BLASTX nr result
ID: Jatropha_contig00028833
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00028833
(627 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004138687.1| PREDICTED: transcription initiation factor T... 54 1e-10
ref|XP_002515379.1| transcription factor, putative [Ricinus comm... 54 2e-10
ref|XP_004253055.1| PREDICTED: transcription initiation factor T... 54 2e-10
gb|EOY29262.1| TATA box-binding protein associated factor 10 [Th... 52 3e-10
gb|ERN05871.1| hypothetical protein AMTR_s00006p00264840 [Ambore... 50 6e-09
gb|AGL09479.1| TBP-associated factor II 15, partial [Piper nigrum] 51 3e-08
gb|AGL09484.1| TBP-associated factor II 15, partial [Xymalos mon... 42 4e-06
gb|ESR63459.1| hypothetical protein CICLE_v10009813mg [Citrus cl... 57 4e-06
>ref|XP_004138687.1| PREDICTED: transcription initiation factor TFIID subunit 10-like
[Cucumis sativus] gi|449493281|ref|XP_004159243.1|
PREDICTED: transcription initiation factor TFIID subunit
10-like [Cucumis sativus]
Length = 136
Score = 53.5 bits (127), Expect(2) = 1e-10
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 3 PTIPDELVEHYLAKSGFQCPDVRL 74
PTIPDELVEHYL KSGFQCPDVRL
Sbjct: 30 PTIPDELVEHYLGKSGFQCPDVRL 53
Score = 38.5 bits (88), Expect(2) = 1e-10
Identities = 23/33 (69%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Frame = +1
Query: 49 GFNVPMFDCR-IRLVAVATQKFVSEVAMDALQY 144
GF P D R IRLVAVATQKFV++VA DALQ+
Sbjct: 45 GFQCP--DVRLIRLVAVATQKFVADVASDALQH 75
>ref|XP_002515379.1| transcription factor, putative [Ricinus communis]
gi|223545323|gb|EEF46828.1| transcription factor,
putative [Ricinus communis]
Length = 143
Score = 53.5 bits (127), Expect(2) = 2e-10
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 3 PTIPDELVEHYLAKSGFQCPDVRL 74
PTIPDELVEHYL KSGFQCPDVRL
Sbjct: 37 PTIPDELVEHYLGKSGFQCPDVRL 60
Score = 38.1 bits (87), Expect(2) = 2e-10
Identities = 23/32 (71%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = +1
Query: 49 GFNVPMFDCR-IRLVAVATQKFVSEVAMDALQ 141
GF P D R +RLVAVATQKFV+EVA DALQ
Sbjct: 52 GFQCP--DVRLVRLVAVATQKFVAEVANDALQ 81
>ref|XP_004253055.1| PREDICTED: transcription initiation factor TFIID subunit 10-like
[Solanum lycopersicum] gi|565351013|ref|XP_006342455.1|
PREDICTED: transcription initiation factor TFIID subunit
10-like [Solanum tuberosum]
Length = 138
Score = 53.5 bits (127), Expect(2) = 2e-10
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 3 PTIPDELVEHYLAKSGFQCPDVRL 74
PTIPDELVEHYL KSGFQCPDVRL
Sbjct: 32 PTIPDELVEHYLGKSGFQCPDVRL 55
Score = 38.1 bits (87), Expect(2) = 2e-10
Identities = 22/33 (66%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Frame = +1
Query: 49 GFNVPMFDCR-IRLVAVATQKFVSEVAMDALQY 144
GF P D R IRLVAVATQKF+++VA DALQ+
Sbjct: 47 GFQCP--DVRLIRLVAVATQKFIADVATDALQH 77
>gb|EOY29262.1| TATA box-binding protein associated factor 10 [Theobroma cacao]
Length = 136
Score = 52.4 bits (124), Expect(2) = 3e-10
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 3 PTIPDELVEHYLAKSGFQCPDVRL 74
PTIPDELVEHYLAKSG QCPDVRL
Sbjct: 30 PTIPDELVEHYLAKSGVQCPDVRL 53
Score = 38.5 bits (88), Expect(2) = 3e-10
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 79 IRLVAVATQKFVSEVAMDALQY 144
IRLVAVATQKFV+EVA DALQ+
Sbjct: 54 IRLVAVATQKFVAEVASDALQH 75
>gb|ERN05871.1| hypothetical protein AMTR_s00006p00264840 [Amborella trichopoda]
Length = 132
Score = 50.4 bits (119), Expect(2) = 6e-09
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 3 PTIPDELVEHYLAKSGFQCPDVRL 74
PTIPDEL EHYL KSGFQCPD+R+
Sbjct: 26 PTIPDELAEHYLGKSGFQCPDIRV 49
Score = 36.2 bits (82), Expect(2) = 6e-09
Identities = 20/32 (62%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = +1
Query: 49 GFNVPMFDCRI-RLVAVATQKFVSEVAMDALQ 141
GF P D R+ RLVA+ATQKF++E+A DALQ
Sbjct: 41 GFQCP--DIRVTRLVALATQKFIAEIANDALQ 70
>gb|AGL09479.1| TBP-associated factor II 15, partial [Piper nigrum]
Length = 106
Score = 51.2 bits (121), Expect(2) = 3e-08
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3
Query: 3 PTIPDELVEHYLAKSGFQCPDVRL 74
PTIPDELVE+YL KSGFQCPDVRL
Sbjct: 10 PTIPDELVEYYLGKSGFQCPDVRL 33
Score = 33.1 bits (74), Expect(2) = 3e-08
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +1
Query: 49 GFNVPMFDCR-IRLVAVATQKFVSEVAMDALQY 144
GF P D R IRL+AVA QKFV++V+ D LQ+
Sbjct: 25 GFQCP--DVRLIRLIAVAAQKFVADVSNDVLQH 55
>gb|AGL09484.1| TBP-associated factor II 15, partial [Xymalos monospora]
Length = 79
Score = 42.0 bits (97), Expect(2) = 4e-06
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 21 LVEHYLAKSGFQCPDVRL 74
LVEHYLAKSGFQCPDVRL
Sbjct: 1 LVEHYLAKSGFQCPDVRL 18
Score = 35.0 bits (79), Expect(2) = 4e-06
Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +1
Query: 49 GFNVPMFDCR-IRLVAVATQKFVSEVAMDALQ 141
GF P D R +RLVAVAT KF+++VA DALQ
Sbjct: 10 GFQCP--DVRLVRLVAVATHKFIADVASDALQ 39
>gb|ESR63459.1| hypothetical protein CICLE_v10009813mg [Citrus clementina]
Length = 147
Score = 57.0 bits (136), Expect = 4e-06
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 3 PTIPDELVEHYLAKSGFQCPDVRL*NQISSCCYTKVCF 116
PTIPDELVEHYLAKSGFQCPDVRL +CC +CF
Sbjct: 33 PTIPDELVEHYLAKSGFQCPDVRL-----NCC---LCF 62