BLASTX nr result
ID: Jatropha_contig00029250
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00029250
(649 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [... 117 2e-24
gb|ERP56881.1| hypothetical protein POPTR_0009s06210g [Populus t... 88 2e-15
gb|ERP56880.1| hypothetical protein POPTR_0009s06210g [Populus t... 88 2e-15
gb|ERP56879.1| hypothetical protein POPTR_0009s06210g [Populus t... 88 2e-15
gb|ERP56878.1| hypothetical protein POPTR_0009s06210g [Populus t... 88 2e-15
gb|ERP56877.1| hypothetical protein POPTR_0009s06210g [Populus t... 88 2e-15
gb|EMJ20400.1| hypothetical protein PRUPE_ppa017025mg [Prunus pe... 79 1e-12
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,... 74 3e-11
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-... 71 2e-10
gb|ESR52198.1| hypothetical protein CICLE_v10033747mg [Citrus cl... 67 6e-09
ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD,... 65 2e-08
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,... 65 2e-08
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 65 2e-08
>ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223543041|gb|EEF44576.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 389
Score = 117 bits (294), Expect = 2e-24
Identities = 69/125 (55%), Positives = 84/125 (67%), Gaps = 1/125 (0%)
Frame = +2
Query: 272 IVSESGEVNDERERNGNGDLVARRKNRRERAVGS-DFVAVEEEKNGQNETALFQSSSNGY 448
+VS SGE +GN LVARRK RR+R G + + VEEE++ Q E ALFQ +NGY
Sbjct: 65 LVSLSGE-------SGNS-LVARRKKRRKRRKGFIECLKVEEERDDQCEGALFQPVNNGY 116
Query: 449 LSPIEETEFCLCLKDQXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKES 628
LS IEE EFCLCLKD TQEHEPT KQLA+AL+MR+++V KI CKG++S
Sbjct: 117 LSSIEEAEFCLCLKDHARVEAARRRIAETQEHEPTSKQLAEALRMRKKNVDKILCKGRQS 176
Query: 629 RRRIT 643
R RIT
Sbjct: 177 RERIT 181
>gb|ERP56881.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
Length = 423
Score = 88.2 bits (217), Expect = 2e-15
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +2
Query: 287 GEVNDERERNGNGDLVARRKNRRER--AVGSDFVAVEEEKNGQNE--TALFQSSSNGYLS 454
GEV + E + NG L ARRK RR+R +G V + E++G +E + +S GYLS
Sbjct: 69 GEVLFDGESD-NGGLKARRKRRRKRRKGLGQSLVVDDGERDGGHEYKRVILESVKRGYLS 127
Query: 455 PIEETEFCLCLKDQXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKESRR 634
P EE EF +CLK + QE +PT KQLAKAL+M + SV + CKG+ESR
Sbjct: 128 PKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESRE 187
Query: 635 RI 640
+I
Sbjct: 188 KI 189
>gb|ERP56880.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
Length = 419
Score = 88.2 bits (217), Expect = 2e-15
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +2
Query: 287 GEVNDERERNGNGDLVARRKNRRER--AVGSDFVAVEEEKNGQNE--TALFQSSSNGYLS 454
GEV + E + NG L ARRK RR+R +G V + E++G +E + +S GYLS
Sbjct: 69 GEVLFDGESD-NGGLKARRKRRRKRRKGLGQSLVVDDGERDGGHEYKRVILESVKRGYLS 127
Query: 455 PIEETEFCLCLKDQXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKESRR 634
P EE EF +CLK + QE +PT KQLAKAL+M + SV + CKG+ESR
Sbjct: 128 PKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESRE 187
Query: 635 RI 640
+I
Sbjct: 188 KI 189
>gb|ERP56879.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
Length = 284
Score = 88.2 bits (217), Expect = 2e-15
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +2
Query: 287 GEVNDERERNGNGDLVARRKNRRER--AVGSDFVAVEEEKNGQNE--TALFQSSSNGYLS 454
GEV + E + NG L ARRK RR+R +G V + E++G +E + +S GYLS
Sbjct: 69 GEVLFDGESD-NGGLKARRKRRRKRRKGLGQSLVVDDGERDGGHEYKRVILESVKRGYLS 127
Query: 455 PIEETEFCLCLKDQXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKESRR 634
P EE EF +CLK + QE +PT KQLAKAL+M + SV + CKG+ESR
Sbjct: 128 PKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESRE 187
Query: 635 RI 640
+I
Sbjct: 188 KI 189
>gb|ERP56878.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
Length = 276
Score = 88.2 bits (217), Expect = 2e-15
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +2
Query: 287 GEVNDERERNGNGDLVARRKNRRER--AVGSDFVAVEEEKNGQNE--TALFQSSSNGYLS 454
GEV + E + NG L ARRK RR+R +G V + E++G +E + +S GYLS
Sbjct: 69 GEVLFDGESD-NGGLKARRKRRRKRRKGLGQSLVVDDGERDGGHEYKRVILESVKRGYLS 127
Query: 455 PIEETEFCLCLKDQXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKESRR 634
P EE EF +CLK + QE +PT KQLAKAL+M + SV + CKG+ESR
Sbjct: 128 PKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESRE 187
Query: 635 RI 640
+I
Sbjct: 188 KI 189
