BLASTX nr result

ID: Jatropha_contig00026466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00026466
         (573 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329289.1| predicted protein [Populus trichocarpa] gi|5...    77   2e-12
ref|XP_002305168.1| predicted protein [Populus trichocarpa] gi|2...    76   6e-12
ref|XP_002280530.1| PREDICTED: uncharacterized protein LOC100256...    57   2e-06
emb|CAN62793.1| hypothetical protein VITISV_024907 [Vitis vinifera]    57   2e-06
gb|ESR43993.1| hypothetical protein CICLE_v10012557mg [Citrus cl...    57   3e-06
ref|XP_003553243.1| PREDICTED: uncharacterized protein LOC100818...    56   5e-06
gb|ADN33684.1| hypothetical protein [Cucumis melo subsp. melo]         55   9e-06

>ref|XP_002329289.1| predicted protein [Populus trichocarpa] gi|550339052|gb|ERP61238.1|
           hypothetical protein POPTR_0005s15540g [Populus
           trichocarpa]
          Length = 245

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 50/106 (47%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
 Frame = +2

Query: 122 LNCVSGYGXXXXXXXXXXXXXXTGSTAPTGVKRVPLSKDNSSNHKHNKQALFLKPQSSST 301
           LNC SGYG               GST  +  KR PL+KD  +NHK NKQA F   QSSST
Sbjct: 140 LNCASGYGKSLCHLPLLSRSYSAGSTPRS--KRAPLTKD--TNHKQNKQAFFKSSQSSST 195

Query: 302 -SHQKPPLKKNYGSYGNGSVRXXXXXXXXXXXXXXXXXXFGLGSIF 436
            ++QKPPLKKNYG YGNG                     FGLGSIF
Sbjct: 196 KNYQKPPLKKNYGPYGNG-------VRVSPVLNVPSGNLFGLGSIF 234


>ref|XP_002305168.1| predicted protein [Populus trichocarpa] gi|222848132|gb|EEE85679.1|
           hypothetical protein POPTR_0004s09790g [Populus
           trichocarpa]
          Length = 224

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 50/107 (46%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
 Frame = +2

Query: 122 LNCVSGYGXXXXXXXXXXXXXXTGSTAPTGVKRVPLSKDNSSNHKHNKQALFLKPQ--SS 295
           LNC SGYG              TGST  +  KR PL+KD  +NHK ++Q+ FLKP   SS
Sbjct: 120 LNCASGYGKSLCPLPLLSRSYSTGSTPSS--KRAPLTKD--TNHKQHRQS-FLKPSQSSS 174

Query: 296 STSHQKPPLKKNYGSYGNGSVRXXXXXXXXXXXXXXXXXXFGLGSIF 436
           ST++QKPPLKKNYG YGNG                     FGLGSIF
Sbjct: 175 STNYQKPPLKKNYGPYGNG-------VRVSPVLNVSSGNLFGLGSIF 214


>ref|XP_002280530.1| PREDICTED: uncharacterized protein LOC100256597 [Vitis vinifera]
          Length = 250

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 43/110 (39%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
 Frame = +2

Query: 122 LNCVSGYGXXXXXXXXXXXXXXTGSTAPTGVKRVPLSKDNSSN----HKHNKQALFLKPQ 289
           LNC SGY               TGS +    KR  LS  + +N    HKH   A    P 
Sbjct: 139 LNCSSGYARSLCPLPLLSRSNSTGSVS--NAKRSALSSKDGNNIKNWHKHPSVAPIKSPH 196

Query: 290 SSS-TSHQKPPLKKNYGSYGNGSVRXXXXXXXXXXXXXXXXXXFGLGSIF 436
           SSS TS+QKPPLKK YGS+ NG                     FGLGSIF
Sbjct: 197 SSSSTSYQKPPLKKTYGSHSNG-------VRINPVLNVPTPSLFGLGSIF 239


>emb|CAN62793.1| hypothetical protein VITISV_024907 [Vitis vinifera]
          Length = 250

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 43/110 (39%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
 Frame = +2

Query: 122 LNCVSGYGXXXXXXXXXXXXXXTGSTAPTGVKRVPLSKDNSSN----HKHNKQALFLKPQ 289
           LNC SGY               TGS +    KR  LS  + +N    HKH   A    P 
Sbjct: 139 LNCSSGYARSLCPLPLLSRSNSTGSVS--NAKRSALSSKDGNNIKNWHKHPSVAPIKSPH 196

Query: 290 SSS-TSHQKPPLKKNYGSYGNGSVRXXXXXXXXXXXXXXXXXXFGLGSIF 436
           SSS TS+QKPPLKK YGS+ NG                     FGLGSIF
Sbjct: 197 SSSSTSYQKPPLKKTYGSHSNG-------VRINPVLNVPTPSLFGLGSIF 239


>gb|ESR43993.1| hypothetical protein CICLE_v10012557mg [Citrus clementina]
          Length = 250

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 43/110 (39%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
 Frame = +2

Query: 122 LNCVSGYGXXXXXXXXXXXXXXTGSTAPTGVKRVPLSKDNSSNHKHNKQALFLKPQSSS- 298
           LNC SGYG              +  +A    KR  LSKD S+            P SSS 
Sbjct: 154 LNCGSGYGRSLCPLPPLLSRSNSTGSASND-KRAALSKDGSNK----------SPSSSSI 202

Query: 299 -TSHQKPPLKKNYGSYGNGSVRXXXXXXXXXXXXXXXXXXFGLGSIFGKE 445
            +S+ KPPLKKNYGSYGNG                     FGLGSIFGK+
Sbjct: 203 KSSYLKPPLKKNYGSYGNG-------VHVNPVLNVPSGNLFGLGSIFGKD 245


>ref|XP_003553243.1| PREDICTED: uncharacterized protein LOC100818205 [Glycine max]
          Length = 265

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 39/107 (36%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
 Frame = +2

Query: 125 NCVSGYGXXXXXXXXXXXXXXTGSTAPTGVKRVPLSKDNSSNHKHNKQALFLKPQS---S 295
           +C SGYG              TGS+    VKR+PLSK+   N +    +     QS   +
Sbjct: 158 SCGSGYGSSLCPLPLLSRSNSTGSSP--SVKRIPLSKEVKQNSQKRSSSSTRFSQSHHLA 215

Query: 296 STSHQKPPLKKNYGSYGNGSVRXXXXXXXXXXXXXXXXXXFGLGSIF 436
           S +HQKPPLK+++GSY N  VR                  FGLGSIF
Sbjct: 216 SHNHQKPPLKRSHGSYANNGVR------VSPVLNVPSANLFGLGSIF 256


>gb|ADN33684.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 262

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 40/106 (37%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
 Frame = +2

Query: 125 NCVSGYGXXXXXXXXXXXXXXTGSTAPTGVKRVPLSKDNSSNHKHNKQALFLKPQ--SSS 298
           +C SGY               TGS++   +KR PLSKD  +  + ++  L    Q  SSS
Sbjct: 155 SCGSGYTRSLCPLPLLSRSNSTGSSS-NNIKRTPLSKDGVNQKQSSRNGLKNLQQCSSSS 213

Query: 299 TSHQKPPLKKNYGSYGNGSVRXXXXXXXXXXXXXXXXXXFGLGSIF 436
           T  QKPPLKK +GSYGNG                     FGLGSIF
Sbjct: 214 TGFQKPPLKKVHGSYGNG-------VKVNPILNVHSANLFGLGSIF 252


Top