BLASTX nr result
ID: Jatropha_contig00028063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00028063
(647 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putati... 151 1e-34
ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|2... 150 3e-34
gb|EOY19062.1| C2H2 and C2HC zinc fingers superfamily protein is... 145 9e-33
gb|ESR57449.1| hypothetical protein CICLE_v10022350mg [Citrus cl... 137 3e-30
gb|EOY19064.1| C2H2 and C2HC zinc fingers superfamily protein is... 129 7e-28
gb|EOY19063.1| C2H2 and C2HC zinc fingers superfamily protein is... 129 7e-28
ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotei... 126 5e-27
gb|ESW16562.1| hypothetical protein PHAVU_007G166600g [Phaseolus... 121 2e-25
ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263... 120 3e-25
ref|XP_004495998.1| PREDICTED: U1 small nuclear ribonucleoprotei... 119 6e-25
ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795... 117 3e-24
gb|EMJ01765.1| hypothetical protein PRUPE_ppa009808mg [Prunus pe... 115 1e-23
ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790... 113 5e-23
gb|ESQ37995.1| hypothetical protein EUTSA_v10028986mg [Eutrema s... 112 7e-23
ref|XP_004290717.1| PREDICTED: U1 small nuclear ribonucleoprotei... 110 3e-22
ref|XP_006288716.1| hypothetical protein CARUB_v10002027mg [Caps... 108 1e-21
gb|AFK36549.1| unknown [Lotus japonicus] 108 2e-21
ref|NP_567250.1| C2H2 and C2HC zinc finger-containing protein [A... 105 1e-20
gb|AAO44073.1| At4g03120 [Arabidopsis thaliana] gi|110743941|dbj... 103 4e-20
emb|CBI32274.3| unnamed protein product [Vitis vinifera] 103 5e-20
>ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
gi|223540083|gb|EEF41660.1| U1 small nuclear
ribonucleoprotein C, putative [Ricinus communis]
Length = 206
Score = 151 bits (382), Expect = 1e-34
Identities = 94/175 (53%), Positives = 100/175 (57%), Gaps = 18/175 (10%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPH---LPTPI--- 165
NVR+YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAAYNQHLL QRP LPTP+
Sbjct: 33 NVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLL-QRPRLPVLPTPMMPI 91
Query: 166 ---------XXXXXXXXXXXXXXXXXXXTPGYVSGPT-PQMVAPPGASSLSGQVNGIQRP 315
PGY+S P P MVAPPGA SL GQVNG+ RP
Sbjct: 92 PGSAQLPANTPLMPGIRPPPVLPRPVPAAPGYMSSPAMPPMVAPPGAPSLPGQVNGLPRP 151
Query: 316 PMII--XXXXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSFANTPAPGANH 474
PM I VPP +YQTN A T+ GFDSF NTP ANH
Sbjct: 152 PMSIPPATVPGSAAVAPPSGAPSMVPPASYQTNPAPPTSAGFDSFNNTPNLEANH 206
>ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|222841602|gb|EEE79149.1|
proline-rich family protein [Populus trichocarpa]
Length = 202
Score = 150 bits (379), Expect = 3e-34
Identities = 89/170 (52%), Positives = 99/170 (58%), Gaps = 13/170 (7%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPH---LPTPI--- 165
NVR YYQQFEEQQTQS+IDQRIKEHLGQ AAFQQVGAAYNQHL+ QRP LPTP+
Sbjct: 33 NVRIYYQQFEEQQTQSIIDQRIKEHLGQTAAFQQVGAAYNQHLMVQRPRLPVLPTPVMPI 92
