BLASTX nr result
ID: Jatropha_contig00026444
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00026444
(359 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004247215.1| PREDICTED: photosystem II reaction center W ... 98 9e-19
ref|XP_006349749.1| PREDICTED: photosystem II reaction center W ... 94 2e-17
ref|XP_002531284.1| Photosystem II reaction center W protein, ch... 93 3e-17
ref|XP_002520988.1| Photosystem II reaction center W protein, ch... 88 1e-15
gb|ESQ51613.1| hypothetical protein EUTSA_v10017409mg [Eutrema s... 86 6e-15
ref|XP_004165637.1| PREDICTED: photosystem II reaction center W ... 85 8e-15
ref|XP_004146953.1| PREDICTED: photosystem II reaction center W ... 85 8e-15
ref|XP_006352753.1| PREDICTED: photosystem II reaction center W ... 85 1e-14
ref|XP_004242350.1| PREDICTED: photosystem II reaction center W ... 85 1e-14
ref|XP_006295756.1| hypothetical protein CARUB_v10024876mg [Caps... 84 2e-14
ref|NP_001236601.1| uncharacterized protein LOC100526966 [Glycin... 84 2e-14
gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem I... 82 5e-14
ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arab... 82 7e-14
ref|NP_180615.1| photosystem II reaction center W protein [Arabi... 82 7e-14
gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus pe... 82 9e-14
ref|XP_004970145.1| PREDICTED: photosystem II reaction center W ... 81 1e-13
ref|XP_004961567.1| PREDICTED: photosystem II reaction center W ... 81 1e-13
dbj|BAJ92812.1| predicted protein [Hordeum vulgare subsp. vulgar... 81 1e-13
ref|XP_002440047.1| hypothetical protein SORBIDRAFT_09g025010 [S... 81 1e-13
ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [S... 81 1e-13
>ref|XP_004247215.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum lycopersicum]
Length = 132
Score = 98.2 bits (243), Expect = 9e-19
Identities = 51/81 (62%), Positives = 54/81 (66%)
Frame = +2
Query: 5 GCKVRXSMEEKGEGKSKXXXXXXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSNN 184
G KV+ SME KG+G+SK LVDERMSTEGTGLPFGLSNN
Sbjct: 39 GGKVKCSMEGKGKGESKLGMGESLMAAAVAASMSSPVAMALVDERMSTEGTGLPFGLSNN 98
Query: 185 LLGWILLGVFGLIWSFYTVYT 247
LLGWILLGVFGLIWS YTVYT
Sbjct: 99 LLGWILLGVFGLIWSLYTVYT 119
>ref|XP_006349749.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum tuberosum]
Length = 132
Score = 93.6 bits (231), Expect = 2e-17
Identities = 49/81 (60%), Positives = 52/81 (64%)
Frame = +2
Query: 5 GCKVRXSMEEKGEGKSKXXXXXXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSNN 184
G KV+ SME K +G+SK LVDERMSTEGTGLPFGLSNN
Sbjct: 39 GGKVKCSMEGKPKGESKLGMGESLMAAAVAASMSNPVAMALVDERMSTEGTGLPFGLSNN 98
Query: 185 LLGWILLGVFGLIWSFYTVYT 247
LLGWIL GVFGLIWS YTVYT
Sbjct: 99 LLGWILFGVFGLIWSLYTVYT 119
>ref|XP_002531284.1| Photosystem II reaction center W protein, chloroplast precursor,
putative [Ricinus communis] gi|223529117|gb|EEF31097.1|
Photosystem II reaction center W protein, chloroplast
precursor, putative [Ricinus communis]
Length = 134
Score = 93.2 bits (230), Expect = 3e-17
Identities = 50/84 (59%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = +2
Query: 5 GCKVRXSMEEKGEGKSKXXXXXXXXXXXXXXXXXXXXXXX---LVDERMSTEGTGLPFGL 175
GC+VR S+EEK E K K LVDERMSTEGTGLPFGL
Sbjct: 38 GCRVRCSIEEKAEAKDKSLNTSMVASMVAAASAVAATAGPAMALVDERMSTEGTGLPFGL 97
Query: 176 SNNLLGWILLGVFGLIWSFYTVYT 247
SNNLLGWILLGVF LIWS YTVYT
Sbjct: 98 SNNLLGWILLGVFALIWSLYTVYT 121
>ref|XP_002520988.1| Photosystem II reaction center W protein, chloroplast precursor,
putative [Ricinus communis] gi|223539825|gb|EEF41405.1|
Photosystem II reaction center W protein, chloroplast
precursor, putative [Ricinus communis]
Length = 132
Score = 87.8 bits (216), Expect = 1e-15
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVDER+STEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT
Sbjct: 79 LVDERLSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 119
>gb|ESQ51613.1| hypothetical protein EUTSA_v10017409mg [Eutrema salsugineum]
Length = 133
Score = 85.5 bits (210), Expect = 6e-15
Identities = 45/78 (57%), Positives = 48/78 (61%)
Frame = +2
Query: 14 VRXSMEEKGEGKSKXXXXXXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSNNLLG 193
VR SME+K E S LVD+RMSTEGTGLPFGLSNNLLG
Sbjct: 43 VRCSMEKKQENVSVVGAGVSAAATAALTAVMSNPAMALVDDRMSTEGTGLPFGLSNNLLG 102
Query: 194 WILLGVFGLIWSFYTVYT 247
WIL GVFGLIW+FY VYT
Sbjct: 103 WILFGVFGLIWTFYFVYT 120
>ref|XP_004165637.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like isoform 1 [Cucumis sativus]
Length = 145
Score = 85.1 bits (209), Expect = 8e-15
Identities = 47/82 (57%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Frame = +2
Query: 14 VRXSMEEKGEG----KSKXXXXXXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSN 181
VR SME KG G KS LVDER+STEGTGLPFGLSN
Sbjct: 51 VRCSMEGKGNGEVENKSSNLGMGASLIAAACAATMSSPAMALVDERLSTEGTGLPFGLSN 110
Query: 182 NLLGWILLGVFGLIWSFYTVYT 247
NLLGWILLGVF LIW+FY VYT
Sbjct: 111 NLLGWILLGVFALIWAFYIVYT 132
>ref|XP_004146953.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Cucumis sativus]
gi|449517209|ref|XP_004165638.1| PREDICTED: photosystem
II reaction center W protein, chloroplastic-like isoform
2 [Cucumis sativus]
Length = 137
Score = 85.1 bits (209), Expect = 8e-15
Identities = 47/82 (57%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Frame = +2
Query: 14 VRXSMEEKGEG----KSKXXXXXXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSN 181
VR SME KG G KS LVDER+STEGTGLPFGLSN
Sbjct: 43 VRCSMEGKGNGEVENKSSNLGMGASLIAAACAATMSSPAMALVDERLSTEGTGLPFGLSN 102
Query: 182 NLLGWILLGVFGLIWSFYTVYT 247
NLLGWILLGVF LIW+FY VYT
Sbjct: 103 NLLGWILLGVFALIWAFYIVYT 124
>ref|XP_006352753.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum tuberosum]
Length = 132
Score = 84.7 bits (208), Expect = 1e-14
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVDERMSTEGTGLPFGLSNNLLGWIL GVFGL+WS YTVYT
Sbjct: 79 LVDERMSTEGTGLPFGLSNNLLGWILFGVFGLVWSLYTVYT 119
>ref|XP_004242350.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum lycopersicum]
Length = 128
Score = 84.7 bits (208), Expect = 1e-14
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVDERMSTEGTGLPFGLSNNLLGWIL GVFGL+WS YTVYT
Sbjct: 75 LVDERMSTEGTGLPFGLSNNLLGWILFGVFGLVWSLYTVYT 115
>ref|XP_006295756.1| hypothetical protein CARUB_v10024876mg [Capsella rubella]
gi|482564464|gb|EOA28654.1| hypothetical protein
CARUB_v10024876mg [Capsella rubella]
Length = 133
Score = 83.6 bits (205), Expect = 2e-14
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVDERMSTEGTGLPFGLSNNLLGWIL GVFGLIW+FY VYT
Sbjct: 80 LVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFVYT 120
>ref|NP_001236601.1| uncharacterized protein LOC100526966 [Glycine max]
gi|255631268|gb|ACU16001.1| unknown [Glycine max]
Length = 133
Score = 83.6 bits (205), Expect = 2e-14
Identities = 43/79 (54%), Positives = 47/79 (59%)
Frame = +2
Query: 11 KVRXSMEEKGEGKSKXXXXXXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSNNLL 190
+VR SMEEK S LVDER+STEGTGLPFGLSNNLL
Sbjct: 42 RVRCSMEEKPSSSSNLGMGASLLAAAAAATMSSPAAMALVDERLSTEGTGLPFGLSNNLL 101
Query: 191 GWILLGVFGLIWSFYTVYT 247
GWIL GVFGLIW+ + VYT
Sbjct: 102 GWILFGVFGLIWALFFVYT 120
>gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem II reaction center
[Brassica rapa]
Length = 133
Score = 82.4 bits (202), Expect = 5e-14
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVD+RMSTEGTGLPFGLSNNLLGWILLGVFGLIW+FY YT
Sbjct: 80 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYT 120
>ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arabidopsis lyrata subsp.
