BLASTX nr result
ID: Jatropha_contig00026329
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00026329
(764 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002525397.1| Signal recognition particle receptor subunit... 290 3e-88
gb|EOY25233.1| Signal recognition particle receptor subunit beta... 276 3e-84
ref|XP_002300699.1| predicted protein [Populus trichocarpa] 278 3e-84
gb|ERP63968.1| hypothetical protein POPTR_0002s02250g [Populus t... 277 5e-84
gb|EOY25235.1| Signal recognition particle receptor subunit beta... 271 7e-83
gb|ESR51566.1| hypothetical protein CICLE_v10032463mg [Citrus cl... 263 2e-80
gb|EMJ10655.1| hypothetical protein PRUPE_ppa009762mg [Prunus pe... 266 7e-80
gb|ESQ40477.1| hypothetical protein EUTSA_v10014432mg [Eutrema s... 258 4e-78
ref|XP_004309831.1| PREDICTED: signal recognition particle recep... 258 7e-77
ref|XP_002265544.2| PREDICTED: signal recognition particle recep... 256 7e-77
ref|XP_002873217.1| signal recognition particle binding protein ... 250 7e-76
ref|NP_196186.1| signal recognition particle receptor subunit be... 245 2e-74
dbj|BAF00102.1| signal recognition particle receptor beta subuni... 243 9e-74
gb|EMJ13060.1| hypothetical protein PRUPE_ppa010051mg [Prunus pe... 244 2e-73
ref|XP_006288480.1| hypothetical protein CARUB_v10001748mg [Caps... 244 2e-73
ref|XP_002886264.1| signal recognition particle binding protein ... 236 4e-71
ref|XP_006299761.1| hypothetical protein CARUB_v10015957mg [Caps... 238 1e-70
ref|NP_179467.1| SR-beta domain-containing protein [Arabidopsis ... 233 2e-70
dbj|BAE99974.1| putative signal recognition particle receptor be... 233 2e-70
gb|AAU44447.1| hypothetical protein AT2G18770 [Arabidopsis thali... 231 7e-70
>ref|XP_002525397.1| Signal recognition particle receptor subunit beta, putative
[Ricinus communis] gi|223535360|gb|EEF37035.1| Signal
recognition particle receptor subunit beta, putative
[Ricinus communis]
Length = 259
Score = 290 bits (741), Expect(2) = 3e-88
Identities = 147/185 (79%), Positives = 160/185 (86%)
Frame = +1
Query: 121 MEGMEQWKNEAKQWLQHGIEYANQIEWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMI 300
MEG+EQWKNEAKQWLQ QGIE+AN+IPP QLY AAAVLL+T FLL+I
Sbjct: 1 MEGVEQWKNEAKQWLQ-------------QGIEFANQIPPAQLYAAAAVLLITTLFLLII 47
Query: 301 RLFKRTKSNTIVLTGLSGAGKTVLFYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKI 480
R F+RTKSNTIVLTGLSG+GKTVLFYQLRDGS+HQGTVTSME NEGTF+L SE+SK GK+
Sbjct: 48 RFFRRTKSNTIVLTGLSGSGKTVLFYQLRDGSSHQGTVTSMEQNEGTFILHSENSKKGKL 107
Query: 481 KPVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKK 660
KPVH VDVPGHSRLR KLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVK+
Sbjct: 108 KPVHFVDVPGHSRLRSKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKR 167
Query: 661 KVRFL 675
K+ L
Sbjct: 168 KIPVL 172
Score = 62.8 bits (151), Expect(2) = 3e-88
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+++ PVLICCNKTDKVTAHT EFIRKQLEKEI +LRA
Sbjct: 166 KRKIPVLICCNKTDKVTAHTKEFIRKQLEKEIDKLRA 202
>gb|EOY25233.1| Signal recognition particle receptor subunit beta isoform 1
[Theobroma cacao] gi|508777978|gb|EOY25234.1| Signal
recognition particle receptor subunit beta isoform 1
[Theobroma cacao]
Length = 273
