117.1| hypothetical protein PRUPE_ppa004201mg [Prunus persica]
Length = 523
Score = 94.4 bits (233), Expect = 2e-17
Identities = 45/70 (64%), Positives = 55/70 (78%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLASTQITISPKDSVAT 532
MA LVNSV P+ PE+ R +C FFSH+ NL SL+KGF+RVLA+TQITISPKD+V T
Sbjct: 1 MAVLVNSVYPIAHPSPESTRNSCRFFSHIRNLQPLSLSKGFSRVLATTQITISPKDTVFT 60
Query: 533 LPNWRSGKND 562
LPNWR+ KN+
Sbjct: 61 LPNWRAAKNN 70
>gb|ESR54272.1| hypothetical protein CICLE_v10019503mg [Citrus clementina]
Length = 568
Score = 91.7 bits (226), Expect = 1e-16
Identities = 46/70 (65%), Positives = 54/70 (77%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLASTQITISPKDSVAT 532
MA+L++SVS L PE R A GF+S +PNLHSFSLNKGF RVLASTQ+TISPKDSV T
Sbjct: 1 MATLLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYT 60
Query: 533 LPNWRSGKND 562
PN + G N+
Sbjct: 61 KPNRKPGNNN 70
>gb|ESW21266.1| hypothetical protein PHAVU_005G056300g [Phaseolus vulgaris]
Length = 571
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSH--VPNLHSFSLNKGFTRVLASTQITISPKDSV 526
MASL+N+VSP P+ R CG F H +PNLH+FSLNKGF+RV ASTQI I+PKD+V
Sbjct: 1 MASLLNTVSPAANLSPKTKRPTCGGFLHSQLPNLHTFSLNKGFSRVSASTQIAIAPKDTV 60
Query: 527 ATLPNWRSGKND 562
LP WR G+ND
Sbjct: 61 FNLPKWRGGRND 72
>ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 89.0 bits (219), Expect = 7e-16
Identities = 44/72 (61%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSH--VPNLHSFSLNKGFTRVLASTQITISPKDSV 526
MASL+N+VSP P+ R CG F H PNL +FSLNKGF+RV ASTQI ISPKD++
Sbjct: 1 MASLLNTVSPAANLSPKTKRPTCGGFLHSQFPNLRTFSLNKGFSRVSASTQIAISPKDTI 60
Query: 527 ATLPNWRSGKND 562
LPNWR G+ND
Sbjct: 61 FNLPNWRVGRND 72
>ref|XP_006346048.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Solanum tuberosum]
Length = 577
Score = 69.3 bits (168), Expect = 6e-10
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 8/78 (10%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLAST--------QITI 508
MA L+NSVS +T PE AR +CGF +H+P F ++ +R LAS+ Q+ +
Sbjct: 1 MAVLLNSVSIITNPSPENARNSCGFSTHIPKFLPFFQSRSISRNLASSHLSPALKEQVPV 60
Query: 509 SPKDSVATLPNWRSGKND 562
+ K S+ TLPNWRSGKND
Sbjct: 61 ASKGSIFTLPNWRSGKND 78
>ref|XP_004488838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cicer arietinum]
Length = 572
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGF-FSHVPNLHSFSL----NKGFTRVLASTQITISPK 517
MA+L+N+V + R C F + HVPNLH+ + K +RVLAST ITI K
Sbjct: 1 MATLLNTVLSASNLPANPKRNGCSFLYFHVPNLHNHTFLTFNKKRLSRVLASTHITIPSK 60
Query: 518 DSVATLPNWRSGKND 562
DSV LPNW++GKND
Sbjct: 61 DSVFNLPNWKAGKND 75
>gb|ESQ27209.1| hypothetical protein EUTSA_v10018334mg [Eutrema salsugineum]
Length = 581
Score = 62.4 bits (150), Expect = 7e-08
Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Frame = +2
Query: 353 MASLVNSV-SPLTKAFPEAARIACGFFSHVPN--LHSFSLNKGFTRVLASTQITISPKDS 523
M++L+NSV S PE+ R A GF SH+P LH S+NKG RVLASTQIT+SPKDS
Sbjct: 1 MSTLLNSVLSMAANPSPESPRKALGFVSHIPTGYLHFSSVNKGVARVLASTQITLSPKDS 60
Query: 524 VATL 535
T+
Sbjct: 61 AFTV 64
>ref|XP_004243988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Solanum lycopersicum]
Length = 577
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 8/78 (10%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAARIACGFFSHVPNLHSFSLNKGFTRVLAST--------QITI 508
MA +NSVS +T PE AR GF +H+P F ++ +R LAS+ Q+ +
Sbjct: 1 MAVPLNSVSIITNPSPENARNPRGFSTHIPKFLPFFQSRSISRNLASSHLSPALKEQLPV 60
Query: 509 SPKDSVATLPNWRSGKND 562
+ K S+ TLPNWRSGKND
Sbjct: 61 ASKGSIFTLPNWRSGKND 78
>ref|NP_178029.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806390|sp|A3KPF8.1|PP131_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g79080, chloroplastic; Flags: Precursor
gi|126352286|gb|ABO09888.1| At1g79080 [Arabidopsis
thaliana] gi|332198080|gb|AEE36201.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 60.1 bits (144), Expect = 4e-07
Identities = 36/64 (56%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
Frame = +2
Query: 353 MASLVNSVSPLTKAFPEAA-RIACGFFSHVPN--LHSFSLNKGFTRVLASTQITISPKDS 523
M++L+NSV L+ A PE++ R A GF SH+P+ LH S++KG RVLASTQIT+SPKDS
Sbjct: 1 MSTLLNSV--LSMASPESSPRKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDS 58
Query: 524 VATL 535
T+
Sbjct: 59 AFTI 62
>ref|XP_002889230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335071|gb|EFH65489.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 580
Score = 57.8 bits (138), Expect = 2e-06
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Frame = +2
Query: 353 MASLVNSV-SPLTKAFPEAA-RIACGFFSHVPN--LHSFSLNKGFTRVLASTQITISPKD 520
M++L+NSV S PE++ R + GF SH+P LH S+NKG RVLASTQIT+SPKD
Sbjct: 1 MSTLLNSVLSMAANPSPESSPRKSLGFVSHIPTGFLHFSSVNKGVARVLASTQITLSPKD 60
Query: 521 SVATL 535
S T+
Sbjct: 61 SAFTI 65