Query: 166 ---XXXXXXXXXXXXXXXXXXXTPGYVSGP-TPQMVAPPGASSLSGQVNGIQRPPMIIXX 333
PGY++ P P M+APPGA SL GQ+NGI RPP +I
Sbjct: 93 GGNNAPLFPGMRPPVLPRPMPGAPGYMNPPMMPPMMAPPGAPSLPGQMNGIPRPPTMIAQ 152
Query: 334 XXXXXXXXXXXXXXXXV--PPPTYQTNSAVSTNGGFDSF-ANTPAPGANH 474
PP TYQ N A +T+GGFDSF N AP ANH
Sbjct: 153 PNVPGSTAAPTPSGPPSMGPPVTYQANQAATTSGGFDSFNVNAAAPEANH 202
>gb|EOY19062.1| C2H2 and C2HC zinc fingers superfamily protein isoform 1 [Theobroma
cacao]
Length = 208
Score = 145 bits (366), Expect = 9e-33
Identities = 87/176 (49%), Positives = 95/176 (53%), Gaps = 19/176 (10%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPHLPT-------- 159
NVR YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAA+NQHL+AQRP LP
Sbjct: 33 NVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLMAQRPRLPVLPTPVMPI 92
Query: 160 ------PIXXXXXXXXXXXXXXXXXXXTPGYVSGP-TPQMVAPPGASSLSGQVNGIQRPP 318
P+ PGYV P P MVAPPGA SL GQ+NG+ RPP
Sbjct: 93 PGAAPLPMNQPMVPGIRPPVLPRPLPGPPGYVPAPGMPPMVAPPGAPSLPGQINGVPRPP 152
Query: 319 M---IIXXXXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSF-ANTPAPGANH 474
+ V P +YQTN A T GGFD+F AN ANH
Sbjct: 153 TLAPLTTVPGTATTPTSSNAAPTMVTPASYQTNPAAPTGGGFDNFNANAQPSEANH 208
>gb|ESR57449.1| hypothetical protein CICLE_v10022350mg [Citrus clementina]
Length = 197
Score = 137 bits (344), Expect = 3e-30
Identities = 84/169 (49%), Positives = 91/169 (53%), Gaps = 12/169 (7%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPH---LPTPI--- 165
NVR+YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAAYNQHLLAQRP LPTP+
Sbjct: 33 NVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLLAQRPRLPVLPTPVMPM 92
Query: 166 --XXXXXXXXXXXXXXXXXXXTPGYVSGP-TPQMVAPPGASSLSGQVNGIQRPPMII--- 327
PGYVS P P M+APPGA S GQ+NG RPP ++
Sbjct: 93 TGSAPLVPGMRPPVLPRPGPSPPGYVSAPGMPPMMAPPGAPSAPGQLNGFPRPPAVMNPT 152
Query: 328 XXXXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSFANTPAPGANH 474
P TYQ N V T+G N AP NH
Sbjct: 153 AVSGSAAPPASSSGAPSMATPQTYQANPTVPTSGNL----NAQAPEMNH 197
>gb|EOY19064.1| C2H2 and C2HC zinc fingers superfamily protein isoform 3 [Theobroma
cacao]
Length = 211
Score = 129 bits (324), Expect = 7e-28
Identities = 77/158 (48%), Positives = 84/158 (53%), Gaps = 18/158 (11%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPHLPT-------- 159
NVR YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAA+NQHL+AQRP LP
Sbjct: 49 NVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLMAQRPRLPVLPTPVMPI 108
Query: 160 ------PIXXXXXXXXXXXXXXXXXXXTPGYVSGP-TPQMVAPPGASSLSGQVNGIQRPP 318
P+ PGYV P P MVAPPGA SL GQ+NG+ RPP
Sbjct: 109 PGAAPLPMNQPMVPGIRPPVLPRPLPGPPGYVPAPGMPPMVAPPGAPSLPGQINGVPRPP 168
Query: 319 M---IIXXXXXXXXXXXXXXXXXXVPPPTYQTNSAVST 423
+ V P +YQTN A T
Sbjct: 169 TLAPLTTVPGTATTPTSSNAAPTMVTPASYQTNPAAPT 206
>gb|EOY19063.1| C2H2 and C2HC zinc fingers superfamily protein isoform 2 [Theobroma
cacao]
Length = 195
Score = 129 bits (324), Expect = 7e-28