Score = 276 bits (706), Expect(2) = 3e-84
Identities = 142/186 (76%), Positives = 156/186 (83%), Gaps = 1/186 (0%)
Frame = +1
Query: 121 MEGMEQWKNEAKQWLQHGIEYANQIE-WLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLM 297
MEGMEQWK++ +Q + NQ+E WL Q IE+ N+IPP QLY A AVLLV+ LL
Sbjct: 1 MEGMEQWKDQLEQLKSQLEPWKNQLEQWLHQAIEFLNQIPPIQLYAAVAVLLVSTLLLLS 60
Query: 298 IRLFKRTKSNTIVLTGLSGAGKTVLFYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGK 477
LFKRTKSN+IVLTGLSG+GKTVLFYQLRDGS+HQGTVTSMEPNEGTFVL+SES K GK
Sbjct: 61 FHLFKRTKSNSIVLTGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLNSESYKKGK 120
Query: 478 IKPVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVK 657
KPVHLVDVPGHSRL+PKLDEFLPQAAGIVFVVDALEFLPN R SEYLYDILTKASVVK
Sbjct: 121 TKPVHLVDVPGHSRLQPKLDEFLPQAAGIVFVVDALEFLPNCRLASEYLYDILTKASVVK 180
Query: 658 KKVRFL 675
KK+ L
Sbjct: 181 KKIPVL 186
Score = 63.2 bits (152), Expect(2) = 3e-84
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+K+ PVLICCNKTDKVTAHT EFIRKQ+EKEI +LRA
Sbjct: 180 KKKIPVLICCNKTDKVTAHTKEFIRKQMEKEIDKLRA 216
>ref|XP_002300699.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 278 bits (711), Expect(2) = 3e-84
Identities = 142/185 (76%), Positives = 157/185 (84%)
Frame = +1
Query: 121 MEGMEQWKNEAKQWLQHGIEYANQIEWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMI 300
MEG+EQWK EA+QWLQ QGIEYA+++PPTQLY A AVLL T LL I
Sbjct: 1 MEGIEQWKTEAQQWLQ-------------QGIEYAHQLPPTQLYAAVAVLLFTTLLLLTI 47
Query: 301 RLFKRTKSNTIVLTGLSGAGKTVLFYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKI 480
RL KRTKSNTIVL+GLSG+GKTVLFYQLRDGS+HQGTVTSMEPNEGTF+L SES+K GKI
Sbjct: 48 RLLKRTKSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFLLHSESAKKGKI 107
Query: 481 KPVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKK 660
KPVH+VDVPGHSRLRPKLD+FLPQAAGIVFVVDALEFLPNL V+EYLYDILTKASVVK+
Sbjct: 108 KPVHVVDVPGHSRLRPKLDDFLPQAAGIVFVVDALEFLPNLSAVTEYLYDILTKASVVKR 167
Query: 661 KVRFL 675
K+ L
Sbjct: 168 KLPVL 172
Score = 61.2 bits (147), Expect(2) = 3e-84
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLR 761
+++ PVLICCNKTDKVTAHT EFIRKQLEKEI +LR
Sbjct: 166 KRKLPVLICCNKTDKVTAHTKEFIRKQLEKEIEKLR 201
>gb|ERP63968.1| hypothetical protein POPTR_0002s02250g [Populus trichocarpa]
gi|550344110|gb|ERP63969.1| hypothetical protein
POPTR_0002s02250g [Populus trichocarpa]
gi|550344111|gb|EEE79972.2| hypothetical protein
POPTR_0002s02250g [Populus trichocarpa]
Length = 258
Score = 277 bits (709), Expect(2) = 5e-84
Identities = 141/185 (76%), Positives = 157/185 (84%)
Frame = +1
Query: 121 MEGMEQWKNEAKQWLQHGIEYANQIEWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMI 300
MEG+EQWK EA+QWLQ QGIEYA+++PPTQLY A AVLL T LL I
Sbjct: 1 MEGIEQWKTEAQQWLQ-------------QGIEYAHQLPPTQLYAAVAVLLFTTLLLLTI 47
Query: 301 RLFKRTKSNTIVLTGLSGAGKTVLFYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKI 480
R+ KRTKSNTIVL+GLSG+GKTVLFYQLRDGS+HQGTVTSMEPNEGTF+L SES+K GKI
Sbjct: 48 RMLKRTKSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFLLHSESAKKGKI 107
Query: 481 KPVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKK 660
KPVH+VDVPGHSRLRPKLD+FLPQAAGIVFVVDALEFLPNL V+EYLYDILTKASVVK+
Sbjct: 108 KPVHVVDVPGHSRLRPKLDDFLPQAAGIVFVVDALEFLPNLSAVTEYLYDILTKASVVKR 167
Query: 661 KVRFL 675
