BLASTX nr result
ID: Jatropha_contig00025886
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00025886
(178 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta... 67 2e-09
gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus... 64 2e-08
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein... 64 2e-08
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 64 2e-08
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao... 62 7e-08
ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein... 62 1e-07
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein... 61 2e-07
ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein... 61 2e-07
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein... 61 2e-07
ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like ... 61 2e-07
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe... 60 2e-07
ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Caps... 60 4e-07
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th... 59 5e-07
ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp.... 59 5e-07
gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana] 59 5e-07
gb|ESQ29352.1| hypothetical protein EUTSA_v10023338mg [Eutrema s... 59 6e-07
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein... 59 6e-07
gb|EEE97240.2| plus-3 domain-containing family protein [Populus ... 59 8e-07
ref|XP_002316628.1| PAF1 complex component [Populus trichocarpa] 59 8e-07
gb|ESR36142.1| hypothetical protein CICLE_v10028000mg [Citrus cl... 58 1e-06
>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
gi|223541691|gb|EEF43239.1| RNA polymerase-associated
protein RTF1, putative [Ricinus communis]
Length = 660
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDRPYKLENKTTYKYLN IWGNESSAAR MAM+
Sbjct: 330 PDRPYKLENKTTYKYLNVIWGNESSAARWQMAMI 363
>gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
Length = 654
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDR YKLENKTTYKYLN +WGNESSAAR MAMV
Sbjct: 329 PDRQYKLENKTTYKYLNVVWGNESSAARWQMAMV 362
>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDR YKLENKTTYKYLN +WGNESSAAR MAMV
Sbjct: 328 PDRQYKLENKTTYKYLNVVWGNESSAARWQMAMV 361
>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDR YKLENKTTYKYLN +WGNESSAAR MAMV
Sbjct: 328 PDRQYKLENKTTYKYLNVVWGNESSAARWQMAMV 361
>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
gi|508781058|gb|EOY28314.1| PAF1 complex component
isoform 1 [Theobroma cacao]
Length = 660
Score = 62.0 bits (149), Expect = 7e-08
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
P+R YKLENKTTYKYLN +WGNESSAAR MAM+
Sbjct: 332 PERTYKLENKTTYKYLNVVWGNESSAARWQMAMI 365
>ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Cicer arietinum] gi|502110282|ref|XP_004493843.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Cicer arietinum]
Length = 653
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDR YKL+NKTTYKYLN +WGNE+SAAR MAMV
Sbjct: 325 PDRQYKLDNKTTYKYLNVVWGNETSAARWQMAMV 358
>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Cicer arietinum] gi|502142571|ref|XP_004505023.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Cicer arietinum]
Length = 658
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDR YKLEN+TT+KYLN +WGNESSAAR MAMV
Sbjct: 330 PDRQYKLENRTTHKYLNVVWGNESSAARWQMAMV 363
>ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 619
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDR YKLENKTT+KYLN +WGNE+SAAR MAMV
Sbjct: 327 PDRQYKLENKTTHKYLNVVWGNENSAARWQMAMV 360
>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 657
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDR YKLENKTT+KYLN +WGNE+SAAR MAMV
Sbjct: 327 PDRQYKLENKTTHKYLNVVWGNENSAARWQMAMV 360
>ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like protein [Medicago
truncatula] gi|355500443|gb|AES81646.1| RNA
polymerase-associated protein RTF1-like protein
[Medicago truncatula]
Length = 624
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDR YKL+NKTTYKYLN +WGNE+SAAR MAMV
Sbjct: 302 PDRLYKLDNKTTYKYLNVVWGNETSAARWQMAMV 335
>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDR YKLENKTT+KYLN +WGNE+SAAR MAM+
Sbjct: 316 PDRKYKLENKTTHKYLNVVWGNENSAARWQMAMI 349
>ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Capsella rubella]
gi|482569554|gb|EOA33742.1| hypothetical protein
CARUB_v10019938mg [Capsella rubella]
Length = 644
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PD+ YKLENKTT+KYLN IWGNE+SAAR MAM+
Sbjct: 322 PDKTYKLENKTTHKYLNVIWGNETSAARWQMAMI 355
>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
78902-80833 [Arabidopsis thaliana]
gi|332195649|gb|AEE33770.1| Paf1C-like transcription
factor [Arabidopsis thaliana]
Length = 643
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PD+ YKLENKTT+KYLN +WGNE+SAAR MAM+
Sbjct: 321 PDKTYKLENKTTHKYLNVVWGNETSAARWQMAMI 354
>ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
gi|297333952|gb|EFH64370.1| At1g61040/T7P1_17
[Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PD+ YKLENKTT+KYLN +WGNE+SAAR MAM+
Sbjct: 321 PDKTYKLENKTTHKYLNVVWGNETSAARWQMAMI 354
>gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]
Length = 643
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PD+ YKLENKTT+KYLN +WGNE+SAAR MAM+
Sbjct: 321 PDKTYKLENKTTHKYLNVVWGNETSAARWQMAMI 354
>gb|ESQ29352.1| hypothetical protein EUTSA_v10023338mg [Eutrema salsugineum]
Length = 644
Score = 58.9 bits (141), Expect = 6e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PD+ YKLENKTT+KYLN IWG+ESSAAR MAM+
Sbjct: 323 PDKTYKLENKTTHKYLNCIWGHESSAARWQMAMI 356
>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
polymerase-associated protein RTF1 homolog [Cucumis
sativus]
Length = 660
Score = 58.9 bits (141), Expect = 6e-07
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDR YKLENK T+KYLN IWGNE+SAAR MAMV
Sbjct: 331 PDRQYKLENKITHKYLNVIWGNEASAARWQMAMV 364
>gb|EEE97240.2| plus-3 domain-containing family protein [Populus trichocarpa]
Length = 664
Score = 58.5 bits (140), Expect = 8e-07
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PD+PYKLENK+TYKYLN WG +SSAAR MAMV
Sbjct: 333 PDKPYKLENKSTYKYLNVTWGADSSAARWQMAMV 366
>ref|XP_002316628.1| PAF1 complex component [Populus trichocarpa]
Length = 664
Score = 58.5 bits (140), Expect = 8e-07
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PD+PYKLENK+TYKYLN WG +SSAAR MAMV
Sbjct: 333 PDKPYKLENKSTYKYLNVTWGADSSAARWQMAMV 366
>gb|ESR36142.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
Length = 643
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +2
Query: 77 PDRPYKLENKTTYKYLNAIWGNESSAARRPMAMV 178
PDR YKLEN+TT KYLN WGNESSAAR MAMV
Sbjct: 317 PDRSYKLENRTTCKYLNVTWGNESSAARWQMAMV 350