BLASTX nr result
ID: Jatropha_contig00028948
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Jatropha_contig00028948 (478 letters) Database: NCBI-nr (updated 2014/02/11) 35,149,712 sequences; 12,374,887,350 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002301173.1| predicted protein [Populus trichocarpa] gi|2... 85 8e-15 ref|XP_002510190.1| conserved hypothetical protein [Ricinus comm... 69 8e-10 ref|XP_002327162.1| predicted protein [Populus trichocarpa] gi|5... 55 7e-06 >ref|XP_002301173.1| predicted protein [Populus trichocarpa] gi|222842899|gb|EEE80446.1| basic helix-loop-helix family protein [Populus trichocarpa] Length = 307 Score = 85.1 bits (209), Expect = 8e-15 Identities = 52/118 (44%), Positives = 60/118 (50%) Frame = +3 Query: 123 MADLYGTATSPAPEPEEIXXXXXXXXXXXXXXXXXKFMQNXXXXXXXXXXXXXXXXXXTE 302 MADLYG A SP EPEEI KF+ + Sbjct: 1 MADLYGPARSPTTEPEEISTFLQQFLGNNSSSSSSKFIHHALSTPVETGSAAVEFLDCH- 59 Query: 303 LLFGRSQSGCLADGRSSCVNFSDPGGYFAKESTENAVSSVMSKRRGVSVENDLGDLSC 476 LFGRS + C A +S VN SDPGGY+ K +NAVSS +SKRRG SVE+DLGD SC Sbjct: 60 -LFGRSGTECGAGAGNSGVNLSDPGGYYVKGVVDNAVSSGISKRRGASVEDDLGDFSC 116 >ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis] gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis] Length = 312 Score = 68.6 bits (166), Expect = 8e-10 Identities = 50/119 (42%), Positives = 56/119 (47%), Gaps = 1/119 (0%) Frame = +3 Query: 123 MADLYGTATSPAPEPEEIXXXXXXXXXXXXXXXXX-KFMQNXXXXXXXXXXXXXXXXXXT 299 MADLYGT+ SPAPE EEI KF+ + Sbjct: 1 MADLYGTSPSPAPESEEISCFLHQLLHNSSSSTSSSKFVHHSFSSSHSLPPENSSP---A 57 Query: 300 ELLFGRSQSGCLADGRSSCVNFSDPGGYFAKESTENAVSSVMSKRRGVSVENDLGDLSC 476 EL FG G SS +N+SD GGYFAKES E RRGVS+ENDLGDLSC Sbjct: 58 ELFFG--------GGGSSSLNYSDQGGYFAKESAE---------RRGVSMENDLGDLSC 99 >ref|XP_002327162.1| predicted protein [Populus trichocarpa] gi|550323217|gb|ERP52705.1| basic helix-loop-helix family protein [Populus trichocarpa] Length = 310 Score = 55.5 bits (132), Expect = 7e-06 Identities = 28/40 (70%), Positives = 31/40 (77%) Frame = +3 Query: 357 VNFSDPGGYFAKESTENAVSSVMSKRRGVSVENDLGDLSC 476 VNFSDP GY+AKE NAV +SKR GVSVE+DLGD SC Sbjct: 64 VNFSDPDGYYAKEGVGNAV---VSKRGGVSVEDDLGDFSC 100