BLASTX nr result
ID: Jatropha_contig00027872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00027872
(686 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE86385.2| hypothetical protein POPTR_0004s08580g [Populus t... 199 6e-49
ref|XP_002305874.1| predicted protein [Populus trichocarpa] 192 8e-47
gb|ESR43813.1| hypothetical protein CICLE_v10010990mg [Citrus cl... 186 4e-45
ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ri... 173 4e-41
gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform ... 167 3e-39
gb|EOY03914.1| DNA repair protein xp-C / rad4, putative isoform ... 167 3e-39
emb|CBI33509.3| unnamed protein product [Vitis vinifera] 163 4e-38
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ... 163 4e-38
ref|XP_006364632.1| PREDICTED: DNA repair protein complementing ... 158 1e-36
ref|XP_006364631.1| PREDICTED: DNA repair protein complementing ... 158 1e-36
ref|XP_004250530.1| PREDICTED: DNA repair protein complementing ... 156 6e-36
gb|EMJ18890.1| hypothetical protein PRUPE_ppa001034mg [Prunus pe... 154 2e-35
ref|XP_004289443.1| PREDICTED: DNA repair protein complementing ... 146 6e-33
ref|XP_003572211.1| PREDICTED: DNA repair protein complementing ... 142 7e-32
ref|NP_197166.2| DNA repair protein Rad4 [Arabidopsis thaliana] ... 140 3e-31
ref|XP_003616296.1| DNA repair protein complementing XP-C cells-... 139 6e-31
gb|ERM94149.1| hypothetical protein AMTR_s00010p00163020 [Ambore... 138 1e-30
ref|XP_004155756.1| PREDICTED: DNA repair protein complementing ... 137 2e-30
ref|XP_004140360.1| PREDICTED: DNA repair protein complementing ... 137 2e-30
ref|XP_006287057.1| hypothetical protein CARUB_v10000205mg [Caps... 137 3e-30
>gb|EEE86385.2| hypothetical protein POPTR_0004s08580g [Populus trichocarpa]
Length = 898
Score = 199 bits (506), Expect = 6e-49
Identities = 125/249 (50%), Positives = 143/249 (57%), Gaps = 22/249 (8%)
Frame = +1
Query: 4 SATKMRRGKENAM----DTGKESLAEMSIDAVDKLXXXXXXXXXXXXXXXXKQ------- 150
S K GKE+ + D ESLA+MS +AVDKL +
Sbjct: 5 SNNKQSSGKESTVSAIRDVDSESLADMSNEAVDKLVRRVKGRGSSGKKKQDNRLQCDSAA 64
Query: 151 -----------RVDDTRVTWNDLDNSIDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDS 297
+V D RVTWNDLD + ++S + E DDIDWEDGS+ I
Sbjct: 65 TGENGLKSNGKQVVDARVTWNDLDARGFQTTFQES------DQEMDDIDWEDGSSSILGH 118
Query: 298 LNNDNHVGDDVSRTVTIEFSESPDSAKRKPIRRATAEEKELAELVHKVHLLCLLARGRIV 477
+ N H GD + R VTIEFSESPDSAKRKPIRRATAEEK LAELVHKVHLLCLLARGRI+
Sbjct: 119 VKN--HPGDGI-REVTIEFSESPDSAKRKPIRRATAEEKGLAELVHKVHLLCLLARGRII 175
Query: 478 DSACDDPLIQXXXXXXXXXXXXKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQS 657
D ACDDPLIQ KL A +LSP+ WFHNNF + SS SEKRSF S
Sbjct: 176 DHACDDPLIQASLLSILPAHLSNTLGDPKLHAKALSPLAHWFHNNFHVASSVSEKRSFHS 235
Query: 658 ALAFALETR 684
AL+ ALETR
Sbjct: 236 ALSCALETR 244