Identities = 77/158 (48%), Positives = 84/158 (53%), Gaps = 18/158 (11%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPHLPT-------- 159
NVR YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAA+NQHL+AQRP LP
Sbjct: 33 NVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLMAQRPRLPVLPTPVMPI 92
Query: 160 ------PIXXXXXXXXXXXXXXXXXXXTPGYVSGP-TPQMVAPPGASSLSGQVNGIQRPP 318
P+ PGYV P P MVAPPGA SL GQ+NG+ RPP
Sbjct: 93 PGAAPLPMNQPMVPGIRPPVLPRPLPGPPGYVPAPGMPPMVAPPGAPSLPGQINGVPRPP 152
Query: 319 M---IIXXXXXXXXXXXXXXXXXXVPPPTYQTNSAVST 423
+ V P +YQTN A T
Sbjct: 153 TLAPLTTVPGTATTPTSSNAAPTMVTPASYQTNPAAPT 190
>ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cucumis
sativus] gi|449491514|ref|XP_004158922.1| PREDICTED: U1
small nuclear ribonucleoprotein C-like [Cucumis sativus]
Length = 197
Score = 126 bits (317), Expect = 5e-27
Identities = 81/167 (48%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPH---LPTPI--- 165
NVR+YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAA+NQHLL QRP LPTP+
Sbjct: 33 NVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQRPRLPVLPTPVMPG 92
Query: 166 -XXXXXXXXXXXXXXXXXXXTPGYVSGPT-PQMVAPPGASSLSGQVNGIQRPPMIIXXXX 339
PGY+ PT P M+APPGA + GQVN RPP
Sbjct: 93 AAPGLMPGIRPPVLPRPIPGAPGYLPTPTMPPMMAPPGA-PIPGQVNIPSRPPP-PAPLP 150
Query: 340 XXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSFAN--TPAPGANH 474
P TYQ N A +GG+DSF + P+ +NH
Sbjct: 151 GSAPQPSSTNGAPLAAPSTYQANPAAPGSGGYDSFTSMAQPSSESNH 197
>gb|ESW16562.1| hypothetical protein PHAVU_007G166600g [Phaseolus vulgaris]
Length = 204
Score = 121 bits (303), Expect = 2e-25
Identities = 76/173 (43%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPHLP-------TP 162
NVR YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVG AYN H++ QRP+LP P
Sbjct: 33 NVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYN-HMMVQRPNLPPVLPPPRLP 91
Query: 163 IXXXXXXXXXXXXXXXXXXXT-----PGYVSGPT-PQMVAPPGASSLSGQVNGIQRPPMI 324
I PGYVS PT P M+ PPGA + GQ+N + RPP +
Sbjct: 92 IPGNAQVPGSQPLMPGMRPPVFPRPPPGYVSAPTMPPMLPPPGAPQMPGQLNTLPRPPSL 151
Query: 325 I--XXXXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSF-ANTPAPGANH 474
V YQ N + ++GG+D++ A+ AP NH
Sbjct: 152 APPPTAPGSTAAPASNGAPSMVSSAMYQANPSAPSSGGYDNYNASAQAPDGNH 204
>ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
small nuclear ribonucleoprotein C; Short=U1 snRNP C;
Short=U1-C; Short=U1C
Length = 213
Score = 120 bits (301), Expect = 3e-25
Identities = 79/181 (43%), Positives = 91/181 (50%), Gaps = 24/181 (13%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLA-----QRPHLPT--- 159
NVR+YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAAYNQHL++ RP LP
Sbjct: 33 NVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLVSFPGNPPRPRLPVLPT 92
Query: 160 -----------PIXXXXXXXXXXXXXXXXXXXTPGYVSGP-TPQMVAPPGASSL-SGQVN 300
P+ PGY+ P P M+APPGA S+ +N
Sbjct: 93 PGMPVAGSAPLPMNSPLVPGMRPPVLPRPVPGAPGYMPAPGMPSMMAPPGAPSMPMPPLN 152
Query: 301 GIQRPPM--IIXXXXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSF-ANTPAPGAN 471
+ RPP + + P YQ N A T+GGFDSF N P AN
