BLASTX nr result
ID: Jatropha_contig00029078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00029078
(372 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531519.1| histone h1/h5, putative [Ricinus communis] g... 76 5e-12
gb|ERP60928.1| HISTONE H1-3 family protein [Populus trichocarpa] 70 3e-10
ref|XP_002327673.1| histone H1 [Populus trichocarpa] 70 3e-10
ref|XP_004134876.1| PREDICTED: histone H1-like isoform 3 [Cucumi... 67 2e-09
ref|XP_004134874.1| PREDICTED: histone H1-like isoform 1 [Cucumi... 67 2e-09
gb|EOX90890.1| Histone H1-3 [Theobroma cacao] 67 3e-09
gb|EMJ03823.1| hypothetical protein PRUPE_ppa011941mg [Prunus pe... 66 4e-09
ref|XP_002310849.1| histone H1 [Populus trichocarpa] gi|11848435... 65 7e-09
ref|XP_003537627.1| PREDICTED: LOW QUALITY PROTEIN: histone H1-l... 64 2e-08
ref|NP_001237870.1| uncharacterized protein LOC100500169 [Glycin... 64 2e-08
emb|CAJ38366.1| histone H1 [Plantago major] 64 2e-08
gb|AFK34182.1| unknown [Lotus japonicus] 63 4e-08
gb|ACD99685.1| histone H1-like protein [Camellia sinensis] 63 4e-08
gb|ESW29933.1| hypothetical protein PHAVU_002G110800g [Phaseolus... 62 1e-07
ref|XP_002270241.1| PREDICTED: histone H1 [Vitis vinifera] gi|29... 61 2e-07
ref|XP_004512122.1| PREDICTED: histone H1-like [Cicer arietinum] 60 2e-07
ref|XP_006340718.1| PREDICTED: histone H1-like [Solanum tuberosum] 59 5e-07
gb|AAD48472.1|AF170089_1 histone H1C [Nicotiana tabacum] 59 5e-07
gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense] 59 5e-07
gb|AAN37904.1| histone H1D [Nicotiana tabacum] 59 5e-07
>ref|XP_002531519.1| histone h1/h5, putative [Ricinus communis]
gi|223528872|gb|EEF30873.1| histone h1/h5, putative
[Ricinus communis]
Length = 213
Score = 75.9 bits (185), Expect = 5e-12
Identities = 50/89 (56%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS-AGXXXXXXXXXXXXXXXXXXXXX 178
HKAVLP+NFKKILALQLKNSAARGKL KIRASYKLS +
Sbjct: 85 HKAVLPSNFKKILALQLKNSAARGKLIKIRASYKLSESNKKEKGTTKVPKAAKGGDKKPK 144
Query: 179 XXXXXXXXXRKTRSVNKTVEAAKKPAKRA 265
RKTRSVNK EAAKKPA A
Sbjct: 145 QPKTANVSTRKTRSVNK-AEAAKKPAAGA 172
>gb|ERP60928.1| HISTONE H1-3 family protein [Populus trichocarpa]
Length = 202
Score = 70.1 bits (170), Expect = 3e-10
Identities = 45/83 (54%), Positives = 45/83 (54%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLSAGXXXXXXXXXXXXXXXXXXXXXX 181
HKAVLPANFKKIL LQLKNSAARGKL KIRASYKLS
Sbjct: 86 HKAVLPANFKKILGLQLKNSAARGKLIKIRASYKLSEA--GKKEKSTTGKVSKGSSAVKK 143
Query: 182 XXXXXXXXRKTRSVNKTVEAAKK 250
RKTRSVNK AKK
Sbjct: 144 TKEVKPSMRKTRSVNKADAGAKK 166
>ref|XP_002327673.1| histone H1 [Populus trichocarpa]
Length = 202
Score = 70.1 bits (170), Expect = 3e-10
Identities = 45/83 (54%), Positives = 45/83 (54%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLSAGXXXXXXXXXXXXXXXXXXXXXX 181
HKAVLPANFKKIL LQLKNSAARGKL KIRASYKLS
Sbjct: 86 HKAVLPANFKKILGLQLKNSAARGKLIKIRASYKLSEA--GKKEKSTTGKVSKGSSAVKK 143
Query: 182 XXXXXXXXRKTRSVNKTVEAAKK 250
RKTRSVNK AKK
Sbjct: 144 TKEVKPSMRKTRSVNKADAGAKK 166
>ref|XP_004134876.1| PREDICTED: histone H1-like isoform 3 [Cucumis sativus]