K+ L
Sbjct: 168 KLPVL 172
Score = 61.2 bits (147), Expect(2) = 5e-84
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLR 761
+++ PVLICCNKTDKVTAHT EFIRKQLEKEI +LR
Sbjct: 166 KRKLPVLICCNKTDKVTAHTKEFIRKQLEKEIEKLR 201
>gb|EOY25235.1| Signal recognition particle receptor subunit beta isoform 3
[Theobroma cacao]
Length = 272
Score = 271 bits (694), Expect(2) = 7e-83
Identities = 142/186 (76%), Positives = 156/186 (83%), Gaps = 1/186 (0%)
Frame = +1
Query: 121 MEGMEQWKNEAKQWLQHGIEYANQIE-WLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLM 297
MEGMEQWK++ +Q + NQ+E WL Q IE+ N+IPP QLY A AVLLV+ LL
Sbjct: 1 MEGMEQWKDQLEQLKSQLEPWKNQLEQWLHQAIEFLNQIPPIQLYAAVAVLLVSTLLLLS 60
Query: 298 IRLFKRTKSNTIVLTGLSGAGKTVLFYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGK 477
LFKRTKSN+IVLTGLSG+GKTVLFYQLRDGS+HQGTVTSMEPNEGTFVL+SES K GK
Sbjct: 61 FHLFKRTKSNSIVLTGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLNSESYK-GK 119
Query: 478 IKPVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVK 657
KPVHLVDVPGHSRL+PKLDEFLPQAAGIVFVVDALEFLPN R SEYLYDILTKASVVK
Sbjct: 120 TKPVHLVDVPGHSRLQPKLDEFLPQAAGIVFVVDALEFLPNCRLASEYLYDILTKASVVK 179
Query: 658 KKVRFL 675
KK+ L
Sbjct: 180 KKIPVL 185
Score = 63.2 bits (152), Expect(2) = 7e-83
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+K+ PVLICCNKTDKVTAHT EFIRKQ+EKEI +LRA
Sbjct: 179 KKKIPVLICCNKTDKVTAHTKEFIRKQMEKEIDKLRA 215
>gb|ESR51566.1| hypothetical protein CICLE_v10032463mg [Citrus clementina]
Length = 263
Score = 263 bits (673), Expect(2) = 2e-80
Identities = 133/184 (72%), Positives = 150/184 (81%)
Frame = +1
Query: 124 EGMEQWKNEAKQWLQHGIEYANQIEWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMIR 303
EGMEQWK + + EWL +GIE+ N+IPPTQLY+A AVLL+T LL+++
Sbjct: 6 EGMEQWKKDLE-------------EWLNRGIEFINQIPPTQLYIACAVLLLTTALLLLLQ 52
Query: 304 LFKRTKSNTIVLTGLSGAGKTVLFYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKIK 483
+F+R KSNTIVL GLSG+GKTVLFYQLRDGS HQGTVTSMEPNE TFVL SES+K GKIK
Sbjct: 53 VFRRKKSNTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIK 112
Query: 484 PVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKK 663
PVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPN SEYLYDILT ++VVKKK
Sbjct: 113 PVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKK 172
Query: 664 VRFL 675
+ L
Sbjct: 173 IPVL 176
Score = 63.2 bits (152), Expect(2) = 2e-80
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+K+ PVLICCNKTDKVTAHT EFIRKQ+EKEI +LRA
Sbjct: 170 KKKIPVLICCNKTDKVTAHTKEFIRKQMEKEIDKLRA 206
>gb|EMJ10655.1| hypothetical protein PRUPE_ppa009762mg [Prunus persica]
Length = 279
Score = 266 bits (680), Expect(2) = 7e-80
Identities = 125/181 (69%), Positives = 152/181 (83%)
Frame = +1
Query: 133 EQWKNEAKQWLQHGIEYANQIEWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMIRLFK 312
EQWK +A++W +E+ +W Q +EY +++PP Q+Y A A+L+ T F L+++RLFK
Sbjct: 12 EQWKKQAEKWSSQALEHIQAEKWSSQALEYIHQVPPEQIYAAIAILIFTSFLLILVRLFK 71
Query: 313 RTKSNTIVLTGLSGAGKTVLFYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKIKPVH 492
R K+NTI+L+GLSG+GKT+LFYQLRDGS+HQGTVTSMEPNEGTFVL SE SK+GK+ PVH
Sbjct: 72 RPKANTILLSGLSGSGKTLLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEKSKNGKVNPVH 131