>ref|XP_002305874.1| predicted protein [Populus trichocarpa]
Length = 868
Score = 192 bits (488), Expect = 8e-47
Identities = 108/179 (60%), Positives = 122/179 (68%)
Frame = +1
Query: 148 QRVDDTRVTWNDLDNSIDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDSLNNDNHVGDD 327
++V D RVTWNDLD + ++S + E DDIDWEDGS+ I + N H GD
Sbjct: 45 KQVVDARVTWNDLDARGFQTTFQES------DQEMDDIDWEDGSSSILGHVKN--HPGDG 96
Query: 328 VSRTVTIEFSESPDSAKRKPIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQ 507
+ R VTIEFSESPDSAKRKPIRRATAEEK LAELVHKVHLLCLLARGRI+D ACDDPLIQ
Sbjct: 97 I-REVTIEFSESPDSAKRKPIRRATAEEKGLAELVHKVHLLCLLARGRIIDHACDDPLIQ 155
Query: 508 XXXXXXXXXXXXKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALETR 684
KL A +LSP+ WFHNNF + SS SEKRSF SAL+ ALETR
Sbjct: 156 ASLLSILPAHLSNTLGDPKLHAKALSPLAHWFHNNFHVASSVSEKRSFHSALSCALETR 214
>gb|ESR43813.1| hypothetical protein CICLE_v10010990mg [Citrus clementina]
Length = 974
Score = 186 bits (473), Expect = 4e-45
Identities = 104/193 (53%), Positives = 132/193 (68%), Gaps = 13/193 (6%)
Frame = +1
Query: 145 KQRVDDTRVTWNDLD-------------NSIDGGSLKDSLRNSEGEAETDDIDWEDGSTP 285
KQ VD RVTW+D+D +D G L+D++ +G E D DWEDGS P
Sbjct: 80 KQEVDK-RVTWSDVDAHGCSRDAMGNTLREVDEGRLQDNVL--DGGEEMYDSDWEDGSIP 136
Query: 286 IKDSLNNDNHVGDDVSRTVTIEFSESPDSAKRKPIRRATAEEKELAELVHKVHLLCLLAR 465
+ + + +NH D+ + VTIEF ++ DS +KP+RRA+AE+KELAELVHKVHLLCLLAR
Sbjct: 137 V--ACSKENHPESDI-KGVTIEF-DAADSVTKKPVRRASAEDKELAELVHKVHLLCLLAR 192
Query: 466 GRIVDSACDDPLIQXXXXXXXXXXXXKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKR 645
GR++DS CDDPLIQ KI EVSKL+AN+LSP+VSWFH+NF +RSS S +R
Sbjct: 193 GRLIDSVCDDPLIQASLLSLLPSYLLKISEVSKLTANALSPIVSWFHDNFHVRSSVSTRR 252
Query: 646 SFQSALAFALETR 684
SF SALA ALE+R
Sbjct: 253 SFHSALAHALESR 265
>ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ricinus communis]
gi|223528425|gb|EEF30459.1| DNA repair protein xp-C /
rad4, putative [Ricinus communis]
Length = 683
Score = 173 bits (439), Expect = 4e-41
Identities = 88/114 (77%), Positives = 95/114 (83%)
Frame = +1
Query: 340 VTIEFSESPDSAKRKPIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXX 519
+TIEFSESPDS K+KPIRRATA+EKELAELVHKVHLLCLLARGRI+DSACDDPLIQ
Sbjct: 13 LTIEFSESPDSVKKKPIRRATAQEKELAELVHKVHLLCLLARGRIIDSACDDPLIQASLL 72
Query: 520 XXXXXXXXKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALET 681
KI VSKLSAN+LSP+VSWFHNNF +RSS EKR FQSALAFALET
Sbjct: 73 SLLPAHLLKISGVSKLSANALSPLVSWFHNNFHVRSSFGEKRPFQSALAFALET 126
>gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma
cacao]
Length = 908
Score = 167 bits (422), Expect = 3e-39
Identities = 87/163 (53%), Positives = 113/163 (69%)
Frame = +1
Query: 196 IDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTVTIEFSESPDSA 375
+D GS D+L + + +D DWEDGS P D ++N + + +TIEF E SA