lyrata] gi|297326958|gb|EFH57378.1| hypothetical protein
ARALYDRAFT_902045 [Arabidopsis lyrata subsp. lyrata]
Length = 133
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVDERMSTEGTGLPFGLSNNLLGWIL GVFGLIW+F+ VYT
Sbjct: 80 LVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYT 120
>ref|NP_180615.1| photosystem II reaction center W protein [Arabidopsis thaliana]
gi|122064936|sp|Q39194.2|PSBW_ARATH RecName:
Full=Photosystem II reaction center W protein,
chloroplastic; AltName: Full=PSII 6.1 kDa protein;
Flags: Precursor gi|11762232|gb|AAG40394.1|AF325042_1
At2g30570 [Arabidopsis thaliana]
gi|14030715|gb|AAK53032.1|AF375448_1 At2g30570/T6B20.8
[Arabidopsis thaliana] gi|1946362|gb|AAB63080.1|
photosystem II reaction center 6.1KD protein
[Arabidopsis thaliana] gi|21593002|gb|AAM64951.1|
photosystem II reaction center 6.1KD protein
[Arabidopsis thaliana] gi|23506075|gb|AAN28897.1|
At2g30570/T6B20.8 [Arabidopsis thaliana]
gi|330253315|gb|AEC08409.1| photosystem II reaction
center W protein [Arabidopsis thaliana]
Length = 133
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVDERMSTEGTGLPFGLSNNLLGWIL GVFGLIW+F+ VYT
Sbjct: 80 LVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYT 120
>gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus persica]
Length = 165
Score = 81.6 bits (200), Expect = 9e-14
Identities = 41/79 (51%), Positives = 47/79 (59%)
Frame = +2
Query: 11 KVRXSMEEKGEGKSKXXXXXXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSNNLL 190
KV SME K E + LVD+R+STEGTGLPFGLSNN+L
Sbjct: 74 KVGCSMEGKKESSNSKMGKGASLAAAAMAATMSSPAMALVDDRLSTEGTGLPFGLSNNIL 133
Query: 191 GWILLGVFGLIWSFYTVYT 247
GWIL GVFGLIW+FY +YT
Sbjct: 134 GWILFGVFGLIWTFYFIYT 152
>ref|XP_004970145.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Setaria italica]
Length = 130
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/41 (92%), Positives = 38/41 (92%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVDERMSTEGTGL GLSNNLLGWILLGVFGLIWS YTVYT
Sbjct: 76 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYT 116
>ref|XP_004961567.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Setaria italica]
Length = 204
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/41 (92%), Positives = 38/41 (92%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVDERMSTEGTGL GLSNNLLGWILLGVFGLIWS YTVYT
Sbjct: 150 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYT 190
>dbj|BAJ92812.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521836|dbj|BAK00494.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 128
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/41 (92%), Positives = 38/41 (92%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVDERMSTEGTGL GLSNNLLGWILLGVFGLIWS YTVYT
Sbjct: 74 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYT 114
>ref|XP_002440047.1| hypothetical protein SORBIDRAFT_09g025010 [Sorghum bicolor]
gi|241945332|gb|EES18477.1| hypothetical protein
SORBIDRAFT_09g025010 [Sorghum bicolor]
Length = 63
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/41 (92%), Positives = 38/41 (92%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVDERMSTEGTGL GLSNNLLGWILLGVFGLIWS YTVYT
Sbjct: 10 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYT 50
>ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [Sorghum bicolor]
gi|241930553|gb|EES03698.1| hypothetical protein
SORBIDRAFT_03g036090 [Sorghum bicolor]
Length = 126
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/41 (92%), Positives = 38/41 (92%)
Frame = +2
Query: 125 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYT 247
LVDERMSTEGTGL GLSNNLLGWILLGVFGLIWS YTVYT
Sbjct: 73 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYT 113