Sbjct: 153 SLPRPPTMNVPPAVPGSTSTPTSGGAPSMMTQPMYQANPAGPTSGGFDSFNINAQGPEAN 212
Query: 472 H 474
H
Sbjct: 213 H 213
>ref|XP_004495998.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
[Cicer arietinum] gi|502117896|ref|XP_004495999.1|
PREDICTED: U1 small nuclear ribonucleoprotein C-like
isoform X2 [Cicer arietinum]
gi|502117898|ref|XP_004496000.1| PREDICTED: U1 small
nuclear ribonucleoprotein C-like isoform X3 [Cicer
arietinum] gi|502117900|ref|XP_004496001.1| PREDICTED:
U1 small nuclear ribonucleoprotein C-like isoform X4
[Cicer arietinum]
Length = 200
Score = 119 bits (299), Expect = 6e-25
Identities = 76/168 (45%), Positives = 90/168 (53%), Gaps = 12/168 (7%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPHLPT-------P 162
NVR+YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVG A+N HL+ QRP+LP P
Sbjct: 33 NVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAFN-HLMVQRPNLPPVMPPPRFP 91
Query: 163 I-XXXXXXXXXXXXXXXXXXXTPGYVSGPT-PQMVAPPGASSLSGQVNGIQRPPMII--X 330
I PGYVS PT PQM+ PPGA + GQ+ + RPP +
Sbjct: 92 IPGTQPMMPGVRPLMPRPIPGPPGYVSAPTMPQMIPPPGAPQIPGQLITLPRPPSLAPPP 151
Query: 331 XXXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSF-ANTPAPGAN 471
YQTN ++GG+D++ AN AP N
Sbjct: 152 TAPGSTAAPPSNGAPSMASSAMYQTNPPAPSSGGYDNYNANAQAPEGN 199
>ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795821 [Glycine max]
Length = 206
Score = 117 bits (293), Expect = 3e-24
Identities = 75/175 (42%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPHLPTPI------ 165
NVR YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVG AYN HL+ QRP+LP +
Sbjct: 33 NVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYN-HLMVQRPNLPPVLPPPRLP 91
Query: 166 --------XXXXXXXXXXXXXXXXXXXTPGYVSGPT-PQMVAPPGASSLSGQVNGIQRPP 318
PGYVS PT P M+ PPGA GQ+N I RPP
Sbjct: 92 IPGNAQIPGSQPLMPGMRPPVFPRPPGAPGYVSAPTMPPMLPPPGAPQAPGQLNTIPRPP 151
Query: 319 MII--XXXXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSF-ANTPAPGANH 474
+ V YQ N ++G +D++ A+ AP NH
Sbjct: 152 SLAPPPAVPGSTAAPASNGAPSMVSSAMYQANPPAPSSGSYDNYNASAQAPEGNH 206
>gb|EMJ01765.1| hypothetical protein PRUPE_ppa009808mg [Prunus persica]
Length = 276
Score = 115 bits (287), Expect = 1e-23
Identities = 74/174 (42%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQN----AAFQQVGAAYNQHLLAQRPHLPT---- 159
NVR YYQ+FEEQQTQSL+DQRIKEHLGQ+ AA+ QVGAAYNQHL+AQRP LP
Sbjct: 102 NVRLYYQKFEEQQTQSLVDQRIKEHLGQHLGQAAAYGQVGAAYNQHLMAQRPRLPVLPTP 161
Query: 160 --PIXXXXXXXXXXXXXXXXXXXTPGYVSG-----PTPQMVAPPGASSLSGQVNGIQRPP 318
P PG G P M+APPGA + GQ+N RPP
Sbjct: 162 GMPQMPGGAQMVPGMRPPVLPRPMPGAPGGYGSAPPMMPMMAPPGAPGMPGQLNVPMRPP 221
Query: 319 MI--IXXXXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSF-ANTPAPGAN 471
+ PPP YQ+N T+GG+D F NT P ++
Sbjct: 222 TMNPPPTVAGSTAPNASVGVPSMAPPPMYQSNQTPPTSGGYDGFNPNTQPPDSS 275
>ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790892 [Glycine max]
Length = 206
Score = 113 bits (282), Expect = 5e-23