gi|449491384|ref|XP_004158879.1| PREDICTED: histone
H1-like isoform 3 [Cucumis sativus]
Length = 197
Score = 67.4 bits (163), Expect = 2e-09
Identities = 42/89 (47%), Positives = 48/89 (53%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLSAGXXXXXXXXXXXXXXXXXXXXXX 181
HKAVLPANF+KILALQLKNS A+GKLTKI+ASYKLS
Sbjct: 79 HKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKDMNATKVAKANAEKKTKQ 138
Query: 182 XXXXXXXXRKTRSVNKTVEAAKKPAKRAV 268
RK ++V KT EA K K+ V
Sbjct: 139 ARTTRTTGRKRKAV-KTEEAVSKAVKKVV 166
>ref|XP_004134874.1| PREDICTED: histone H1-like isoform 1 [Cucumis sativus]
gi|449434182|ref|XP_004134875.1| PREDICTED: histone
H1-like isoform 2 [Cucumis sativus]
gi|449491377|ref|XP_004158877.1| PREDICTED: histone
H1-like isoform 1 [Cucumis sativus]
gi|449491381|ref|XP_004158878.1| PREDICTED: histone
H1-like isoform 2 [Cucumis sativus]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09
Identities = 42/89 (47%), Positives = 48/89 (53%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLSAGXXXXXXXXXXXXXXXXXXXXXX 181
HKAVLPANF+KILALQLKNS A+GKLTKI+ASYKLS
Sbjct: 89 HKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKDMNATKVAKANAEKKTKQ 148
Query: 182 XXXXXXXXRKTRSVNKTVEAAKKPAKRAV 268
RK ++V KT EA K K+ V
Sbjct: 149 ARTTRTTGRKRKAV-KTEEAVSKAVKKVV 176
>gb|EOX90890.1| Histone H1-3 [Theobroma cacao]
Length = 195
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS 109
HKAVLPANF+KILALQLKNSAARGKL KI+ASYKLS
Sbjct: 90 HKAVLPANFRKILALQLKNSAARGKLIKIKASYKLS 125
>gb|EMJ03823.1| hypothetical protein PRUPE_ppa011941mg [Prunus persica]
Length = 190
Score = 66.2 bits (160), Expect = 4e-09
Identities = 41/87 (47%), Positives = 47/87 (54%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLSAGXXXXXXXXXXXXXXXXXXXXXX 181
HKAVLP+NFKK LALQLKNSAARGKL KIRASYKLS
Sbjct: 87 HKAVLPSNFKKTLALQLKNSAARGKLIKIRASYKLSEA-----------GKKDKTTGKTK 135
Query: 182 XXXXXXXXRKTRSVNKTVEAAKKPAKR 262
+KT++ +A KKPAK+
Sbjct: 136 ASTKPKTEKKTKTTAPAPKATKKPAKK 162
>ref|XP_002310849.1| histone H1 [Populus trichocarpa] gi|118484356|gb|ABK94055.1|
unknown [Populus trichocarpa]
gi|222853752|gb|EEE91299.1| HISTONE H1-3 family protein
[Populus trichocarpa]
Length = 179
Score = 65.5 bits (158), Expect = 7e-09
Identities = 43/85 (50%), Positives = 44/85 (51%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLSAGXXXXXXXXXXXXXXXXXXXXXX 181
HKAVLPANFKKIL LQLKNSA GKL KIRASYKL
Sbjct: 86 HKAVLPANFKKILGLQLKNSATGGKLIKIRASYKLPEA--------------------KK 125
Query: 182 XXXXXXXXRKTRSVNKTVEAAKKPA 256
RKTRSVNK +AKK A
Sbjct: 126 TKEVKPTTRKTRSVNKAEASAKKVA 150
>ref|XP_003537627.1| PREDICTED: LOW QUALITY PROTEIN: histone H1-like [Glycine max]
Length = 194
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS 109
HKAVLPANFKKIL LQLKN AARGKL KI+ASYKL+
Sbjct: 79 HKAVLPANFKKILGLQLKNQAARGKLVKIKASYKLA 114
>ref|NP_001237870.1| uncharacterized protein LOC100500169 [Glycine max]
gi|255629522|gb|ACU15107.1| unknown [Glycine max]
Length = 202
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS 109