Query: 493 LVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKKVRF 672
LVDVPGHSRLR KLD+FLPQAAGIVFVVDALEFLPN R SEYLYDILTKASVV+KK+
Sbjct: 132 LVDVPGHSRLRAKLDDFLPQAAGIVFVVDALEFLPNCRAASEYLYDILTKASVVRKKIPV 191
Query: 673 L 675
L
Sbjct: 192 L 192
Score = 58.5 bits (140), Expect(2) = 7e-80
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+K+ PVLI CNKTDKVTAH+ EFIRKQLEKEI +LRA
Sbjct: 186 RKKIPVLILCNKTDKVTAHSKEFIRKQLEKEIDKLRA 222
>gb|ESQ40477.1| hypothetical protein EUTSA_v10014432mg [Eutrema salsugineum]
Length = 260
Score = 258 bits (658), Expect(2) = 4e-78
Identities = 129/161 (80%), Positives = 142/161 (88%), Gaps = 1/161 (0%)
Frame = +1
Query: 196 EWLQQGIEYANKIPPTQLYVAAAVLLVT-IFFLLMIRLFKRTKSNTIVLTGLSGAGKTVL 372
+W QGIEY KIPPTQLYVA VLL+T I FLL IRLF+RTKSNT++L+GLSG+GKTVL
Sbjct: 13 QWSHQGIEYLQKIPPTQLYVAIGVLLLTTILFLLSIRLFRRTKSNTVLLSGLSGSGKTVL 72
Query: 373 FYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKIKPVHLVDVPGHSRLRPKLDEFLPQ 552
FYQLRDGS+HQGTVTSMEPNEGTF+L SE +K GKIKPVHLVDVPGHSRLRPKL+EFLPQ
Sbjct: 73 FYQLRDGSSHQGTVTSMEPNEGTFILHSEKAKKGKIKPVHLVDVPGHSRLRPKLEEFLPQ 132
Query: 553 AAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKKVRFL 675
AA IVFVVDALEFLPN R SEYLYDILT A+VVKKK+ L
Sbjct: 133 AAAIVFVVDALEFLPNCRAASEYLYDILTNANVVKKKIPVL 173
Score = 61.2 bits (147), Expect(2) = 4e-78
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+K+ PVL+CCNKTDK+TAHT EFIRKQ+EKEI +LRA
Sbjct: 167 KKKIPVLLCCNKTDKLTAHTKEFIRKQMEKEIEKLRA 203
>ref|XP_004309831.1| PREDICTED: signal recognition particle receptor subunit beta-like
[Fragaria vesca subsp. vesca]
Length = 274
Score = 258 bits (658), Expect(2) = 7e-77
Identities = 130/187 (69%), Positives = 153/187 (81%), Gaps = 2/187 (1%)
Frame = +1
Query: 121 MEGMEQWKNEAKQWL-QHGIEYANQIEWL-QQGIEYANKIPPTQLYVAAAVLLVTIFFLL 294
MEG ++WK +A +WL Q ++ E L Q EY ++PPTQ+Y A AVLL+T +
Sbjct: 1 MEGFDEWKKQADKWLSQASQQWQKHAEPLCSQAQEYIQQVPPTQIYAALAVLLLTSVLFI 60
Query: 295 MIRLFKRTKSNTIVLTGLSGAGKTVLFYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSG 474
+ R FKR K++TI+L+GLSG+GKTVLFYQLRDGSAH GTVTSMEPNEG+FVL SE SK+G
Sbjct: 61 LGRFFKRQKAHTILLSGLSGSGKTVLFYQLRDGSAHLGTVTSMEPNEGSFVLHSEKSKTG 120
Query: 475 KIKPVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVV 654
K+KPVHLVDVPGHSRLRPKLDEFLPQAAG++FVVDALEFLPNLR SEYLYDILTKASVV
Sbjct: 121 KVKPVHLVDVPGHSRLRPKLDEFLPQAAGVIFVVDALEFLPNLRAASEYLYDILTKASVV 180
Query: 655 KKKVRFL 675
KKK+ L
Sbjct: 181 KKKIPVL 187
Score = 57.0 bits (136), Expect(2) = 7e-77
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+K+ PVL+ CNKTDKVTAH+ +FIRKQLEKEI +LRA
Sbjct: 181 KKKIPVLVLCNKTDKVTAHSKDFIRKQLEKEIDKLRA 217
>ref|XP_002265544.2| PREDICTED: signal recognition particle receptor subunit beta-like
[Vitis vinifera] gi|297739076|emb|CBI28565.3| unnamed
protein product [Vitis vinifera]
Length = 259
Score = 256 bits (654), Expect(2) = 7e-77
Identities = 130/185 (70%), Positives = 150/185 (81%)
Frame = +1
Query: 121 MEGMEQWKNEAKQWLQHGIEYANQIEWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMI 300
M+ +EQW+ + +QW + QG E+ +++P TQLY A AV+ VT FFLL I
Sbjct: 1 MDELEQWRIQLQQWSR-------------QGAEWFHQMPETQLYAAIAVVFVTTFFLLSI 47
Query: 301 RLFKRTKSNTIVLTGLSGAGKTVLFYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKI 480