Identities = 75/177 (42%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPHLPTPI------ 165
NVR YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVG AYN HL+ QRP+LP +
Sbjct: 33 NVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYN-HLMVQRPNLPPVLPPPRLP 91
Query: 166 --------XXXXXXXXXXXXXXXXXXXTPGYVSGPT-PQMVAPPGASSLSGQVNGIQRPP 318
PGYVS T P M+ PPGA + GQ+N I RPP
Sbjct: 92 IPGNAQIPGGQPLMQGMRPPVFPRPPGAPGYVSAHTMPPMLPPPGAPQVPGQLNTIPRPP 151
Query: 319 MIIXXXXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSF-------ANTPAPGA 468
+ PPPT ++A + G S AN PAP +
Sbjct: 152 SL-------------------APPPTVPGSTATPASNGAPSMVSSAMYQANPPAPSS 189
>gb|ESQ37995.1| hypothetical protein EUTSA_v10028986mg [Eutrema salsugineum]
Length = 193
Score = 112 bits (281), Expect = 7e-23
Identities = 77/158 (48%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPHLP-TPIXXXXX 180
NVR YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGA +NQH+LA RP LP P
Sbjct: 33 NVRIYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAVFNQHMLA-RPRLPMMPPPGSMP 91
Query: 181 XXXXXXXXXXXXXXTPGYVSGP-TPQMVAPPGASSLSGQVNGIQRPPMIIXXXXXXXXXX 357
GY+ P PQM+APPGA NGI RPP +
Sbjct: 92 MGMRPPVLPRPMMPGQGYMPPPGVPQMMAPPGAPLPPPPQNGILRPPGMAPLPGQGGAPP 151
Query: 358 XXXXXXXXVPPPTYQTNSAVSTNGGFDSFAN-TPAPGA 468
PPP Y TN A + G SF N P PGA
Sbjct: 152 PNYNGSLP-PPPPYHTNPAAAPPSG--SFNNPNPNPGA 186
>ref|XP_004290717.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Fragaria
vesca subsp. vesca]
Length = 200
Score = 110 bits (275), Expect = 3e-22
Identities = 68/157 (43%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLA--QRPHLPTPIXXXX 177
NVR YYQQFEEQQ QSLIDQ+IKE +GQNAA+ QVGAAYNQHL+A + P LP P+
Sbjct: 33 NVRQYYQQFEEQQNQSLIDQKIKELIGQNAAYGQVGAAYNQHLMARPRMPILPNPMMQQM 92
Query: 178 XXXXXXXXXXXXXXXTPGYVSG------PTPQMVAPPGASSLSGQVNGIQRPPMII--XX 333
P G P QM+APPGA + GQVN RPP +
Sbjct: 93 PGGPPMAPGGIRIPVLPRPPMGAPGVYQPMMQMMAPPGAPGMPGQVNMPMRPPTLSAPPS 152
Query: 334 XXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSF 444
PP YQ N + GG+DSF
Sbjct: 153 VPGSAPPNASNGAPSVAAPPMYQPNPTAPSTGGYDSF 189
>ref|XP_006288716.1| hypothetical protein CARUB_v10002027mg [Capsella rubella]
gi|482557422|gb|EOA21614.1| hypothetical protein
CARUB_v10002027mg [Capsella rubella]
Length = 193
Score = 108 bits (270), Expect = 1e-21
Identities = 71/159 (44%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQ-RPHLPTPIXXXXX 180
NVR YYQQFEEQQTQSLIDQRIKEHLGQ F QVGA +NQH+LA+ RP + P
Sbjct: 33 NVRIYYQQFEEQQTQSLIDQRIKEHLGQTGGFPQVGAVFNQHMLARPRPPMMLPPGSMPM 92
Query: 181 XXXXXXXXXXXXXXTP--GYVSGP-TPQMVAPPGASSLSGQVNGIQRPPMIIXXXXXXXX 351
P GY+ P PQM+APPGA NGI RPP +
Sbjct: 93 GMRPPVLPRPMMPGMPGQGYMPPPGVPQMMAPPGAPLPPPPQNGILRPPGMAPLPGQGGG 152
Query: 352 XXXXXXXXXXVPPPTYQTNSAVSTNGGFDSFANTPAPGA 468
PPP Y N A + +G F N P PGA
Sbjct: 153 PPPNYNGPPP-PPPPYHPNPAAAPSGSF----NNPNPGA 186
>gb|AFK36549.1| unknown [Lotus japonicus]
Length = 192
Score = 108 bits (269), Expect = 2e-21
Identities = 72/163 (44%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPHLPTPIXXXXXX 183
NVRNYYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVG AYN HL+ RP P P+
Sbjct: 33 NVRNYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYN-HLMVPRPGGP-PLLPMPQP 90
Query: 184 XXXXXXXXXXXXXTPGYVSGPTPQMVAP---PGASSLSGQVNGIQRPPMII--XXXXXXX 348
P + G P M P PGA + GQ+N I RPP
Sbjct: 91 RFPMPGNVQMPGGQP-LMPGMRPLMPLPRPVPGAPHVPGQLNAIPRPPSFAPPTTAPGST 149
Query: 349 XXXXXXXXXXXVPPPTYQTNSAVSTNGGFDSF-ANTPAPGANH 474
V YQ N + ++GG+D++ AN AP NH
Sbjct: 150 AAPASNGAPSMVSSAMYQPNPSAPSSGGYDNYNANAQAPDGNH 192
>ref|NP_567250.1| C2H2 and C2HC zinc finger-containing protein [Arabidopsis thaliana]
gi|75217907|sp|Q56XE4.1|RU1C_ARATH RecName: Full=U1
small nuclear ribonucleoprotein C; Short=U1 snRNP C;
Short=U1-C; Short=U1C gi|62320807|dbj|BAD93742.1|
putative C-type U1 snRNP [Arabidopsis thaliana]
gi|332656876|gb|AEE82276.1| C2H2 and C2HC zinc
finger-containing protein [Arabidopsis thaliana]
Length = 207
Score = 105 bits (262), Expect = 1e-20
Identities = 71/169 (42%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPHLPTPIXXXXXX 183
NVR YYQQFEEQQTQSLIDQRIKEHLGQ +QQVGA +NQH+LA RP P +
Sbjct: 33 NVRIYYQQFEEQQTQSLIDQRIKEHLGQTGGYQQVGAVFNQHMLA-RPRPPMMLPPGSMP 91
Query: 184 XXXXXXXXXXXXXTP-GYVSGP-TPQMVAPPGASSLSGQVNGIQRPPMII---------- 327
P GY+ P PQM+APPGA NGI RPP +
Sbjct: 92 MGMRPPVLPRPMMPPQGYMPPPGVPQMMAPPGAPLPPPPQNGILRPPGMAPIPGQGGGPP 151
Query: 328 -XXXXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDS-FANTPAPGA 468
PPP Y TN A +G F++ N P P A
Sbjct: 152 GMAPIPGQGGGPPPNYNGLPPPPPYHTNPAAPPSGNFNNPNLNNPNPSA 200
>gb|AAO44073.1| At4g03120 [Arabidopsis thaliana] gi|110743941|dbj|BAE99804.1|
putative C-type U1 snRNP [Arabidopsis thaliana]
Length = 207
Score = 103 bits (257), Expect = 4e-20
Identities = 70/169 (41%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLAQRPHLPTPIXXXXXX 183
NVR Y+QQFEEQQTQSLIDQRIKEHLGQ +QQVGA +NQH+LA RP P +
Sbjct: 33 NVRIYHQQFEEQQTQSLIDQRIKEHLGQTGGYQQVGAVFNQHMLA-RPRPPMMLPPGSMP 91
Query: 184 XXXXXXXXXXXXXTP-GYVSGP-TPQMVAPPGASSLSGQVNGIQRPPMII---------- 327
P GY+ P PQM+APPGA NGI RPP +
Sbjct: 92 MGMRPPVLPRPMMPPQGYMPPPGVPQMMAPPGAPLPPPPQNGILRPPGMAPIPGQGGGPP 151
Query: 328 -XXXXXXXXXXXXXXXXXXVPPPTYQTNSAVSTNGGFDS-FANTPAPGA 468
PPP Y TN A +G F++ N P P A
Sbjct: 152 GMAPIPGQGGGPPPNYNGLPPPPPYHTNPAAPPSGNFNNPNLNNPNPSA 200
>emb|CBI32274.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 103 bits (256), Expect = 5e-20
Identities = 62/126 (49%), Positives = 71/126 (56%), Gaps = 21/126 (16%)
Frame = +1
Query: 4 NVRNYYQQFEEQQTQSLIDQRIKEHLGQNAAFQQVGAAYNQHLLA-----QRPHLPT--- 159
NVR+YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAAYNQHL++ RP LP
Sbjct: 33 NVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLVSFPGNPPRPRLPVLPT 92
Query: 160 -----------PIXXXXXXXXXXXXXXXXXXXTPGYVSGP-TPQMVAPPGASSL-SGQVN 300
P+ PGY+ P P M+APPGA S+ +N
Sbjct: 93 PGMPVAGSAPLPMNSPLVPGMRPPVLPRPVPGAPGYMPAPGMPSMMAPPGAPSMPMPPLN 152
Query: 301 GIQRPP 318
+ RPP
Sbjct: 153 SLPRPP 158