HKAVLPANFKKIL LQLKN AARGKL KI+ASYKL+
Sbjct: 80 HKAVLPANFKKILGLQLKNQAARGKLVKIKASYKLT 115
>emb|CAJ38366.1| histone H1 [Plantago major]
Length = 164
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLSAG 115
HKAVLPANF+K+L LQLKNSAA+GKL KI+ASYKL+ G
Sbjct: 62 HKAVLPANFRKMLGLQLKNSAAKGKLIKIKASYKLAGG 99
>gb|AFK34182.1| unknown [Lotus japonicus]
Length = 207
Score = 62.8 bits (151), Expect = 4e-08
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS 109
HK+VLPANFKKIL LQLKN AA+GKL KI+ASYKLS
Sbjct: 82 HKSVLPANFKKILGLQLKNQAAKGKLVKIKASYKLS 117
>gb|ACD99685.1| histone H1-like protein [Camellia sinensis]
Length = 207
Score = 62.8 bits (151), Expect = 4e-08
Identities = 46/112 (41%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS-AGXXXXXXXXXXXXXXXXXXXXX 178
HK VLP NF+KIL LQLKNSAA+GKL KI+ASYKLS AG
Sbjct: 86 HKPVLPENFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKDNGTTKAPMAEKKPKQARS 145
Query: 179 XXXXXXXXXRKTRSVNKTVEAAKKPAKRAVGXXXXXXXXXXXXXXXXXIKSP 334
TRS K E KK AK+ VG IKSP
Sbjct: 146 TTTAARAGAPNTRSTKKKSETEKKTAKK-VGPKKAKKATPGKPKQLKSIKSP 196
>gb|ESW29933.1| hypothetical protein PHAVU_002G110800g [Phaseolus vulgaris]
Length = 193
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS 109
HKAVLPANFKKIL LQLKN A RG L KI+ASYKLS
Sbjct: 77 HKAVLPANFKKILGLQLKNQATRGNLVKIKASYKLS 112
>ref|XP_002270241.1| PREDICTED: histone H1 [Vitis vinifera] gi|297735035|emb|CBI17397.3|
unnamed protein product [Vitis vinifera]
Length = 183
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS 109
HKAVLPANF+KIL+LQLKNS A+G L KI+ASYKLS
Sbjct: 82 HKAVLPANFRKILSLQLKNSVAKGNLIKIKASYKLS 117
>ref|XP_004512122.1| PREDICTED: histone H1-like [Cicer arietinum]
Length = 197
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS 109
HK+ LPANFKK+L+LQLKN AA+GKL KI+ASYKLS
Sbjct: 83 HKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLS 118
>ref|XP_006340718.1| PREDICTED: histone H1-like [Solanum tuberosum]
Length = 207
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS 109
HK LPANF+KIL LQLKNSAA+GKL KI+ASYKLS
Sbjct: 87 HKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLS 122
>gb|AAD48472.1|AF170089_1 histone H1C [Nicotiana tabacum]
Length = 206
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS 109
HK LPANF+KIL LQLKNSAA+GKL KI+ASYKLS
Sbjct: 87 HKDELPANFRKILGLQLKNSAAKGKLMKIKASYKLS 122
>gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]
Length = 202
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/83 (45%), Positives = 42/83 (50%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLSAGXXXXXXXXXXXXXXXXXXXXXX 181
HK LPANF+KIL LQLKNSAA+GKL KI+ASYKLS
Sbjct: 82 HKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKETTTKTSTKKLLKADSK-- 139
Query: 182 XXXXXXXXRKTRSVNKTVEAAKK 250
+KTRS T AAKK
Sbjct: 140 --------KKTRSTRATATAAKK 154
>gb|AAN37904.1| histone H1D [Nicotiana tabacum]
Length = 206
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +2
Query: 2 HKAVLPANFKKILALQLKNSAARGKLTKIRASYKLS 109
HK LPANF+KIL LQLKNSAA+GKL KI+ASYKLS
Sbjct: 87 HKDELPANFRKILGLQLKNSAAKGKLMKIKASYKLS 122