RLFKRTKSNT+VLTGLSG+GKT LFYQL+DGS+H GTVTSM+PNEGTFVL SE +K GKI
Sbjct: 48 RLFKRTKSNTVVLTGLSGSGKTTLFYQLQDGSSHLGTVTSMDPNEGTFVLHSEIAKKGKI 107
Query: 481 KPVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKK 660
KPVH+VDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPN R SEYLYDILTK+SVVKK
Sbjct: 108 KPVHVVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCRAASEYLYDILTKSSVVKK 167
Query: 661 KVRFL 675
K+ L
Sbjct: 168 KIPVL 172
Score = 58.5 bits (140), Expect(2) = 7e-77
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+K+ PVLI CNKTDKVTAHT EFIRKQLEKEI + RA
Sbjct: 166 KKKIPVLILCNKTDKVTAHTKEFIRKQLEKEIEKFRA 202
>ref|XP_002873217.1| signal recognition particle binding protein [Arabidopsis lyrata
subsp. lyrata] gi|297319054|gb|EFH49476.1| signal
recognition particle binding protein [Arabidopsis lyrata
subsp. lyrata]
Length = 260
Score = 250 bits (638), Expect(2) = 7e-76
Identities = 126/161 (78%), Positives = 138/161 (85%), Gaps = 1/161 (0%)
Frame = +1
Query: 196 EWLQQGIEYANKIPPTQLYVAAAVLL-VTIFFLLMIRLFKRTKSNTIVLTGLSGAGKTVL 372
+W QGIEY KIPPTQLY A VLL TI L IRL +RTKSNT++L+GLSG+GKTVL
Sbjct: 13 QWSHQGIEYLQKIPPTQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSGLSGSGKTVL 72
Query: 373 FYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKIKPVHLVDVPGHSRLRPKLDEFLPQ 552
FYQLRDGS+HQGTVTSMEPNEGTFVL SE++K GKIKPVHLVDVPGHSRLRPKL+EFLPQ
Sbjct: 73 FYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLRPKLEEFLPQ 132
Query: 553 AAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKKVRFL 675
AA IVFVVDALEFLPN R SEYLYDILT A+VVKKK+ L
Sbjct: 133 AAAIVFVVDALEFLPNCRAASEYLYDILTNANVVKKKIPVL 173
Score = 61.2 bits (147), Expect(2) = 7e-76
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+K+ PVL+CCNKTDK+TAHT EFIRKQ+EKEI +LRA
Sbjct: 167 KKKIPVLLCCNKTDKLTAHTKEFIRKQMEKEIEKLRA 203
>ref|NP_196186.1| signal recognition particle receptor subunit beta [Arabidopsis
thaliana] gi|42573277|ref|NP_974735.1| signal
recognition particle receptor subunit beta [Arabidopsis
thaliana] gi|9759092|dbj|BAB09661.1| signal recognition
particle receptor beta subunit-like protein [Arabidopsis
thaliana] gi|53850473|gb|AAU95413.1| At5g05670
[Arabidopsis thaliana] gi|55167918|gb|AAV43791.1|
At5g05670 [Arabidopsis thaliana]
gi|222423478|dbj|BAH19709.1| AT5G05670 [Arabidopsis
thaliana] gi|222423982|dbj|BAH19952.1| AT5G05670
[Arabidopsis thaliana] gi|332003523|gb|AED90906.1|
signal recognition particle receptor subunit beta
[Arabidopsis thaliana] gi|332003524|gb|AED90907.1|
signal recognition particle receptor subunit beta
[Arabidopsis thaliana]
Length = 260
Score = 245 bits (626), Expect(2) = 2e-74
Identities = 123/161 (76%), Positives = 137/161 (85%), Gaps = 1/161 (0%)
Frame = +1
Query: 196 EWLQQGIEYANKIPPTQLYVAAAVLL-VTIFFLLMIRLFKRTKSNTIVLTGLSGAGKTVL 372
+W QGIEY KIPP QLY A VLL TI L IRL +RTKSNT++L+GL+G+GKTVL
Sbjct: 13 QWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSGLTGSGKTVL 72
Query: 373 FYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKIKPVHLVDVPGHSRLRPKLDEFLPQ 552
FYQLRDGS+HQGTVTSMEPNEGTFVL SE++K GKIKPVHLVDVPGHSRLRPKL+EFLPQ
Sbjct: 73 FYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLRPKLEEFLPQ 132
Query: 553 AAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKKVRFL 675