Sbjct: 24 VDVGSYVDNL--FDDSEDMNDSDWEDGSIPKLDPVDNSPK---ERMKGLTIEFDEPSGSA 78
Query: 376 KRKPIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXXXXXXXXXXKIPE 555
RKP+RRA+AE+KE+AELVHKVHLLCLLARGR++D+ACDDPLIQ KI
Sbjct: 79 GRKPVRRASAEDKEIAELVHKVHLLCLLARGRLIDNACDDPLIQASLLSLVPTHLSKISG 138
Query: 556 VSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALETR 684
VS +++N+LSP+V+WFHNNF +RS +RSF +ALAFALETR
Sbjct: 139 VSNITSNALSPLVTWFHNNFHVRSLVRAERSFHTALAFALETR 181
>gb|EOY03914.1| DNA repair protein xp-C / rad4, putative isoform 1 [Theobroma
cacao]
Length = 974
Score = 167 bits (422), Expect = 3e-39
Identities = 87/163 (53%), Positives = 113/163 (69%)
Frame = +1
Query: 196 IDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTVTIEFSESPDSA 375
+D GS D+L + + +D DWEDGS P D ++N + + +TIEF E SA
Sbjct: 90 VDVGSYVDNL--FDDSEDMNDSDWEDGSIPKLDPVDNSPK---ERMKGLTIEFDEPSGSA 144
Query: 376 KRKPIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXXXXXXXXXXKIPE 555
RKP+RRA+AE+KE+AELVHKVHLLCLLARGR++D+ACDDPLIQ KI
Sbjct: 145 GRKPVRRASAEDKEIAELVHKVHLLCLLARGRLIDNACDDPLIQASLLSLVPTHLSKISG 204
Query: 556 VSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALETR 684
VS +++N+LSP+V+WFHNNF +RS +RSF +ALAFALETR
Sbjct: 205 VSNITSNALSPLVTWFHNNFHVRSLVRAERSFHTALAFALETR 247
>emb|CBI33509.3| unnamed protein product [Vitis vinifera]
Length = 866
Score = 163 bits (413), Expect = 4e-38
Identities = 91/186 (48%), Positives = 123/186 (66%), Gaps = 15/186 (8%)
Frame = +1
Query: 166 RVTWNDLDNS---------------IDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDSL 300
RVTWN LD+ +D S +D+ NS GE + ++ DWE+GS P DS+
Sbjct: 82 RVTWNALDSEGCGRSAIGRSTLEKEVDEKSSQDTYLNS-GE-DINESDWEEGSIPTLDSV 139
Query: 301 NNDNHVGDDVSRTVTIEFSESPDSAKRKPIRRATAEEKELAELVHKVHLLCLLARGRIVD 480
+N + G + VTIE S DS+++KPIRRA+AE+KELAELVHKVHLLCLLARGR++D
Sbjct: 140 DNHQNAG---IKEVTIELSGLLDSSQQKPIRRASAEDKELAELVHKVHLLCLLARGRLID 196
Query: 481 SACDDPLIQXXXXXXXXXXXXKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSA 660
SAC+DPL+Q KI E+ +L+AN+ + +V WFH+NFR+RS +S +R S+
Sbjct: 197 SACNDPLVQASLLSLLPADLLKISEIPRLTANAFTLLVRWFHDNFRVRSPSSVERPLHSS 256
Query: 661 LAFALE 678
LAFALE
Sbjct: 257 LAFALE 262
>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
vinifera]
Length = 1103
Score = 163 bits (413), Expect = 4e-38
Identities = 91/186 (48%), Positives = 123/186 (66%), Gaps = 15/186 (8%)
Frame = +1
Query: 166 RVTWNDLDNS---------------IDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDSL 300
RVTWN LD+ +D S +D+ NS GE + ++ DWE+GS P DS+
Sbjct: 242 RVTWNALDSEGCGRSAIGRSTLEKEVDEKSSQDTYLNS-GE-DINESDWEEGSIPTLDSV 299
Query: 301 NNDNHVGDDVSRTVTIEFSESPDSAKRKPIRRATAEEKELAELVHKVHLLCLLARGRIVD 480
+N + G + VTIE S DS+++KPIRRA+AE+KELAELVHKVHLLCLLARGR++D
Sbjct: 300 DNHQNAG---IKEVTIELSGLLDSSQQKPIRRASAEDKELAELVHKVHLLCLLARGRLID 356