>gb|ERP56877.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
Length = 331
Score = 88.2 bits (217), Expect = 2e-15
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +2
Query: 287 GEVNDERERNGNGDLVARRKNRRER--AVGSDFVAVEEEKNGQNE--TALFQSSSNGYLS 454
GEV + E + NG L ARRK RR+R +G V + E++G +E + +S GYLS
Sbjct: 69 GEVLFDGESD-NGGLKARRKRRRKRRKGLGQSLVVDDGERDGGHEYKRVILESVKRGYLS 127
Query: 455 PIEETEFCLCLKDQXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKESRR 634
P EE EF +CLK + QE +PT KQLAKAL+M + SV + CKG+ESR
Sbjct: 128 PKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESRE 187
Query: 635 RI 640
+I
Sbjct: 188 KI 189
>gb|EMJ20400.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
Length = 440
Score = 78.6 bits (192), Expect = 1e-12
Identities = 44/109 (40%), Positives = 63/109 (57%)
Frame = +2
Query: 314 NGNGDLVARRKNRRERAVGSDFVAVEEEKNGQNETALFQSSSNGYLSPIEETEFCLCLKD 493
N +G LVARRK RR+R G + + E +++ ++ F +LSP EE E CL LK+
Sbjct: 99 NESGGLVARRKRRRKRRKGLEALDEEMKRDVEDGMVSFGFVRYEHLSPREEAECCLSLKE 158
Query: 494 QXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKESRRRI 640
Q+HEPT KQLAKA+ M+ RS+ K+ CK +ES+ +I
Sbjct: 159 GARLESERFRVVEAQKHEPTSKQLAKAMGMKMRSIDKVLCKRRESQEKI 207
>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 452
Score = 74.3 bits (181), Expect = 3e-11
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Frame = +2
Query: 314 NGNGDLVARRKNRRERAVGSDFVAVEEEKNGQNETALFQSS--SNGYLSPIEETEFCLCL 487
+G G +V R+K RR R G + +EE+N + E F S GYLSP EE + C+ L
Sbjct: 110 SGGGMMVRRKKRRRRRRKGLECFD-DEERNRELEDGRFSFGVVSYGYLSPREEADCCMSL 168
Query: 488 KDQXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKESRRRI 640
K+ QEHEPT KQLA A++++ S+ K+ C +ES+ RI
Sbjct: 169 KEGAKLESERTRFTEAQEHEPTSKQLANAMRIKMSSIDKVICNRRESQERI 219
>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 426
Score = 71.2 bits (173), Expect = 2e-10
Identities = 41/111 (36%), Positives = 59/111 (53%)
Frame = +2
Query: 308 ERNGNGDLVARRKNRRERAVGSDFVAVEEEKNGQNETALFQSSSNGYLSPIEETEFCLCL 487
E G G V R + R A+G VE+ + F ++ + L+P EE EFCLCL
Sbjct: 87 EEEGGGCRVVRVRRRGVEALGM----VEKWDGEEVHEVSFGAARSAVLTPREEAEFCLCL 142
Query: 488 KDQXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKESRRRI 640
K++ T+EHEPT Q A+A+ ++R S+ K+ C G+ESR RI
Sbjct: 143 KEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNGRESRERI 193
>gb|ESR52198.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
Length = 436
Score = 66.6 bits (161), Expect = 6e-09
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Frame = +2
Query: 329 LVARRKNRRERAVGSDFVAVEEEKNGQNETALFQ-SSSNGYLSPIEETEFCLCLKDQXXX 505
++ RR R++R SDF+ +++NG+ + L + +SN YL+P EE E C LK+
Sbjct: 102 MMRRRSRRKKRTKESDFL---DKENGELDYNLVKCKTSNLYLTPSEEAEICYSLKEGAKL 158
Query: 506 XXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKESRRRI 640
+EHE KQLAKA M++ V KI CK +ES+ RI
Sbjct: 159 EEARKTVAQAEEHESISKQLAKATGMKQSKVDKILCKERESQERI 203
>ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 341
Score = 65.1 bits (157), Expect = 2e-08
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +2
Query: 317 GNGDLVARRKNRRERAVGSDFVAVEEEKNGQNETALFQSSSN-GYLSPIEETEFCLCLKD 493
G+G + ++K R+ R V V+ E+N AL GYLSP EE E CLCLK+
Sbjct: 7 GDGTVAWKKKRRKRRKE----VGVKAEENW---IALSSGPLRPGYLSPKEEAELCLCLKE 59
Query: 494 QXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKESRRRI 640
TQEHEPT KQLA A+ + + +I C+ +ESR R+
Sbjct: 60 AVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRL 108
>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 436
Score = 65.1 bits (157), Expect = 2e-08
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +2
Query: 317 GNGDLVARRKNRRERAVGSDFVAVEEEKNGQNETALFQSSSN-GYLSPIEETEFCLCLKD 493
G+G + ++K R+ R V V+ E+N AL GYLSP EE E CLCLK+
Sbjct: 102 GDGTVAWKKKRRKRRKE----VGVKAEENW---IALSSGPLRPGYLSPKEEAELCLCLKE 154
Query: 494 QXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGKIPCKGKESRRRI 640
TQEHEPT KQLA A+ + + +I C+ +ESR R+
Sbjct: 155 AVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRL 203
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 65.1 bits (157), Expect = 2e-08
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 425 FQSSSNGYLSPIEETEFCLCLKDQXXXXXXXXXXXXTQEHEPTLKQLAKALKMRRRSVGK 604
F ++ + L+P EE EFCLCLK++ T+EHEPT Q A+A+ ++R S+ K
Sbjct: 15 FGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDK 74
Query: 605 IPCKGKESRRRI 640
+ C G+ESR RI
Sbjct: 75 MLCNGRESRERI 86