AA IVFVVDALEFLPN R SEYLY+ILT A+VVKKK+ L
Sbjct: 133 AAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVL 173
Score = 61.2 bits (147), Expect(2) = 2e-74
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+K+ PVL+CCNKTDK+TAHT EFIRKQ+EKEI +LRA
Sbjct: 167 KKKIPVLLCCNKTDKLTAHTKEFIRKQMEKEIEKLRA 203
>dbj|BAF00102.1| signal recognition particle receptor beta subunit-like protein
[Arabidopsis thaliana]
Length = 249
Score = 243 bits (620), Expect(2) = 9e-74
Identities = 122/161 (75%), Positives = 136/161 (84%), Gaps = 1/161 (0%)
Frame = +1
Query: 196 EWLQQGIEYANKIPPTQLYVAAAVLL-VTIFFLLMIRLFKRTKSNTIVLTGLSGAGKTVL 372
+W QGIEY KIPP QLY A VLL TI L IR +RTKSNT++L+GL+G+GKTVL
Sbjct: 13 QWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRQVRRTKSNTVLLSGLTGSGKTVL 72
Query: 373 FYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKIKPVHLVDVPGHSRLRPKLDEFLPQ 552
FYQLRDGS+HQGTVTSMEPNEGTFVL SE++K GKIKPVHLVDVPGHSRLRPKL+EFLPQ
Sbjct: 73 FYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLRPKLEEFLPQ 132
Query: 553 AAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKKVRFL 675
AA IVFVVDALEFLPN R SEYLY+ILT A+VVKKK+ L
Sbjct: 133 AAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVL 173
Score = 61.2 bits (147), Expect(2) = 9e-74
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+K+ PVL+CCNKTDK+TAHT EFIRKQ+EKEI +LRA
Sbjct: 167 KKKIPVLLCCNKTDKLTAHTKEFIRKQMEKEIEKLRA 203
>gb|EMJ13060.1| hypothetical protein PRUPE_ppa010051mg [Prunus persica]
Length = 266
Score = 244 bits (624), Expect(2) = 2e-73
Identities = 125/185 (67%), Positives = 147/185 (79%)
Frame = +1
Query: 121 MEGMEQWKNEAKQWLQHGIEYANQIEWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMI 300
MEG+EQ K +A + + A Q W Q +EY +++P Q+Y A A+LL T F LL++
Sbjct: 1 MEGLEQLKTQAGRLKK----LAGQ--WSSQALEYVHQVPSEQIYAAVAILLFTSFLLLLV 54
Query: 301 RLFKRTKSNTIVLTGLSGAGKTVLFYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKI 480
RLFKR K+NTI+LTGLSG+GKTVLFYQLRDGS+H GT+TSMEPNEGTFVL SE SK+GK
Sbjct: 55 RLFKRPKANTILLTGLSGSGKTVLFYQLRDGSSHHGTLTSMEPNEGTFVLHSEKSKNGKE 114
Query: 481 KPVHLVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKK 660
PVHL+DVPGHSRLR KLD+ LPQAAGIVFVVDALEFLPN R SEYLYDILTK SVV+K
Sbjct: 115 NPVHLIDVPGHSRLRAKLDDVLPQAAGIVFVVDALEFLPNCRAASEYLYDILTKVSVVRK 174
Query: 661 KVRFL 675
K+ L
Sbjct: 175 KIPVL 179
Score = 58.5 bits (140), Expect(2) = 2e-73
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
+K+ PVLI CNKTDKVTAH+ EFIRKQLEKEI +LRA
Sbjct: 173 RKKIPVLILCNKTDKVTAHSKEFIRKQLEKEIDKLRA 209
>ref|XP_006288480.1| hypothetical protein CARUB_v10001748mg [Capsella rubella]
gi|482557186|gb|EOA21378.1| hypothetical protein
CARUB_v10001748mg [Capsella rubella]
Length = 260
Score = 244 bits (622), Expect(2) = 2e-73
Identities = 122/161 (75%), Positives = 136/161 (84%), Gaps = 1/161 (0%)
Frame = +1
Query: 196 EWLQQGIEYANKIPPTQLYVAAAVLL-VTIFFLLMIRLFKRTKSNTIVLTGLSGAGKTVL 372
+W QGIEY KIPP+QLY A VLL TI L IRL +RTKSNT++L+GLSG+GKTVL
Sbjct: 13 QWSHQGIEYLQKIPPSQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSGLSGSGKTVL 72
Query: 373 FYQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKIKPVHLVDVPGHSRLRPKLDEFLPQ 552
FYQLRDGS+HQGTVTSMEPNEGTFV +E++K GKIKPVHLVDVPGHSRLRPKL+EFLPQ