Query: 481 SACDDPLIQXXXXXXXXXXXXKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSA 660
SAC+DPL+Q KI E+ +L+AN+ + +V WFH+NFR+RS +S +R S+
Sbjct: 357 SACNDPLVQASLLSLLPADLLKISEIPRLTANAFTLLVRWFHDNFRVRSPSSVERPLHSS 416
Query: 661 LAFALE 678
LAFALE
Sbjct: 417 LAFALE 422
>ref|XP_006364632.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X2 [Solanum tuberosum]
Length = 903
Score = 158 bits (400), Expect = 1e-36
Identities = 79/163 (48%), Positives = 112/163 (68%)
Frame = +1
Query: 196 IDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTVTIEFSESPDSA 375
++ GS ++ E E E D IDWEDG D+L ++++V +D VT+EF +PD +
Sbjct: 95 VENGSTDVQCQSIEREDELDGIDWEDGPV---DTLKSESNVKEDTINGVTVEFDATPDPS 151
Query: 376 KRKPIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXXXXXXXXXXKIPE 555
K+K +RRATAEEKELAELVHKV+LLCLLARGR+VDSAC+DPLIQ K+ +
Sbjct: 152 KQKTVRRATAEEKELAELVHKVNLLCLLARGRLVDSACNDPLIQASLLSLLPAHLLKLTD 211
Query: 556 VSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALETR 684
KL+A +L+P+V+W H++FR+R + ++ F SALA LE++
Sbjct: 212 APKLTAKALAPLVNWCHSHFRVRGANDTEKPFHSALASTLESQ 254
>ref|XP_006364631.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X1 [Solanum tuberosum]
Length = 928
Score = 158 bits (400), Expect = 1e-36
Identities = 79/163 (48%), Positives = 112/163 (68%)
Frame = +1
Query: 196 IDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTVTIEFSESPDSA 375
++ GS ++ E E E D IDWEDG D+L ++++V +D VT+EF +PD +
Sbjct: 120 VENGSTDVQCQSIEREDELDGIDWEDGPV---DTLKSESNVKEDTINGVTVEFDATPDPS 176
Query: 376 KRKPIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXXXXXXXXXXKIPE 555
K+K +RRATAEEKELAELVHKV+LLCLLARGR+VDSAC+DPLIQ K+ +
Sbjct: 177 KQKTVRRATAEEKELAELVHKVNLLCLLARGRLVDSACNDPLIQASLLSLLPAHLLKLTD 236
Query: 556 VSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALETR 684
KL+A +L+P+V+W H++FR+R + ++ F SALA LE++
Sbjct: 237 APKLTAKALAPLVNWCHSHFRVRGANDTEKPFHSALASTLESQ 279
>ref|XP_004250530.1| PREDICTED: DNA repair protein complementing XP-C cells-like
[Solanum lycopersicum]
Length = 928
Score = 156 bits (394), Expect = 6e-36
Identities = 78/168 (46%), Positives = 113/168 (67%)
Frame = +1
Query: 181 DLDNSIDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTVTIEFSE 360
++ + ++ GS ++ E E E D IDWEDG D+L ++++V +D VT+EF
Sbjct: 115 NVPSEVEHGSTDVQCQSIEREDELDGIDWEDGPV---DTLKSESNVKEDTINGVTVEFDA 171
Query: 361 SPDSAKRKPIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXXXXXXXXX 540
PD +K+K +RRATA+EKELAELVHKV+LLCLLARGR VDSAC+DPLIQ
Sbjct: 172 PPDPSKQKTVRRATAQEKELAELVHKVNLLCLLARGRFVDSACNDPLIQASLLSLLPAHL 231
Query: 541 XKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALETR 684
K+ + KL+A +L+P+V+W H++FR+R + ++ F SALA LE++
Sbjct: 232 LKLTDAPKLTAKALAPLVNWIHSHFRVRGANDMEKPFHSALASTLESQ 279
>gb|EMJ18890.1| hypothetical protein PRUPE_ppa001034mg [Prunus persica]
Length = 927