Sbjct: 73 FYQLRDGSSHQGTVTSMEPNEGTFVFHTENTKKGKIKPVHLVDVPGHSRLRPKLEEFLPQ 132
Query: 553 AAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKKVRFL 675
AA IVFVVDALEFLPN R SEYLYDILT A+VVK K+ L
Sbjct: 133 AAAIVFVVDALEFLPNCRAASEYLYDILTNANVVKNKIPVL 173
Score = 59.3 bits (142), Expect(2) = 2e-73
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +3
Query: 666 PVLICCNKTDKVTAHT*EFIRKQLEKEI*QLRA 764
PVL+CCNKTDK+TAHT EFIRKQ+EKEI +LRA
Sbjct: 171 PVLLCCNKTDKLTAHTKEFIRKQMEKEIEKLRA 203
>ref|XP_002886264.1| signal recognition particle binding protein [Arabidopsis lyrata
subsp. lyrata] gi|297332104|gb|EFH62523.1| signal
recognition particle binding protein [Arabidopsis lyrata
subsp. lyrata]
Length = 259
Score = 236 bits (603), Expect(2) = 4e-71
Identities = 113/160 (70%), Positives = 137/160 (85%)
Frame = +1
Query: 196 EWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMIRLFKRTKSNTIVLTGLSGAGKTVLF 375
+W +QGIE+ +IPP+QLY A VLL+ +LL IRLF+RTKSNT++L+GLSG+GKT+LF
Sbjct: 13 QWWKQGIEFVQQIPPSQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGLSGSGKTMLF 72
Query: 376 YQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKIKPVHLVDVPGHSRLRPKLDEFLPQA 555
YQLRDGS+HQG VTSMEPNEGTFVL +E++ GK+KPVHLVDVPGHSRLR KL+E+LP+A
Sbjct: 73 YQLRDGSSHQGAVTSMEPNEGTFVLHNENTMKGKVKPVHLVDVPGHSRLRSKLEEYLPRA 132
Query: 556 AGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKKVRFL 675
A +VFVVDALEFLPN+R SEYLYDILT SVVK K+ L
Sbjct: 133 AAVVFVVDALEFLPNIRVASEYLYDILTNTSVVKNKIPVL 172
Score = 58.9 bits (141), Expect(2) = 4e-71
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +3
Query: 666 PVLICCNKTDKVTAHT*EFIRKQLEKEI*QLR 761
PVL+CCNKTDKVTAHT EFIRKQ+EKEI +LR
Sbjct: 170 PVLLCCNKTDKVTAHTKEFIRKQMEKEIEKLR 201
>ref|XP_006299761.1| hypothetical protein CARUB_v10015957mg [Capsella rubella]
gi|482568470|gb|EOA32659.1| hypothetical protein
CARUB_v10015957mg [Capsella rubella]
Length = 197
Score = 238 bits (607), Expect(2) = 1e-70
Identities = 115/160 (71%), Positives = 136/160 (85%)
Frame = +1
Query: 196 EWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMIRLFKRTKSNTIVLTGLSGAGKTVLF 375
+W +QGIE+ KIP QLY A AVLL+ +L IR F+RTKSNT++L+GLSG+GKT+LF
Sbjct: 13 QWSKQGIEFVQKIPQPQLYAAIAVLLLATIWLFAIRFFRRTKSNTVLLSGLSGSGKTMLF 72
Query: 376 YQLRDGSAHQGTVTSMEPNEGTFVLSSESSKSGKIKPVHLVDVPGHSRLRPKLDEFLPQA 555
YQLRDGS+HQG VTSMEPNEGTFVL +E++K GK+KPVHLVDVPGHSRLR KL+E+LP+A
Sbjct: 73 YQLRDGSSHQGAVTSMEPNEGTFVLHNENTKKGKVKPVHLVDVPGHSRLRSKLEEYLPRA 132
Query: 556 AGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKKVRFL 675
A +VFVVDALEFLPN+R SEYLYDILT ASVVK KV L
Sbjct: 133 AAVVFVVDALEFLPNIRAASEYLYDILTNASVVKNKVPVL 172
Score = 55.5 bits (132), Expect(2) = 1e-70
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 666 PVLICCNKTDKVTAHT*EFIRKQLEKEI 749
PVL+CCNKTDKVTAHT EFIRKQ+EKE+
Sbjct: 170 PVLLCCNKTDKVTAHTKEFIRKQMEKEM 197
>ref|NP_179467.1| SR-beta domain-containing protein [Arabidopsis thaliana]
gi|4185143|gb|AAD08946.1| putative signal recognition
particle receptor beta subunit [Arabidopsis thaliana]
gi|21553377|gb|AAM62470.1| putative signal recognition
particle receptor beta subunit [Arabidopsis thaliana]
gi|60547709|gb|AAX23818.1| hypothetical protein
At2g18770 [Arabidopsis thaliana]
gi|330251712|gb|AEC06806.1| SR-beta domain-containing
protein [Arabidopsis thaliana]
Length = 260
Score = 233 bits (594), Expect(2) = 2e-70
Identities = 113/161 (70%), Positives = 136/161 (84%), Gaps = 1/161 (0%)
Frame = +1
Query: 196 EWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMIRLFKRTKSNTIVLTGLSGAGKTVLF 375
+W +QG+E+ KIPP QLY A VLL+ +LL IRLF+RTKSNT++L+GLSG+GKTVLF
Sbjct: 13 QWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGLSGSGKTVLF 72
Query: 376 YQLRDGSAHQGTVTSMEPNEGTFVLSSE-SSKSGKIKPVHLVDVPGHSRLRPKLDEFLPQ 552
YQLRDGS+HQG VTSMEPNEGTFVL +E ++K GK+KPVHL+DVPGHSRL KL+E+LP+
Sbjct: 73 YQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLISKLEEYLPR 132
Query: 553 AAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKKVRFL 675
AA +VFVVDALEFLPN+R SEYLYDILT ASV+K K L
Sbjct: 133 AAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVL 173
Score = 60.1 bits (144), Expect(2) = 2e-70
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLR 761
+ ++PVL+CCNKTDKVTAHT EFIRKQ+EKEI +LR
Sbjct: 167 KNKTPVLLCCNKTDKVTAHTKEFIRKQMEKEIDKLR 202
>dbj|BAE99974.1| putative signal recognition particle receptor beta subunit
[Arabidopsis thaliana]
Length = 260
Score = 233 bits (593), Expect(2) = 2e-70
Identities = 112/161 (69%), Positives = 136/161 (84%), Gaps = 1/161 (0%)
Frame = +1
Query: 196 EWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMIRLFKRTKSNTIVLTGLSGAGKTVLF 375
+W +QG+E+ KIPP QLY A VLL+ +LL IRLF+RTKSNT++L+GLSG+GKTVLF
Sbjct: 13 QWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGLSGSGKTVLF 72
Query: 376 YQLRDGSAHQGTVTSMEPNEGTFVLSSE-SSKSGKIKPVHLVDVPGHSRLRPKLDEFLPQ 552
YQLRDGS+HQG VTSMEPNEGTFVL +E ++K GK+KP+HL+DVPGHSRL KL+E+LP+
Sbjct: 73 YQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPIHLIDVPGHSRLISKLEEYLPR 132
Query: 553 AAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKKVRFL 675
AA +VFVVDALEFLPN+R SEYLYDILT ASV+K K L
Sbjct: 133 AAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVL 173
Score = 60.1 bits (144), Expect(2) = 2e-70
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLR 761
+ ++PVL+CCNKTDKVTAHT EFIRKQ+EKEI +LR
Sbjct: 167 KNKTPVLLCCNKTDKVTAHTKEFIRKQMEKEIDKLR 202
>gb|AAU44447.1| hypothetical protein AT2G18770 [Arabidopsis thaliana]
Length = 260
Score = 231 bits (589), Expect(2) = 7e-70
Identities = 112/161 (69%), Positives = 136/161 (84%), Gaps = 1/161 (0%)
Frame = +1
Query: 196 EWLQQGIEYANKIPPTQLYVAAAVLLVTIFFLLMIRLFKRTKSNTIVLTGLSGAGKTVLF 375
+W +QG+E+ KIPP QLY A VLL+ +LL IRLF+RTKS+T++L+GLSG+GKTVLF
Sbjct: 13 QWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSDTVLLSGLSGSGKTVLF 72
Query: 376 YQLRDGSAHQGTVTSMEPNEGTFVLSSE-SSKSGKIKPVHLVDVPGHSRLRPKLDEFLPQ 552
YQLRDGS+HQG VTSMEPNEGTFVL +E ++K GK+KPVHL+DVPGHSRL KL+E+LP+
Sbjct: 73 YQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLISKLEEYLPR 132
Query: 553 AAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKKKVRFL 675
AA +VFVVDALEFLPN+R SEYLYDILT ASV+K K L
Sbjct: 133 AAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVL 173
Score = 60.1 bits (144), Expect(2) = 7e-70
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = +3
Query: 654 QKESPVLICCNKTDKVTAHT*EFIRKQLEKEI*QLR 761
+ ++PVL+CCNKTDKVTAHT EFIRKQ+EKEI +LR
Sbjct: 167 KNKTPVLLCCNKTDKVTAHTKEFIRKQMEKEIDKLR 202