Score = 154 bits (389), Expect = 2e-35
Identities = 107/257 (41%), Positives = 138/257 (53%), Gaps = 31/257 (12%)
Frame = +1
Query: 4 SATKMRRGKENAMDTGKESLAEMSIDAVDKLXXXXXXXXXXXXXXXXKQRVD-------- 159
S + +R KE++ T LA++S++AV KL +Q
Sbjct: 3 SKNETKRSKESSSGT----LADVSLEAVGKLLRRCNKTGRKKFENSLRQCDSIGKSESGA 58
Query: 160 -------DTRVTWNDLDNSIDGGSLKDSLRN----------------SEGEAETDDIDWE 270
D+RV N L+ + GGS KD+ + ++ + E DD DWE
Sbjct: 59 KRDEEDVDSRVRGNSLETA--GGS-KDAKKKVSWEEKVDRESFQCSFTDTKEELDDADWE 115
Query: 271 DGSTPIKDSLNNDNHVGDDVSRTVTIEFSESPDSAKRKPIRRATAEEKELAELVHKVHLL 450
DG PI +S VGD VTIE +E+PDS +RK IRRA+AE+KELAELVHKVHLL
Sbjct: 116 DGPVPILNS------VGD---HEVTIELNETPDSTRRKRIRRASAEDKELAELVHKVHLL 166
Query: 451 CLLARGRIVDSACDDPLIQXXXXXXXXXXXXKIPEVSKLSANSLSPVVSWFHNNFRIRSS 630
CLLARGR++D ACDD LIQ I +V+K + L P+V WF NNFR+R S
Sbjct: 167 CLLARGRLIDRACDDALIQATLLSLLPVHLLHISKVAKPTVKDLRPLVFWFQNNFRVR-S 225
Query: 631 TSEKRSFQSALAFALET 681
TS +SF SAL FALET
Sbjct: 226 TSVSKSFYSALTFALET 242
>ref|XP_004289443.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Fragaria vesca subsp. vesca]
Length = 919
Score = 146 bits (368), Expect = 6e-33
Identities = 98/251 (39%), Positives = 133/251 (52%), Gaps = 28/251 (11%)
Frame = +1
Query: 16 MRRGKENAMDTGKESLAEMSIDAVDKLXXXXXXXXXXXXXXXX--------------KQR 153
MR KE+A +G SL E+S +AV KL + +
Sbjct: 1 MRSKKESASASG--SLGELSEEAVAKLVRRANRGGKKKFESQLHPSDLIGKHEPGPQRDK 58
Query: 154 VD-DTRVTWNDLDNSI-DGGSLKDSLRNSEGEAET------------DDIDWEDGSTPIK 291
D D RV N L+ + +L+ R++ G+ E+ +D DWEDG PI
Sbjct: 59 KDVDARVASNALETEVCSRDALRKVSRDTNGDEESFQCSFMDSREELNDSDWEDGPVPIS 118
Query: 292 DSLNNDNHVGDDVSRTVTIEFSESPDSAKRKPIRRATAEEKELAELVHKVHLLCLLARGR 471
+S+ VTIE +E+PDS +RK RRA+ E+KE+AELVHK HLLCL+ARGR
Sbjct: 119 NSMGGHE---------VTIEINETPDSRRRKRSRRASVEDKEVAELVHKAHLLCLIARGR 169
Query: 472 IVDSACDDPLIQXXXXXXXXXXXXKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSF 651
++D ACDD LIQ ++ +V+KL+ L P+V WF NNFR+R +TS +RSF
Sbjct: 170 LIDRACDDALIQASLLSLLPEHLLRVSKVAKLTVKHLLPLVFWFQNNFRVR-TTSVRRSF 228
Query: 652 QSALAFALETR 684
AL FALETR
Sbjct: 229 HLALNFALETR 239
>ref|XP_003572211.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Brachypodium distachyon]
Length = 889
Score = 142 bits (359), Expect = 7e-32
Identities = 78/187 (41%), Positives = 112/187 (59%), Gaps = 8/187 (4%)
Frame = +1
Query: 145 KQRVDDTRVTWND---LDNSIDGGSLKDSLRNSEGEAETDD----IDWEDGSTPIKDSLN 303
K + WND + G S K L E EA D +DWE+G + +
Sbjct: 66 KHKKGKVNTKWNDESGMKRCSAGSSEKKFLEKKEPEAIGDSDAAGMDWEEGHVSVVEREQ 125
Query: 304 NDNHVGDDVSRTVTIEFSESPDSAKRKPIRRATAEEKELAELVHKVHLLCLLARGRIVDS 483
+H D+ TVT+EF++ P S +++ +RR TAEEKELAEL+HKVHLLCLLARGR++D
Sbjct: 126 GYSH---DLGETVTVEFTDVPSSTEKRTVRRHTAEEKELAELMHKVHLLCLLARGRVIDK 182
Query: 484 ACDDPLIQ-XXXXXXXXXXXXKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSA 660
AC+DPLIQ +++KL AN+L +VSWFH+ F + + ++E+RSF+S
Sbjct: 183 ACNDPLIQASILSVLPNHLLLNGVDIAKLDANNLRSLVSWFHHTFSVIAQSTERRSFESN 242
Query: 661 LAFALET 681
+AFAL++
Sbjct: 243 MAFALQS 249
>ref|NP_197166.2| DNA repair protein Rad4 [Arabidopsis thaliana]
gi|79327993|ref|NP_001031894.1| DNA repair protein Rad4
[Arabidopsis thaliana] gi|17065358|gb|AAL32833.1|
Unknown protein [Arabidopsis thaliana]
gi|34098839|gb|AAQ56802.1| At5g16630 [Arabidopsis
thaliana] gi|332004936|gb|AED92319.1| DNA repair protein
Rad4 [Arabidopsis thaliana] gi|332004937|gb|AED92320.1|
DNA repair protein Rad4 [Arabidopsis thaliana]
Length = 865
Score = 140 bits (353), Expect = 3e-31
Identities = 77/168 (45%), Positives = 106/168 (63%), Gaps = 1/168 (0%)
Frame = +1
Query: 184 LDNSIDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTVTIEFSES 363
LD + L+D + + E +D DWED P DS +DN+V D +R +TIEF +
Sbjct: 59 LDARLIDNVLEDRGCGNVDDDEMNDSDWEDCPIPSLDSTVDDNNVDD--TRELTIEFDDD 116
Query: 364 -PDSAKRKPIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXXXXXXXXX 540
PD+ K+K RATAE+K AELVHKVHLLCLLARGRIVDSAC+DPLIQ
Sbjct: 117 VPDAKKQKNAYRATAEDKVRAELVHKVHLLCLLARGRIVDSACNDPLIQAALLSLLPSYL 176
Query: 541 XKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALETR 684
K+ + K++ ++P++ W NF + S S ++SF+++LAFALE+R
Sbjct: 177 TKVSNLEKVTVKDIAPLLRWVRENFSVSCSPSSEKSFRTSLAFALESR 224
>ref|XP_003616296.1| DNA repair protein complementing XP-C cells-like protein [Medicago
truncatula] gi|355517631|gb|AES99254.1| DNA repair
protein complementing XP-C cells-like protein [Medicago
truncatula]
Length = 1052
Score = 139 bits (351), Expect = 6e-31
Identities = 76/164 (46%), Positives = 102/164 (62%)
Frame = +1
Query: 193 SIDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTVTIEFSESPDS 372
SID G + + + E DD DWEDG+ + D +TIE + +PDS
Sbjct: 99 SIDEGCI-------DKKEELDDSDWEDGTVAMDD-------------HPMTIELNVTPDS 138
Query: 373 AKRKPIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXXXXXXXXXXKIP 552
+ +K IRRA+AE+KELAELVHKVHLLCLLARGR++D ACDDPLIQ ++
Sbjct: 139 SVKKQIRRASAEDKELAELVHKVHLLCLLARGRLIDRACDDPLIQASLLSLLPAHLLQLS 198
Query: 553 EVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALETR 684
V+KL++ SL P++SWFH NF ++ T+ ++S ALA ALE R
Sbjct: 199 NVTKLTSKSLCPLISWFHENFHAKNCTNGEKSPHFALASALELR 242
>gb|ERM94149.1| hypothetical protein AMTR_s00010p00163020 [Amborella trichopoda]
Length = 918
Score = 138 bits (348), Expect = 1e-30
Identities = 75/152 (49%), Positives = 100/152 (65%)
Frame = +1
Query: 229 NSEGEAETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTVTIEFSESPDSAKRKPIRRATAE 408
NS+ E + +DWEDG+ I S + + + + V +EFS +P SAKR+ +RR +A
Sbjct: 50 NSKCEVH-EGLDWEDGN--ISFSNTEVPCIPETLEQEVIVEFSGTPSSAKRQNVRRISAI 106
Query: 409 EKELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXXXXXXXXXXKIPEVSKLSANSLSP 588
+KEL ELVHKVHLLCLLARGR+VD+ACDDPLIQ KI EV KL+A+ L P
Sbjct: 107 DKELVELVHKVHLLCLLARGRLVDAACDDPLIQASLLSLLPPHLLKISEVQKLTADLLVP 166
Query: 589 VVSWFHNNFRIRSSTSEKRSFQSALAFALETR 684
+V WF NF +R+ + EK F+ +LA A+ETR
Sbjct: 167 LVEWFRANFHVRNESIEKMPFKESLAAAIETR 198
>ref|XP_004155756.1| PREDICTED: DNA repair protein complementing XP-C cells-like
[Cucumis sativus]
Length = 923
Score = 137 bits (346), Expect = 2e-30
Identities = 77/159 (48%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Frame = +1
Query: 220 SLRNSEGEA--ETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTVTIEFSES---PDSAKRK 384
+L+NS E + DD DWEDG D S+ +TIE SE PDS KRK
Sbjct: 102 NLQNSVSEVLEDLDDSDWEDGCVRPLDGTE---------SQPLTIEISEIQEIPDSTKRK 152
Query: 385 PIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXXXXXXXXXXKIPEVSK 564
PIRRA+A +KE+AE VHKVHLLCLL RGR++D AC+DPLIQ KI +
Sbjct: 153 PIRRASAADKEIAEFVHKVHLLCLLGRGRLIDRACNDPLIQAALLSLLPAHLLKISPAKQ 212
Query: 565 LSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALET 681
L+A SL P+V+W H+NF +R+ + S SALA ALET
Sbjct: 213 LTATSLKPLVAWLHDNFHVRNQARSEGSINSALAHALET 251
>ref|XP_004140360.1| PREDICTED: DNA repair protein complementing XP-C cells-like
[Cucumis sativus]
Length = 923
Score = 137 bits (346), Expect = 2e-30
Identities = 77/159 (48%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Frame = +1
Query: 220 SLRNSEGEA--ETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTVTIEFSES---PDSAKRK 384
+L+NS E + DD DWEDG D S+ +TIE SE PDS KRK
Sbjct: 102 NLQNSVSEVLEDLDDSDWEDGCVRPLDGTE---------SQPLTIEISEIQEIPDSTKRK 152
Query: 385 PIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXXXXXXXXXXKIPEVSK 564
PIRRA+A +KE+AE VHKVHLLCLL RGR++D AC+DPLIQ KI +
Sbjct: 153 PIRRASAADKEIAEFVHKVHLLCLLGRGRLIDRACNDPLIQAALLSLLPAHLLKISPAKQ 212
Query: 565 LSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALET 681
L+A SL P+V+W H+NF +R+ + S SALA ALET
Sbjct: 213 LTATSLKPLVAWLHDNFHVRNQARSEGSINSALAHALET 251
>ref|XP_006287057.1| hypothetical protein CARUB_v10000205mg [Capsella rubella]
gi|482555763|gb|EOA19955.1| hypothetical protein
CARUB_v10000205mg [Capsella rubella]
Length = 855
Score = 137 bits (345), Expect = 3e-30
Identities = 70/151 (46%), Positives = 100/151 (66%)
Frame = +1
Query: 232 SEGEAETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTVTIEFSESPDSAKRKPIRRATAEE 411
S+ + E +D DWED P SL++ D +R +TIEF + PD+ K+K RATA++
Sbjct: 76 SDDDDEMNDSDWEDCPIP---SLDDRVDANVDDTRDLTIEFDDVPDAKKQKNAYRATAKD 132
Query: 412 KELAELVHKVHLLCLLARGRIVDSACDDPLIQXXXXXXXXXXXXKIPEVSKLSANSLSPV 591
KE AELVHKVHLLCLLARGRIVD+AC+DPLIQ K+ + K++ ++P+
Sbjct: 133 KERAELVHKVHLLCLLARGRIVDNACNDPLIQAALLSLLPSYLSKVANLEKVTVKDIAPL 192
Query: 592 VSWFHNNFRIRSSTSEKRSFQSALAFALETR 684
+ W NF +R + S ++SF+++LAFALE+R
Sbjct: 193 LRWVRENFSVRCTPSSEKSFRTSLAFALESR 223